EY659377

Overview
NameEY659377
Unique NameEY659377
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length939
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659377 vs. ExPASy Swiss-Prot
Match: IDHB_DICDI (Isocitrate dehydrogenase [NAD] regulatory subunit B, mitochondrial OS=Dictyostelium discoideum GN=idhB PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.704e-29
Identity = 76/198 (38.38%), Postives = 107/198 (54.04%), Query Frame = 1
Query:  250 FSSDITPITATLFPGDGIGPEIAESVKQVFRTAEVPVDWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDD--VNLITIRENTEGEYSGLEHQXXXXXXXXXXXXXXXXXXXXXXNMXFTMRRPWEEKSILHTQSNIMQKTDGLFLKWCPEVAQ 837
            ++S +   T T+ PGDGIGPEI  SV  VF+ A+VP++WE        D      ++ E + S+ RNKV LKGP+ T I  G +S N+ LRK L+LYA+V PC  +PG   R+DD  V+ + IRENT+GEYSGLE                              +    +K     ++NI ++TDGLFL  C ++A+
Sbjct:   23 YTSGVQKKTVTVIPGDGIGPEITSSVMGVFQAAKVPIEWEI------FDISGGQPISQELIASITRNKVALKGPLYTEILSGSQSRNMELRKALDLYAHVVPCKQIPGITARHDDVLVDFVVIRENTQGEYSGLEQVLTPGVVQSLKIITKEASERIARYAFEYAKANGRKKVTAVHKANIQKQTDGLFLATCTQIAK 214          
BLAST of EY659377 vs. ExPASy Swiss-Prot
Match: IDH3G_RAT (Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial OS=Rattus norvegicus GN=Idh3g PE=2 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.884e-28
Identity = 76/189 (40.21%), Postives = 103/189 (54.50%), Query Frame = 1
Query:  274 TATLFPGDGIGPEIAESVKQVFRTAEVPVDWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMAT--PIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVNLITIRENTEGEYSGLEHQXXXXXXXXXXXXXXXXXXXXXXNMXFTMRRPWEEKSILHTQSNIMQKTDGLFLKWCPEVA 834
            T T+ PGDGIGPE+   VK VFR A VPVD+EE +V +  D          ++ ++RRN+V LKG + T   +   H+S N  LR  L+LYANV  C SLPG  TR+ D++++ +RENTEGEYS LEH+                            +    +K     ++NIM+  DGLFL+ C EVA
Sbjct:   56 TVTMIPGDGIGPELMLHVKSVFRHACVPVDFEEVHVSSNADEEDIR----NAIMAIRRNRVALKGNIETNHDLPPSHKSRNNILRTSLDLYANVIHCKSLPGVVTRHKDIDILIVRENTEGEYSSLEHESVAGVVESLKIITKAKSLRIAEYAFKLAQESGRKKVTAVHKANIMKLGDGLFLQCCREVA 240          
BLAST of EY659377 vs. ExPASy Swiss-Prot
Match: IDH3G_MOUSE (Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial OS=Mus musculus GN=Idh3g PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.461e-28
Identity = 76/189 (40.21%), Postives = 103/189 (54.50%), Query Frame = 1
Query:  274 TATLFPGDGIGPEIAESVKQVFRTAEVPVDWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATP--IGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVNLITIRENTEGEYSGLEHQXXXXXXXXXXXXXXXXXXXXXXNMXFTMRRPWEEKSILHTQSNIMQKTDGLFLKWCPEVA 834
            T T+ PGDGIGPE+   VK VFR A VPVD+EE +V +  D          ++ ++RRN+V LKG + T   +   H+S N  LR  L+LYANV  C SLPG  TR+ D++++ +RENTEGEYS LEH+                            +    +K     ++NIM+  DGLFL+ C EVA
Sbjct:   56 TVTMIPGDGIGPELMLHVKSVFRHACVPVDFEEVHVSSNADEEDIR----NAIMAIRRNRVALKGNIETNHNLPPSHKSRNNILRTSLDLYANVIHCKSLPGVVTRHKDIDILIVRENTEGEYSSLEHESVAGVVESLKIITKAKSLRIAEYAFKLAQESGRKKVTAVHKANIMKLGDGLFLQCCREVA 240          
BLAST of EY659377 vs. ExPASy Swiss-Prot
Match: IDH3G_MACFA (Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial (Fragment) OS=Macaca fascicularis GN=IDH3G PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.461e-28
Identity = 76/189 (40.21%), Postives = 103/189 (54.50%), Query Frame = 1
Query:  274 TATLFPGDGIGPEIAESVKQVFRTAEVPVDWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATP--IGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVNLITIRENTEGEYSGLEHQXXXXXXXXXXXXXXXXXXXXXXNMXFTMRRPWEEKSILHTQSNIMQKTDGLFLKWCPEVA 834
            T T+ PGDGIGPE+   VK VFR A VPVD+EE +V +  D          ++ ++RRN+V LKG + T   +   H+S N  LR  L+LYANV  C SLPG  TR+ D++++ +RENTEGEYS LEH+                            +    +K     ++NIM+  DGLFL+ C EVA
Sbjct:   18 TVTMIPGDGIGPELMLHVKSVFRHACVPVDFEEVHVSSNADEEDIR----NAIMAIRRNRVALKGNIETNHNLPPSHKSRNNILRTSLDLYANVIHCKSLPGVVTRHKDIDILIVRENTEGEYSSLEHESVAGVVESLKIITKAKSLRIAEYAFKLAQESGRKKVTAVHKANIMKLGDGLFLQCCREVA 202          
BLAST of EY659377 vs. ExPASy Swiss-Prot
Match: IDH3G_HUMAN (Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial OS=Homo sapiens GN=IDH3G PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.461e-28
Identity = 76/189 (40.21%), Postives = 103/189 (54.50%), Query Frame = 1
Query:  274 TATLFPGDGIGPEIAESVKQVFRTAEVPVDWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATP--IGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVNLITIRENTEGEYSGLEHQXXXXXXXXXXXXXXXXXXXXXXNMXFTMRRPWEEKSILHTQSNIMQKTDGLFLKWCPEVA 834
            T T+ PGDGIGPE+   VK VFR A VPVD+EE +V +  D          ++ ++RRN+V LKG + T   +   H+S N  LR  L+LYANV  C SLPG  TR+ D++++ +RENTEGEYS LEH+                            +    +K     ++NIM+  DGLFL+ C EVA
Sbjct:   56 TVTMIPGDGIGPELMLHVKSVFRHACVPVDFEEVHVSSNADEEDIR----NAIMAIRRNRVALKGNIETNHNLPPSHKSRNNILRTSLDLYANVIHCKSLPGVVTRHKDIDILIVRENTEGEYSSLEHESVAGVVESLKIITKAKSLRIAEYAFKLAQESGRKKVTAVHKANIMKLGDGLFLQCCREVA 240          
BLAST of EY659377 vs. ExPASy Swiss-Prot
Match: IDH2_ARATH (Isocitrate dehydrogenase [NAD] regulatory subunit 2, mitochondrial OS=Arabidopsis thaliana GN=IDH2 PE=1 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 2.461e-28
Identity = 72/193 (37.31%), Postives = 107/193 (55.44%), Query Frame = 1
Query:  259 DITPITATLFPGDGIGPEIAESVKQVFRTAEVPVDWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVNLITIRENTEGEYSGLEHQXXXXXXXXXXXXXXXXXXXXXXNMXFTMRRPWEEKSILHTQSNIMQKTDGLFLKWCPEVAQ 837
            D  P   TL PGDG+GP +  +V+QV      PV +E   V  ++    +  L     ES+++NKV LKG + TP+G G  SLN+ LRKEL+L+A++  C++LPG  +R+++V+++ IRENTEGEY+GLEH+                                 +K     ++NIM+  DGLFL+ C EVA+
Sbjct:   34 DGKPRPVTLIPGDGVGPLVTNAVQQVMEAMHAPVYFEPFEVHGDMKSLPEGLL-----ESIKKNKVCLKGGLKTPVGGGVSSLNVNLRKELDLFASLVNCFNLPGLASRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCQEVAK 221          
BLAST of EY659377 vs. ExPASy Swiss-Prot
Match: IDH1_KLULA (Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial OS=Kluyveromyces lactis GN=IDH1 PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.214e-28
Identity = 74/192 (38.54%), Postives = 108/192 (56.25%), Query Frame = 1
Query:  274 TATLFPGDGIGPEIAESVKQVFRTAEVPVDWEEHYV-GTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIGK-GHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVNLITIRENTEGEYSGLEHQ-XXXXXXXXXXXXXXXXXXXXXXNMXFTMRRPWEEKSILHTQSNIMQKTDGLFLKWCPEVAQN 840
            T TL PGDG+G E+ +SV ++F    +P+DWE   + G E     Q      ++ES++RNKVGLKG   TP  + GH SLN+ LRK+L+++ANV    S+PG KTR ++++++ IRENTEGEYSGLEH+                          F ++   +    +H ++NIM+  DGLF     E+  N
Sbjct:   31 TVTLIPGDGVGKEVTDSVVKIFENENIPIDWETIDISGLENTENVQ-----RAVESLKRNKVGLKGIWHTPADQTGHGSLNVALRKQLDIFANVALFKSIPGVKTRLNNIDMVIIRENTEGEYSGLEHESVPGVVESLKIMTRAKSERIARFAFDFALKNNRKSVCAVH-KANIMKLGDGLFRNTVNEIGAN 216          
BLAST of EY659377 vs. ExPASy Swiss-Prot
Match: IDH3G_BOVIN (Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial OS=Bos taurus GN=IDH3G PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.197e-28
Identity = 76/189 (40.21%), Postives = 103/189 (54.50%), Query Frame = 1
Query:  274 TATLFPGDGIGPEIAESVKQVFRTAEVPVDWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATP--IGKGHRSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVNLITIRENTEGEYSGLEHQXXXXXXXXXXXXXXXXXXXXXXNMXFTMRRPWEEKSILHTQSNIMQKTDGLFLKWCPEVA 834
            T T+ PGDGIGPE+   VK VFR A VPVD+EE +V +  D          ++ ++RRN+V LKG + T   +   H+S N  LR  L+LYANV  C SLPG  TR+ D++++ +RENTEGEYS LEH+                            +    +K     ++NIM+  DGLFL+ C EVA
Sbjct:   55 TVTMIPGDGIGPELMLHVKSVFRHACVPVDFEEVHVSSTADEEDIR----NAIMAIRRNRVALKGNIETNHNLPPSHKSRNNILRTSLDLYANVIHCKSLPGVVTRHRDIDILIVRENTEGEYSSLEHESVAGVVESLKIITKAKSLRIAEYAFQLAQESGRKKVTAVHKANIMKLGDGLFLQCCREVA 239          
BLAST of EY659377 vs. ExPASy Swiss-Prot
Match: IDH3B_BOVIN (Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Bos taurus GN=IDH3B PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 2.721e-27
Identity = 75/207 (36.23%), Postives = 117/207 (56.52%), Query Frame = 1
Query:  280 TLFPGDGIGPEIAESVKQVFRTAEVPVDWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIG-KGH-RSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVNLITIRENTEGEYSGLEHQXXXXXXXXXXXXXXXXXXXXXXNMXFTMRRPWEEKSILHTQSNIMQKTDGLFLKWCPEVAQNTLR*HMKK-VYQHCWMML 891
            T+ PGDG+GPE+  +VK+VF+ A VPV+++EH++ +E+          + L S++ NKV + G + TP+  KG   S ++ LR++L+L+ANV    SLPGYKTR+++++L+ IRE TEGEYS LEH+                             +    K     ++NIM+  DGLFL+ C EVA+   +   +K +  +C M L
Sbjct:   52 TMLPGDGVGPELMHAVKEVFKAASVPVEFQEHHL-SEVQNMASEEKLEQVLSSMKENKVAIIGKIHTPMEYKGELASYDMRLRRKLDLFANVVHVKSLPGYKTRHNNLDLVIIREQTEGEYSSLEHESARGVIECLKIVTRTKSQRIAKFAFDYATKKGRGKVTAVHKANIMKLGDGLFLQCCEEVAELYPKIKFEKMIIDNCCMQL 257          
BLAST of EY659377 vs. ExPASy Swiss-Prot
Match: IDH3B_RAT (Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial OS=Rattus norvegicus GN=Idh3B PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.641e-27
Identity = 71/188 (37.77%), Postives = 109/188 (57.98%), Query Frame = 1
Query:  280 TLFPGDGIGPEIAESVKQVFRTAEVPVDWEEHYVGTEIDPRTQSFLTWESLESVRRNKVGLKGPMATPIG-KGH-RSLNLTLRKELNLYANVRPCYSLPGYKTRYDDVNLITIRENTEGEYSGLEHQXXXXXXXXXXXXXXXXXXXXXXNMXFTMRRPWEEKSILHTQSNIMQKTDGLFLKWCPEVAQ 837
            T+ PGDG+GPE+  +VK+VF+ A VPV+++EH++ +E+          + L S++ NKV + G + TP+  KG   S ++ LR++L+L+ANV    SLPGYKTR+++++L+ IRE TEGEYS LEH+                             +    K     ++NIM+  DGLFL+ C EVA+
Sbjct:   52 TMLPGDGVGPELMHAVKEVFKAAAVPVEFKEHHL-SEVQNMASEEKLEQVLSSMKENKVAIIGKIYTPMEYKGELASYDMQLRRKLDLFANVVHVKSLPGYKTRHNNLDLVIIREQTEGEYSSLEHESARGVIECLKIVTRTKSQRIAKFAFDYATKKGRSKVTAVHKANIMKLGDGLFLQCCEEVAE 238          
The following BLAST results are available for this feature:
BLAST of EY659377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
IDHB_DICDI1.704e-2938.38Isocitrate dehydrogenase [NAD] regulatory subunit ... [more]
IDH3G_RAT1.884e-2840.21Isocitrate dehydrogenase [NAD] subunit gamma, mito... [more]
IDH3G_MOUSE2.461e-2840.21Isocitrate dehydrogenase [NAD] subunit gamma, mito... [more]
IDH3G_MACFA2.461e-2840.21Isocitrate dehydrogenase [NAD] subunit gamma, mito... [more]
IDH3G_HUMAN2.461e-2840.21Isocitrate dehydrogenase [NAD] subunit gamma, mito... [more]
IDH2_ARATH2.461e-2837.31Isocitrate dehydrogenase [NAD] regulatory subunit ... [more]
IDH1_KLULA3.214e-2838.54Isocitrate dehydrogenase [NAD] subunit 1, mitochon... [more]
IDH3G_BOVIN4.197e-2840.21Isocitrate dehydrogenase [NAD] subunit gamma, mito... [more]
IDH3B_BOVIN2.721e-2736.23Isocitrate dehydrogenase [NAD] subunit beta, mitoc... [more]
IDH3B_RAT4.641e-2737.77Isocitrate dehydrogenase [NAD] subunit beta, mitoc... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-E03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659377 ID=EY659377; Name=EY659377; organism=Citrus sinensis; type=EST; length=939bp
CCACGCGTCCGAAAAAAAAAAATAATAATAATAATAAAATTATATTCTCA
CCTTCAAAAGTTGCAATTTTTATTTTGCTTTTTTCTTTTTCTTTTTCATA
AAAATCACATCAAACGGAGAAGAAAAAAGAAGAAGAAGGATCAATCAATG
GCAACGCAGCTGCTGAGACGAGTCCTGGGAAGCCGATCGCGCCAGATCCT
CTCAACCACAAACCCCAACCCTAATTTAGCTTTGCCTATAGCCAGGGCCT
TCTCCTCCGATATTACTCCGATCACCGCCACTCTCTTTCCCGGCGACGGA
ATCGGCCCCGAGATCGCCGAGTCCGTTAAACAGGTATTTAGGACAGCTGA
AGTGCCAGTTGATTGGGAGGAGCATTATGTTGGGACTGAAATAGATCCTA
GAACACAAAGTTTTCTGACATGGGAAAGTTTAGAATCTGTGAGAAGGAAC
AAGGTGGGCTTGAAAGGGCCTATGGCAACACCAATTGGAAAGGGTCATCG
TTCATTGAATCTTACTTTGAGGAAAGAACTTAATTTGTATGCCAATGTTA
GGCCTTGCTACAGCCTCCCTGGGTATAAAACTCGCTATGATGATGTGAAT
CTTATCACTATCCGTGAGAACACAGAAGGAGAGTACAGTGGACTTGAACA
TCAAGTGGNTGAGAAGGTGTGGTTGAAAGTCTCAAAATCATTACTCGTCA
GGCTAGTTTGAGAAGTGCTGAATATGCNGTTCACTATGCGAAGACCATGG
GAAGAGAAGAGTATCTTGCATACACAAAGCAATATTATGCAGAAAACTGA
TGGGCTTTTTTTGAAGTGGTGTCCTGAAGTTGCCCAGAATACCCTGAGAT
AACATATGAAGAAAGTGTATCAACATTGCTGGATGATGCTTGGGAGAATC
CAACGGCTTCGATGGGTGGAATGGCTAACTCCATGGGAA
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