EY659372

Overview
NameEY659372
Unique NameEY659372
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length557
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4784 contig Csv1_Contig4784:330..886. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659372 vs. ExPASy Swiss-Prot
Match: UBC2_TRIHA (Ubiquitin-conjugating enzyme E2 2 OS=Trichoderma harzianum GN=UBC2 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 5.698e-21
Identity = 48/107 (44.86%), Postives = 66/107 (61.68%), Query Frame = 1
Query:    1 PRVRPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSW 306
            P   PF  G F + + F   YP KPP+V F +++FHPN+ +NG +CLDIL+ +WSP   ++ VL SI SLL DPN   P   E +++YK +R +Y     ET  RSW
Sbjct:   43 PADTPFEDGTFRLVMQFEEQYPNKPPQVKFISQMFHPNVYANGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTGSPANVEASNLYKDNRREYIKRVRETVERSW 149          
BLAST of EY659372 vs. ExPASy Swiss-Prot
Match: UBC2_DEBHA (Ubiquitin-conjugating enzyme E2 2 OS=Debaryomyces hansenii GN=UBC2 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.269e-20
Identity = 47/109 (43.12%), Postives = 65/109 (59.63%), Query Frame = 1
Query:    1 PRVRPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSWTQ 312
            P   PF  G F + + F   YP KPP V F +++FHPN+ ++G +CLDIL+ +WSP   +S +L SI SLL DPN   P   E A++YK  R++Y     ET   SW +
Sbjct:   43 PADTPFEDGTFRLILQFDEQYPNKPPSVKFISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSIQSLLNDPNISSPANVEAANLYKDHRSQYIKRVRETVENSWNE 151          
BLAST of EY659372 vs. ExPASy Swiss-Prot
Match: UBC2_CANGA (Ubiquitin-conjugating enzyme E2 2 OS=Candida glabrata GN=UBC2 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.165e-20
Identity = 45/107 (42.06%), Postives = 65/107 (60.75%), Query Frame = 1
Query:    1 PRVRPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSW 306
            P   P+  G F + + F  DYP KPP V F +++FHPN+ +NG ICLDIL+ +W+P   ++ +L SI SL  DPNP  P   E A ++K  +++Y     ET  +SW
Sbjct:   43 PADTPYEDGTFRLLLEFDEDYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYIKRVKETVEKSW 149          
BLAST of EY659372 vs. ExPASy Swiss-Prot
Match: UBC2_ASPFU (Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus fumigatus GN=ubc2 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.165e-20
Identity = 46/107 (42.99%), Postives = 64/107 (59.81%), Query Frame = 1
Query:    1 PRVRPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSW 306
            P   PF  G F + +HF   YP KPP V F +++FHPN+   G +CLDIL+ +WSP   ++ +L SI SLL DPN   P   E +++YK +R +Y     ET  +SW
Sbjct:   43 PADTPFEDGTFRLVMHFEEQYPNKPPGVKFISQMFHPNVYGTGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNTSSPANVEASNLYKDNRKEYIKRVRETVEKSW 149          
BLAST of EY659372 vs. ExPASy Swiss-Prot
Match: UBC2_EMENI (Ubiquitin-conjugating enzyme E2 2 OS=Emericella nidulans GN=uvsJ PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.693e-20
Identity = 45/109 (41.28%), Postives = 65/109 (59.63%), Query Frame = 1
Query:    1 PRVRPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSWTQ 312
            P   PF  G F + +HF   YP KPP V F +++FHPN+   G +CLDIL+ +WSP   ++ +L SI SLL DPN   P   E +++Y+ +R +Y     ET  +SW +
Sbjct:   43 PADTPFEDGTFRLVMHFEEQYPNKPPGVKFISQMFHPNVYGTGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNTSSPANVEASNLYRDNRKEYIKRVRETVEKSWEE 151          
BLAST of EY659372 vs. ExPASy Swiss-Prot
Match: UBC2_YEAST (Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces cerevisiae GN=RAD6 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.300e-20
Identity = 44/107 (41.12%), Postives = 65/107 (60.75%), Query Frame = 1
Query:    1 PRVRPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSW 306
            P   P+  G F + + F  +YP KPP V F +++FHPN+ +NG ICLDIL+ +W+P   ++ +L SI SL  DPNP  P   E A ++K  +++Y     ET  +SW
Sbjct:   43 PADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSW 149          
BLAST of EY659372 vs. ExPASy Swiss-Prot
Match: UBC2_YARLI (Ubiquitin-conjugating enzyme E2 2 OS=Yarrowia lipolytica GN=UBC2 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.300e-20
Identity = 46/108 (42.59%), Postives = 63/108 (58.33%), Query Frame = 1
Query:    1 PRVRPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE-----TTARSWT 309
            P   PF  G F + + F   YP KPP V F +++FHPN+ S+G +CLDIL+ +WSP   ++ +L S+ SLL DPN   P   E + +YK  R +YE     T   SWT
Sbjct:   43 PAETPFEDGTFRMVLQFDEQYPNKPPAVKFVSQMFHPNVYSSGELCLDILQNRWSPTYDVAAILTSVQSLLNDPNTSSPANVEASMLYKDHRQQYEKRVRDTVEASWT 150          
BLAST of EY659372 vs. ExPASy Swiss-Prot
Match: UBC2_NECHA (Ubiquitin-conjugating enzyme E2 2 OS=Nectria haematococca GN=UBC2 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.300e-20
Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 1
Query:    1 PRVRPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSW 306
            P   PF  G F + + F   YP KPP+V F +++FHPN+ + G +CLDIL+ +WSP   ++ VL SI SLL DPN   P   E +++YK +R +Y     ET  +SW
Sbjct:   43 PADTPFEDGTFRLVMQFEEQYPNKPPQVKFISEMFHPNVYATGELCLDILQNRWSPTYDVAAVLTSIQSLLNDPNTGSPANVEASNLYKDNRKEYTKRVRETVEKSW 149          
BLAST of EY659372 vs. ExPASy Swiss-Prot
Match: UBC2_CANAL (Ubiquitin-conjugating enzyme E2 2 OS=Candida albicans GN=UBC2 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.300e-20
Identity = 46/107 (42.99%), Postives = 64/107 (59.81%), Query Frame = 1
Query:    1 PRVRPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSW 306
            P   PF  G F + + F   YP KPP+V F +++FHPN+ ++G +CLDIL+ +WSP   +S +L S+ SLL DPN   P   E A++YK  R+ Y     ET   SW
Sbjct:   43 PSDTPFEDGTFRLLLSFDEQYPNKPPQVKFISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSVQSLLNDPNISSPANVEAANLYKDHRSLYVKRVRETVENSW 149          
BLAST of EY659372 vs. ExPASy Swiss-Prot
Match: UBC2_ASHGO (Ubiquitin-conjugating enzyme E2 2 OS=Ashbya gossypii GN=UBC2 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.300e-20
Identity = 44/107 (41.12%), Postives = 65/107 (60.75%), Query Frame = 1
Query:    1 PRVRPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSW 306
            P   P+  G F + + F  +YP KPP V F +++FHPN+ +NG ICLDIL+ +W+P   ++ +L SI SL  DPNP  P   E A ++K  +++Y     ET  +SW
Sbjct:   43 PADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSW 149          
The following BLAST results are available for this feature:
BLAST of EY659372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 241
Match NameE-valueIdentityDescription
UBC2_TRIHA5.698e-2144.86Ubiquitin-conjugating enzyme E2 2 OS=Trichoderma h... [more]
UBC2_DEBHA1.269e-2043.12Ubiquitin-conjugating enzyme E2 2 OS=Debaryomyces ... [more]
UBC2_CANGA2.165e-2042.06Ubiquitin-conjugating enzyme E2 2 OS=Candida glabr... [more]
UBC2_ASPFU2.165e-2042.99Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus f... [more]
UBC2_EMENI3.693e-2041.28Ubiquitin-conjugating enzyme E2 2 OS=Emericella ni... [more]
UBC2_YEAST6.300e-2041.12Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces... [more]
UBC2_YARLI6.300e-2042.59Ubiquitin-conjugating enzyme E2 2 OS=Yarrowia lipo... [more]
UBC2_NECHA6.300e-2042.99Ubiquitin-conjugating enzyme E2 2 OS=Nectria haema... [more]
UBC2_CANAL6.300e-2042.99Ubiquitin-conjugating enzyme E2 2 OS=Candida albic... [more]
UBC2_ASHGO6.300e-2041.12Ubiquitin-conjugating enzyme E2 2 OS=Ashbya gossyp... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-D10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659372 ID=EY659372; Name=EY659372; organism=Citrus sinensis; type=EST; length=557bp
CCACGCGTCCGCCCATTTGCTGGCGGTGTATTTCTTGTATCCATTCATTT
CCCACCTGATTATCCATTCAAGCCACCGAAGGTGGCCTTCCGTACTAAGG
TTTTCCACCCTAACATCAACAGCAATGGTAGCATCTGTCTTGACATTCTC
AAGGAGCAGTGGAGCCCTGCTTTGACAATATCCAAGGTACTTCTGTCAAT
TTGCTCACTACTTACTGATCCGAACCCAGATGACCCACTTGTGCCTGAGA
TTGCTCACATGTACAAGACTGACAGAGCCAAATATGAGACTACTGCTCGA
TCCTGGACTCAGAAGTATGCCATGGGTTAAGAGGGGCTAGGCTGTATGCC
CCTGAGAACATTAATGGCTTGTGGTCCTATTAGTAAATAATAGAAATAAG
TTTGTTTCAGATATTAAAAGACGATATTTGGTTTTGTTTACTAAGTTGTT
AAAAGGTTTTATGTGGGGTTACTTTCAAATTTAGCATTGTTCTTCAATAC
TTAAATTATAATTTACTGCAGAATTGAGCTGCCTTTGCCTTTAAAAAAAA
AAAAAAA
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