EY659369

Overview
NameEY659369
Unique NameEY659369
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length787
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8668 contig Csv1_Contig8668:17..803. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659369 vs. ExPASy Swiss-Prot
Match: GLRX5_DICDI (Monothiol glutaredoxin-5 OS=Dictyostelium discoideum GN=grx5 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.428e-20
Identity = 43/92 (46.74%), Postives = 66/92 (71.74%), Query Frame = 1
Query:  304 VTGNKVVLFMKGTKDFPQCGFSHTVVQILKSLNAPFETVNILENEMLRQGLKEYSSWPTFPQLYIEGEFFGGCDITVEAYKNGELQELLEKA 579
            V  +  +L+MKG  + P+CGFS+T V+IL++  A F + N+L+N  +R+ +KE+  WPT PQLY++G+F GG DI +  YK+GEL +LL +A
Sbjct:   45 VAESPCILYMKGIPERPECGFSNTAVRILQAEGAVFTSYNVLKNNDMREAVKEFGDWPTIPQLYVKGQFIGGADILMGLYKSGELSKLLNEA 136          
BLAST of EY659369 vs. ExPASy Swiss-Prot
Match: GLRX4_PASMU (Glutaredoxin-4 OS=Pasteurella multocida GN=grxD PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.182e-20
Identity = 45/97 (46.39%), Postives = 66/97 (68.04%), Query Frame = 1
Query:  289 TLDKV---VTGNKVVLFMKGTKDFPQCGFSHTVVQILKSLNAPFETVNILENEMLRQGLKEYSSWPTFPQLYIEGEFFGGCDITVEAYKNGELQELL 570
            TLDK+   ++ N ++++MKG+  FP CGFS   V+ L     PF  V+IL++  +R  L  Y++WPTFPQL+++GE  GGCDI +E ++ GELQ LL
Sbjct:    3 TLDKIKKQISENPILIYMKGSPKFPSCGFSARAVEALMHCKVPFGYVDILQHPDIRAELPAYANWPTFPQLWVDGELVGGCDIILEMFQQGELQTLL 99          
BLAST of EY659369 vs. ExPASy Swiss-Prot
Match: GLRX4_HAEDU (Glutaredoxin-4 OS=Haemophilus ducreyi GN=grxD PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.428e-20
Identity = 44/99 (44.44%), Postives = 66/99 (66.67%), Query Frame = 1
Query:  289 TLDKV---VTGNKVVLFMKGTKDFPQCGFSHTVVQILKSLNAPFETVNILENEMLRQGLKEYSSWPTFPQLYIEGEFFGGCDITVEAYKNGELQELLEK 576
            T+DK+   +  N ++L+MKG+  FP CGFS   V+ +     PF  V+IL N  +R  L ++++WPTFPQL++EGE  GGCDI +E ++ GEL  LL++
Sbjct:    3 TIDKIKQQINENPILLYMKGSPKFPSCGFSARAVEAIIQCQVPFGYVDILTNPDIRSELPKFANWPTFPQLWVEGELIGGCDIILEMFQKGELHTLLKE 101          
BLAST of EY659369 vs. ExPASy Swiss-Prot
Match: GLRX4_BUCAI (Glutaredoxin-4 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=grxD PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.428e-20
Identity = 45/95 (47.37%), Postives = 63/95 (66.32%), Query Frame = 1
Query:  292 LDKVVTGNKVVLFMKGTKDFPQCGFSHTVVQILKSLNAPFETVNILENEMLRQGLKEYSSWPTFPQLYIEGEFFGGCDITVEAYKNGELQELLEK 576
            + K +  N ++++MKGT + P CGFS   VQ L      F  VNILEN  +R  L +Y++WPTFPQL+I+GE  GGC I +E  +NGEL++L+ K
Sbjct:    7 IKKQIQDNIILIYMKGTPEAPSCGFSAQAVQALSFCGEKFAYVNILENPDIRSELPKYANWPTFPQLWIDGELIGGCSIILEMLENGELKKLILK 101          
BLAST of EY659369 vs. ExPASy Swiss-Prot
Match: GLRX3_DICDI (Glutaredoxin-3 homolog OS=Dictyostelium discoideum GN=glrx3 PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.089e-20
Identity = 47/96 (48.96%), Postives = 65/96 (67.71%), Query Frame = 1
Query:  280 LKSTLDKVVTGNKVVLFMKGTKDFPQCGFSHTVVQILKSLNAPFETVNILENEMLRQGLKEYSSWPTFPQLYIEGEFFGGCDITVEAYKNGELQEL 567
            L   L+K+V  + V+LFMKG  + PQCGFS+  V ILK     F + +IL+++ +R GLKEYS+WPT+PQLYI G+  GG DI  +  + GEL +L
Sbjct:  143 LNERLEKLVNQSPVMLFMKGNPEKPQCGFSNKTVTILKENGFEFGSFDILQDQAVRNGLKEYSNWPTYPQLYINGKLVGGYDIIKDLNEEGELIDL 238          
BLAST of EY659369 vs. ExPASy Swiss-Prot
Match: GLRX4_HAEI8 (Glutaredoxin-4 OS=Haemophilus influenzae (strain 86-028NP) GN=grxD PE=3 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.579e-19
Identity = 45/97 (46.39%), Postives = 64/97 (65.98%), Query Frame = 1
Query:  289 TLDKV---VTGNKVVLFMKGTKDFPQCGFSHTVVQILKSLNAPFETVNILENEMLRQGLKEYSSWPTFPQLYIEGEFFGGCDITVEAYKNGELQELL 570
            TLDK+   ++ N ++++MKG+   P CGFS    + L     PF  V+IL++  +R  L  Y++WPTFPQL++EGE  GGCDI +E Y+ GELQ LL
Sbjct:    3 TLDKIKKQISENPILIYMKGSPKLPSCGFSARASEALMHCKVPFGYVDILQHPDIRAELPTYANWPTFPQLWVEGELIGGCDIILEMYQAGELQTLL 99          
BLAST of EY659369 vs. ExPASy Swiss-Prot
Match: GLRX4_HAEIN (Glutaredoxin-4 OS=Haemophilus influenzae GN=grxD PE=3 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 6.001e-19
Identity = 44/97 (45.36%), Postives = 63/97 (64.95%), Query Frame = 1
Query:  289 TLDKV---VTGNKVVLFMKGTKDFPQCGFSHTVVQILKSLNAPFETVNILENEMLRQGLKEYSSWPTFPQLYIEGEFFGGCDITVEAYKNGELQELL 570
            TLDK+   ++ N ++++MKG+   P CGF     + L     PF  V+IL++  +R  L  Y++WPTFPQL++EGE  GGCDI +E Y+ GELQ LL
Sbjct:    3 TLDKIKKQISENPILIYMKGSPKLPSCGFPARASEALMHCKVPFGYVDILQHPDIRAELPTYANWPTFPQLWVEGELIGGCDIILEMYQAGELQTLL 99          
BLAST of EY659369 vs. ExPASy Swiss-Prot
Match: GLRX4_BUCAP (Glutaredoxin-4 OS=Buchnera aphidicola subsp. Schizaphis graminum GN=grxD PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.001e-19
Identity = 42/97 (43.30%), Postives = 64/97 (65.98%), Query Frame = 1
Query:  292 LDKVVTGNKVVLFMKGTKDFPQCGFSHTVVQILKSLNAPFETVNILENEMLRQGLKEYSSWPTFPQLYIEGEFFGGCDITVEAYKNGELQELLEKAL 582
            +++ +  N ++++MKGT   P CGFS   VQ L      F  V+ILEN  +R+ L  Y++WPTFPQL+I+GE  GGC I +E  +NGEL++++  A+
Sbjct:    7 IERQIKDNIILIYMKGTPQSPSCGFSAQAVQALSICGEKFAYVDILENLDIRKELPRYANWPTFPQLWIKGELIGGCSIILEMLENGELKKIISNAV 103          
BLAST of EY659369 vs. ExPASy Swiss-Prot
Match: GLRXA_LEGPH (Probable monothiol glutaredoxin grlA OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=grlA PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.746e-18
Identity = 42/87 (48.28%), Postives = 58/87 (66.67%), Query Frame = 1
Query:  322 VLFMKGTKDFPQCGFSHTVVQILKSLNAPFETVNILENEMLRQGLKEYSSWPTFPQLYIEGEFFGGCDITVEAYKNGELQELLEKAL 582
            +L+MKGT   PQCGFS   VQ +++    F  V+IL N  +RQ L ++S WPTFPQLY++GE  GG DI  E ++ GEL+ +L  A+
Sbjct:    1 MLYMKGTPKMPQCGFSARAVQCIEACGVDFAYVDILANPDIRQVLPQFSDWPTFPQLYVKGELIGGSDIIAEMFQQGELEPMLRDAV 87          
BLAST of EY659369 vs. ExPASy Swiss-Prot
Match: GLRX3_YEAST (Monothiol glutaredoxin-3 OS=Saccharomyces cerevisiae GN=GRX3 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.931e-17
Identity = 47/102 (46.08%), Postives = 65/102 (63.73%), Query Frame = 1
Query:  277 ELKSTLDKVVTGNKVVLFMKGTKDFPQCGFSHTVVQILKSLNAPFETVNILENEMLRQGLKEYSSWPTFPQLYIEGEFFGGCDITVEAYKNGELQELLEKAL 582
            ++ + L K+V    V+LFMKG+   P+CGFS  +V IL+     F   +IL +E +RQ LK++S WPTFPQLYI GEF GG DI  E+ +  E  + L+ AL
Sbjct:  184 QINARLTKLVNAAPVMLFMKGSPSEPKCGFSRQLVGILREHQVRFGFFDILRDESVRQNLKKFSEWPTFPQLYINGEFQGGLDIIKESLE--EDPDFLQHAL 283          
The following BLAST results are available for this feature:
BLAST of EY659369 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
GLRX5_DICDI1.428e-2046.74Monothiol glutaredoxin-5 OS=Dictyostelium discoide... [more]
GLRX4_PASMU3.182e-2046.39Glutaredoxin-4 OS=Pasteurella multocida GN=grxD PE... [more]
GLRX4_HAEDU5.428e-2044.44Glutaredoxin-4 OS=Haemophilus ducreyi GN=grxD PE=3... [more]
GLRX4_BUCAI5.428e-2047.37Glutaredoxin-4 OS=Buchnera aphidicola subsp. Acyrt... [more]
GLRX3_DICDI7.089e-2048.96Glutaredoxin-3 homolog OS=Dictyostelium discoideum... [more]
GLRX4_HAEI81.579e-1946.39Glutaredoxin-4 OS=Haemophilus influenzae (strain 8... [more]
GLRX4_HAEIN6.001e-1945.36Glutaredoxin-4 OS=Haemophilus influenzae GN=grxD P... [more]
GLRX4_BUCAP6.001e-1943.30Glutaredoxin-4 OS=Buchnera aphidicola subsp. Schiz... [more]
GLRXA_LEGPH1.746e-1848.28Probable monothiol glutaredoxin grlA OS=Legionella... [more]
GLRX3_YEAST1.931e-1746.08Monothiol glutaredoxin-3 OS=Saccharomyces cerevisi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-D07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659369 ID=EY659369; Name=EY659369; organism=Citrus sinensis; type=EST; length=787bp
CCACGCGTCCGAAAGAAGGAAAATTAGGAGCTGCTCGTAGTTGGGGCTGT
TATGGCTCTTCTTCATTCGTCGATGACTGCAACGCCACGCGCCTTCACCT
GTAAATCAGTATCGGTGGGCAAAGTTGCATCCTTTCCACCTCCGCTTGTG
AATTTCGCATCTCCGTCATCTTACTCTCCGCGCTCCTTGACCGGCGTCAC
AAATAATCTCCGCCTGTTGGGGGTTAAGTCTAACAAAGCCACGACCTTTC
GCTGCTTGGCTTCTGCTTTGACACCTGAGCTCAAGTCAACATTGGATAAA
GTTGTTACAGGAAACAAAGTGGTTCTGTTTATGAAGGGCACGAAGGATTT
CCCACAATGCGGATTCTCACACACTGTGGTGCAGATATTGAAGTCCTTGA
ATGCACCATTTGAAACGGTAAACATTCTAGAAAATGAAATGTTACGACAA
GGGTTGAAGGAGTATTCTAGTTGGCCAACCTTTCCTCAACTTTACATTGA
AGGAGAGTTTTTTGGTGGCTGTGACATCACAGTTGAGGCCTATAAGAATG
GGGAATTGCAAGAACTATTGGAGAAGGCACTGTGCACCTGAGACTCTTTT
AGTTGGAAGAGGGCTATTATACTTGTGTACTTGCTTAGTGGTGATTAGAA
AAAATCAACTGTTGTTTCTTGCTTGGTTCTGATTAAAAAAAAAAAATGTA
TAAATGACACAAACCCAGTTATTATTACCTATAGCAGCTACGATATTGAT
TATTGATGAAAATCATTTGTCAAGTGCTTTTNNNNNN
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