EY659383
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659383 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 5.409e-43 Identity = 97/208 (46.63%), Postives = 130/208 (62.50%), Query Frame = 2 Query: 251 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIQNGRLAMFAMLGFFLQLMSQVKGPVRT-C*HLSDPFAN 856 W+GPD +L E P YLTGE PGDYG+D GLS P+ F+K + E+IH+RWAMLGA G + PE ++ G G EAVWFK G+ + L+Y G + + A+ A +++L+G E YRI G ++ D L+PGG FDPLGLA+ P+ FA LKVKE++NGRLAMF+M GFF+ + KGP+ HL+DP N Sbjct: 12 WHGPDGVKYLGPF---SGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEVPEAFAELKVKELKNGRLAMFSMFGFFVPAIVTGKGPLENLADHLADPVNN 215
BLAST of EY659383 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.574e-42 Identity = 93/190 (48.95%), Postives = 124/190 (65.26%), Query Frame = 2 Query: 305 EIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIQNGRLAMFAMLGFFLQLMSQVKGPVRT-C*HLSDPFAN 856 E P YLTGE PGDYG+D GLS P+ F+K + E+IH+ WAMLGA G + PE ++ G G EAVWFK G+ + L+Y G ++ + A+ A ++VL+G E YRI G ++ D ++PGG FDPLGLA DP+ FA LKVKE++NGRLAMF+M GFF+Q + KGP+ HL+DP N Sbjct: 5 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLSRNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 193
BLAST of EY659383 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.740e-41 Identity = 99/209 (47.37%), Postives = 127/209 (60.77%), Query Frame = 2 Query: 251 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITN--GLDLEDKLHPGGP-FDPLGLAKDPDQFALLKVKEIQNGRLAMFAMLGFFLQLMSQVKGPVRT-C*HLSDPFAN 856 WYGPDR +L ++ P YL GE PGDYG+D GLS P+ F+K +A E+IH RWAMLGA G I PE K+ E VWFK G+ + L+Y G + + AV+ ++VL+G E +RI G+ + L+PGG FDPLGLA DP FA LKVKEI+NGRLAMF+M GFF+Q + KGP+ HL +P AN Sbjct: 47 WYGPDRVKYLGPF---SAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVAN 252
BLAST of EY659383 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.968e-41 Identity = 100/210 (47.62%), Postives = 129/210 (61.43%), Query Frame = 2 Query: 251 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGLD---LEDKLHPGGP-FDPLGLAKDPDQFALLKVKEIQNGRLAMFAMLGFFLQLMSQVKGPVRTC-*HLSDPFAN 856 WYGPDR +L ++ P YL GE PGDYG+D GLS P+ F++ +A E+IH RWAMLGA G + PE K+ E VWFK G+ + L+Y G + + AV+ +++L+G E +RI NGLD + L+PGG FDPLGLA DP FA LKVKEI+NGRLAMF+M GFF+Q + KGP+ HL DP AN Sbjct: 50 WYGPDRVKYLGPF---SAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRI-NGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDDPVAN 255
BLAST of EY659383 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 5.063e-41 Identity = 98/210 (46.67%), Postives = 125/210 (59.52%), Query Frame = 2 Query: 248 KWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAF-NKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPI---NLVFAVIAEIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIQNGRLAMFAMLGFFLQLMSQVKGPVRT-C*HLSDPFAN 856 ++YGPD G + + P TGE PGDYG+D GLS P+ F +Y+ ELIHAR +LGA G + PE ++ G G A+WFK GA + LNY G I N+V + ++VL+G E YR+ G E D L+PG FDPLGLA DPD FA LKVKEI+NGRLAMFA LGFF+Q + KGP+ HL++P N Sbjct: 56 QFYGPDAT----SGWDLQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYRVNGGPAGEGLDPLYPGEAFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPIENLTDHLANPAEN 261
BLAST of EY659383 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.247e-39 Identity = 94/208 (45.19%), Postives = 127/208 (61.06%), Query Frame = 2 Query: 251 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIQNGRLAMFAMLGFFLQLMSQVKGPVRT-C*HLSDPFAN 856 WYG DR ++L G L S P YLTGE PGDYG+D GLS P+ F+K + E+IH RWA+ G + PE + G G E VWFK G+ + L++ G ++ + A+ A ++VL+G E Y + G ++ D L+ GG FDPLGL DP++FA LKVKEI+NGRLAMF+M GFF+Q + KGP+ HL+DP N Sbjct: 48 WYGADRVLYL--GPLSGSP-PSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGCVFPELLARNGVKFG-EGVWFKAGSQIFSEGGLSHPGNPSLVHAQSILAIWACQVVLMGAVEGYHVAGGRLGEVVDPLYLGGSFDPLGLGDDPERFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLTDPVNN 251
BLAST of EY659383 vs. ExPASy Swiss-Prot
Match: CB22_SOYBN (Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 2.352e-38 Identity = 94/208 (45.19%), Postives = 124/208 (59.62%), Query Frame = 2 Query: 251 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINL--VFAVIA-EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIQNGRLAMFAMLGFFLQLMSQVKGPVRT-C*HLSDPFAN 856 WYGPDR +L E P YLTGE GLS P+ F+K + E+IH+RWAMLGA G + PE + G G EAVWFK G+ + L+Y G I+ + A+ A +++L+G E YRI G ++ D ++PGG FDPLGLA DP+ A LKVKE++NGRLAMF+M GFF+Q + KGP+ HL+DP N Sbjct: 48 WYGPDRVKYLGPF---SGEAPSYLTGEF--------HGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEALAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 243
BLAST of EY659383 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.335e-33 Identity = 81/168 (48.21%), Postives = 106/168 (63.10%), Query Frame = 2 Query: 305 EIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAV-IAEIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIQNGRLAMFAMLGFFLQ 793 E P YLTGE PGDYG+D GLS P+ F+K + E+IH+R AM A G I PE + G G EAVWFK GA + L+Y G + + A+ +++L+G E YRI G ++ D L+PG FD LGLA+D + FA LKVKE++NGRLAMF+M GFF+Q Sbjct: 68 EWPSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPELLSVMGQGFG-EAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWTTKVILMGAVEGYRIARGPLGEVTDPLYPGS-FDSLGLAEDTEAFAELKVKELKNGRLAMFSMFGFFVQ 233
BLAST of EY659383 vs. ExPASy Swiss-Prot
Match: CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 1.250e-31 Identity = 79/165 (47.88%), Postives = 100/165 (60.61%), Query Frame = 2 Query: 251 WYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFA--VIA----EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQF 721 WYGPDR +L + P YLTGE PGDYG+D GLS P+ F+K + E+IH RWAMLGA G + PE K G G EAVWFK G+ + L+Y G NLV A ++A ++VL+G E YR+ G E D+L+PGG FDPLGLA+DP+ F Sbjct: 48 WYGPDRPKYLGPF---SEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFG-EAVWFKAGSQIFQEGGLDYLGNP---NLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDQLYPGGAFDPLGLAEDPEAF 205
BLAST of EY659383 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 9.904e-29 Identity = 74/185 (40.00%), Postives = 104/185 (56.22%), Query Frame = 2 Query: 311 PEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIA-EIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIQNGRLAMFAMLGFFLQLMSQV-KGPVRT-C*HLSDPFAN 856 P YL G PGD+G+D GL + P + +Y+ ELIH RWAML G I+PEA N W + G Y G+ +P + ++A E + + E+ R + D E K +PGG FDPLG +KDP +F LKVKEI+NGRLA+ A++GF +Q + + GP+ HL+DP+ N Sbjct: 56 PSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGL--GNWVKAQEW-----AAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQR-SMEKDSEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLATHLADPWHN 232 The following BLAST results are available for this feature:
BLAST of EY659383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659383 ID=EY659383; Name=EY659383; organism=Citrus sinensis; type=EST; length=876bpback to top |