EY659358

Overview
NameEY659358
Unique NameEY659358
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3251 contig Csv1_Contig3251:298..1144. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY659358 vs. ExPASy Swiss-Prot
Match: PCCB_SACEN (Propionyl-CoA carboxylase beta chain OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=pccB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.211e-13
Identity = 41/131 (31.30%), Postives = 69/131 (52.67%), Query Frame = 3 
Query:   48 LVTGFAKIFGQPVGIIGNN-----GILFHESALKGAHFIELCTQRKIPLVFLQNITGFMVGSRSEANGIAKAGAKMVMAVSCAKVPKVTIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMGGAQVAS 425
            ++ GF +I G  VG++ N      G L  +++ K A F+  C    IP++ L ++ GF+ G+  + N I + GAK++ A + A VP VT+I   ++G     M  +    +    WP A+I+VMG    A+
Sbjct:  335 MLCGFGRIEGASVGVVANQPMQLAGTLDIDASEKAARFVRFCDAFNIPVLTLVDVPGFLPGTGQDWNAIIRRGAKLLYAYAEATVPLVTVITRKAYGGAYDVMGSKHLGADINLAWPTAQIAVMGAQGAAN 465
The following BLAST results are available for this feature:
BLAST of EY659358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
PCCB_SACEN4.211e-1331.30Propionyl-CoA carboxylase beta chain OS=Saccharopo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-C07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659358 ID=EY659358; Name=EY659358; organism=Citrus sinensis; type=EST; length=846bp
ATATCAATGAGTTTGTAACTCCATTTGGATTTGTATCTGTGCAGACACTT
GTGACTGGTTTTGCTAAAATCTTTGGTCAACCAGTGGGAATCATTGGAAA
CAATGGAATATTATTCCATGAATCTGCTCTAAAAGGGGCCCATTTCATTG
AACTTTGCACTCAACGGAAAATTCCATTGGTCTTTCTTCAGAATATTACT
GGATTCATGGTTGGCTCAAGATCTGAAGCAAATGGTATAGCAAAGGCTGG
AGCAAAAATGGTGATGGCAGTTTCTTGTGCAAAGGTACCAAAAGTTACAA
TAATTGTTGGAGGTAGTTTTGGTGCTGGAAATTATGCGATGTGTGGGCGT
GCGTATAGTCCCAATTTCATGTTTCTTTGGCCAAATGCCAGAATATCTGT
AATGGGTGGTGCTCAGGTAGCCTCTCCTATCAAAACTTTCTTGCACACAA
CTAATATGTCATCATGCATTTCCTTTGAAGTGAGGGGCATATAGATTTTA
TGATTCATGAATCTGAGTATTTCGATTAATACGTAGTGCTTCTTGCGAAC
AATCTACAATCCTAAGTCCTAACTACAGAAGGAAGATCACATATTGCTTT
CTCCTCTCAAATAAATATCCAATGATTGTTCTTTTTATTACTTCATGAAA
ATTTTGGTTAATTTCCCTGGTNCTTGGACTTCCTCTCTTTGCATTTTCAC
AATGTTTTCCCCATCCTTGAAACCTAATGAACCCGATCGTTACATAGCAA
TTACTTGACTCCTAATTTNATATTTGTTTAAGNATGAATGTTTACTTCCC
TGGCAAACGTAAGCTGCTGGATGCTGTCTCAGTAGAAAGGACAAAA
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