EY659383
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659383 vs. ExPASy Swiss-Prot
Match: CB22_PINSY (Chlorophyll a-b binding protein type 2 member 2 (Fragment) OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.532e-21 Identity = 66/134 (49.25%), Postives = 82/134 (61.19%), Query Frame = 2 Query: 473 KFGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVFAVIA-EIVLVGGAEYYRITNGLDLE--DKLHPGGPFDPLGLAKDPDQFALLKVKEIQNGRLAMFAMLGFFLQLMSQVKGPVRTC-*HLSDPFAN 856 KFG EAVWFK GA + L+Y G I + A+ A ++VL+G E YR+ G E D L+PG FDPLGLA DP+ A LKVKEI+NGRLAMF+M GFF+Q + KGP+ HL+DP AN Sbjct: 9 KFG-----EAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLYPGDAFDPLGLADDPEAKAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVAN 137
BLAST of EY659383 vs. ExPASy Swiss-Prot
Match: CB29_CHLRE (Chlorophyll a-b binding protein CP29 OS=Chlamydomonas reinhardtii GN=Lhcb4 PE=1 SV=3) HSP 1 Score: 103.219 bits (256), Expect = 2.000e-21 Identity = 71/228 (31.14%), Postives = 108/228 (47.37%), Query Frame = 2 Query: 311 PEYLTGEVPGDYGYDPFGLSKK------------------------------PDDFS---------------KYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQFAL-LKVKEIQNGRLAMFAMLGFFLQLMSQVKGPVRTC*HLSDPFAN 856 PE+L G +PGD G+DP GLSK PD+ S +++ ELIH RWAML G ++ EA W + G + LDG +Y G ++P ++ + E++LVGGAE+YR + + E + +PGG FDPL LA + ++ A LK EI++ RLAM + G+ +Q +S +G + + +D N Sbjct: 60 PEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQATPDEVSSENRLAPYSEVFGLARFRECELIHGRWAMLACLGALVAEATTGVS--------WVEAGKVELDG--ASYAGLSLPFSITQLIWIEVILVGGAEFYR-NSETNPEKRCYPGGVFDPLKLASEDEERAFRLKTAEIKHARLAMVSFFGYGVQALSTGEGALGSLAKFADGLNN 276
BLAST of EY659383 vs. ExPASy Swiss-Prot
Match: CB2D_SOLLC (Chlorophyll a-b binding protein 1D (Fragment) OS=Solanum lycopersicum GN=CAB1D PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.193e-19 Identity = 50/89 (56.18%), Postives = 64/89 (71.91%), Query Frame = 2 Query: 599 EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIQNGRLAMFAMLGFFLQLMSQVKGPVRT-C*HLSDPFAN 856 ++VL+G E YRI G ++ D L+PGG FDPLGLA+DP+ FA LKVKEI+NGRLAMF+M GFF+Q + KGP+ HL+DP N Sbjct: 15 QVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 103
BLAST of EY659383 vs. ExPASy Swiss-Prot
Match: CB2C_SOLLC (Chlorophyll a-b binding protein 1C, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1C PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.193e-19 Identity = 50/89 (56.18%), Postives = 64/89 (71.91%), Query Frame = 2 Query: 599 EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIQNGRLAMFAMLGFFLQLMSQVKGPVRT-C*HLSDPFAN 856 ++VL+G E YRI G ++ D L+PGG FDPLGLA+DP+ FA LKVKEI+NGRLAMF+M GFF+Q + KGP+ HL+DP N Sbjct: 164 QVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 252
BLAST of EY659383 vs. ExPASy Swiss-Prot
Match: CB2A_SOLLC (Chlorophyll a-b binding protein 1A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB1A PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.193e-19 Identity = 50/89 (56.18%), Postives = 64/89 (71.91%), Query Frame = 2 Query: 599 EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIQNGRLAMFAMLGFFLQLMSQVKGPVRT-C*HLSDPFAN 856 ++VL+G E YRI G ++ D L+PGG FDPLGLA+DP+ FA LKVKEI+NGRLAMF+M GFF+Q + KGP+ HL+DP N Sbjct: 164 QVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 252
BLAST of EY659383 vs. ExPASy Swiss-Prot
Match: CB2F_SOLLC (Chlorophyll a-b binding protein 3B, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3B PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.447e-19 Identity = 49/89 (55.06%), Postives = 64/89 (71.91%), Query Frame = 2 Query: 599 EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIQNGRLAMFAMLGFFLQLMSQVKGPVRT-C*HLSDPFAN 856 ++VL+G E YRI G ++ D L+PGG FDPLGLA+DP+ FA LKVKEI+NGRLAMF+M GFF+Q + KGP+ H++DP N Sbjct: 166 QVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNN 254
BLAST of EY659383 vs. ExPASy Swiss-Prot
Match: CB2E_SOLLC (Chlorophyll a-b binding protein 3A, chloroplastic (Fragments) OS=Solanum lycopersicum GN=CAB3A PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.447e-19 Identity = 49/89 (55.06%), Postives = 64/89 (71.91%), Query Frame = 2 Query: 599 EIVLVGGAEYYRITNGL--DLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIQNGRLAMFAMLGFFLQLMSQVKGPVRT-C*HLSDPFAN 856 ++VL+G E YRI G ++ D L+PGG FDPLGLA+DP+ FA LKVKEI+NGRLAMF+M GFF+Q + KGP+ H++DP N Sbjct: 166 QVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNN 254
BLAST of EY659383 vs. ExPASy Swiss-Prot
Match: CB21_EUGGR (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.022e-18 Identity = 54/107 (50.47%), Postives = 68/107 (63.55%), Query Frame = 2 Query: 575 NLVFAVIAEIVLVGGAEYYRITN------GLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIQNGRLAMFAMLGFFLQLMSQVKGPVRT-C*HLSDPFANTCLRDL 874 +L+ + +++L+G E YR N G DL D+L+PGGPFDPLGLA DPD F LKVKEI+NGRLAM MLGF+ Q + +GPV HL DP A+ L L Sbjct: 10 SLLAILATQVLLMGAVEGYRAGNTAPGQFGEDL-DRLYPGGPFDPLGLADDPDTFPELKVKEIKNGRLAMSGMLGFYAQAIVTGEGPVENWLYHLQDPSAHNGLTAL 115
BLAST of EY659383 vs. ExPASy Swiss-Prot
Match: CB21_RAPSA (Chlorophyll a-b binding of LHCII type 1 protein (Fragment) OS=Raphanus sativus PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.937e-16 Identity = 46/90 (51.11%), Postives = 59/90 (65.56%), Query Frame = 2 Query: 599 EIVLVGGAEYYRITNGLDL---EDKLHPGGPFDPLGLAKDPDQFALLKVKEIQNGRLAMFAMLGFFLQLMSQVKGPVRT-C*HLSDPFAN 856 +++L+G E YR+ L ED L+PGG FDPL DP+ FA LKVKEI+NGRLAMF+M GFF+Q + KGP+ HL+DP N Sbjct: 22 QVILMGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLASLTDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNN 111
BLAST of EY659383 vs. ExPASy Swiss-Prot
Match: LH18_EUGGR (Light-harvesting complex I LH38 proteins (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.813e-14 Identity = 57/187 (30.48%), Postives = 87/187 (46.52%), Query Frame = 2 Query: 302 SEIPEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYRITNGLDLE----DKLHPGGPFDPLGLAKDPDQFALLKVKEIQNGRLAMFAMLGFFLQLMSQVKGPV-RTC*HLSDP 847 +E P LTGE P D G+DP L+ PD +++ + E+ H R AML G I+PE K WF+ G +DG L + + + EY+R G + + D+ +PG FDPL L D + E++NGRLA+ A+ G Q ++ + P+ HL++P Sbjct: 194 AEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELLGK--------GAWFEAGD-SVDGLKLGFI--------------TMAIAAPTEYWRGQGGFNWQKGELDRSYPG--FDPLNLTTD-----YTRAAEVKNGRLALTAVAGLTAQYLATGESPLANLSAHLANP 350 HSP 2 Score: 76.2554 bits (186), Expect = 2.618e-13 Identity = 59/175 (33.71%), Postives = 80/175 (45.71%), Query Frame = 2 Query: 311 PEYLTGEVPGDYGYDPFGLSKKPDDFSKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVFAVIAEIVLVGGAEYYR-----ITNGLDLEDKLHPGGPFDPLGLAKDPDQFALLKVKEIQNGRLAMFAMLGFFLQLMSQVKGPV 820 P YLTGE GD G+DP GL+ P F + Q E+ H R +ML G ++PE WF+ + D N FAV+A + +V EY+R + N + D+ +PG FDPL L + K EI+NGRLAM M G +Q K P+ Sbjct: 381 PRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELLG--------NGAWFQ----IWDKVDFNR----------FAVVA-LQVVAPLEYWRGNGGFLWNDEETVDQSYPG--FDPLNLTTE-----YTKEAEIKNGRLAMNGMFGLEVQSHVTGKSPI 525 The following BLAST results are available for this feature:
BLAST of EY659383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659383 ID=EY659383; Name=EY659383; organism=Citrus sinensis; type=EST; length=876bpback to top |