EY659357

Overview
NameEY659357
Unique NameEY659357
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6052 contig Csv1_Contig6052:357..1226. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659357 vs. ExPASy Swiss-Prot
Match: FLPA_PYRAE (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Pyrobaculum aerophilum GN=flpA PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.842e-35
Identity = 92/206 (44.66%), Postives = 123/206 (59.71%), Query Frame = 2
Query:  242 VVVEPH-RHEGVFIAKGKE--DALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDFGH--MAKKRTNVIPIIXDARHPAXYRMLVGMVDCIFSDVAPPDQARILPLMHHIFSKL-EVILLFLSRKLHRFTCSAGAVFQSEVKT 841
            V V+PH RH GV++ K ++  + + TKNL  G  VY E+ I    +     EYR WNP+RSKLAAA+L G+  + IK G  +LYLGAASGTT SH+SDIVG NG++Y+VEFS R  R+F    + + R NV+PI+ DAR P  Y   V  VD ++ DVA P QA+IL      F K    ++L +       T  A   F+ E+ T
Sbjct:    6 VEVKPHERHYGVYVVKFEDGTERIATKNLTPGRRVYGERLIKWGGD-----EYREWNPYRSKLAAAILNGLKLVPIKEGTHILYLGAASGTTPSHISDIVGENGLIYSVEFSPRVFREFMEKLVDQGRRNVVPILGDARFPYQYAHYVKGVDVVYIDVAQPAQAKILADNADYFLKPGGHVMLVIKAMSIDVTAPATETFKQEINT 206          
BLAST of EY659357 vs. ExPASy Swiss-Prot
Match: FLPA_PYRIL (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=flpA PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 4.537e-34
Identity = 93/216 (43.06%), Postives = 128/216 (59.26%), Query Frame = 2
Query:  245 VVEPHRHE---GVFIAKGKE--DALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDFGH--MAKKRTNVIPIIXDARHPAXYRMLVGMVDCIFSDVAPPDQARILPLMHHIFSKL-EVILLFLSRKLHRFTCSAGAVFQSEVKTC-NRSFQPL 865
            VV+  +HE   GV++ K ++  + L TKNL  G+ VY E+ I  ++E     EYR WNP+RSKLAAA++ G+  I I+ G  +LYLGAASGTT SH+SDIVG  G++Y+VEFS R  R+F    + + R NV+PI+ DAR P  Y   V  VD ++ DVA P QA+IL      F K    ++L +       T  A   F+ E+ T   R F+ L
Sbjct:    5 VVDVRKHEHHFGVYVVKFEDGTERLATKNLTPGKRVYGERLIKWRDE-----EYREWNPYRSKLAAAIVNGIKFIPIQEGTHMLYLGAASGTTPSHISDIVGERGLIYSVEFSPRVFREFIEKLVDQGRRNVVPILGDARFPYQYAHYVKGVDVVYIDVAQPAQAKILADNADYFLKPGGYVMLVIKAMSIDVTAPATETFKQEINTLKERGFEIL 215          
BLAST of EY659357 vs. ExPASy Swiss-Prot
Match: FLPA_PYRCJ (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=flpA PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.926e-34
Identity = 89/206 (43.20%), Postives = 121/206 (58.74%), Query Frame = 2
Query:  242 VVVEPHR-HEGVFIAKGKE--DALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDFGH--MAKKRTNVIPIIXDARHPAXYRMLVGMVDCIFSDVAPPDQARILPLMHHIFSKL-EVILLFLSRKLHRFTCSAGAVFQSEVKT 841
            V V PH  H GV++ + ++  + L T+NL  G  VY E+ I  +      VEYR WNP+RSKLAAA+L G+  + I+ G  +LYLGAASGTT SH+SDIVG  G++Y+VEFS R  R+F    + + R NVIPI+ DAR P  Y   +  VD ++ DVA P QA+IL      F K    ++L +       T  A   F+ E+ T
Sbjct:    6 VEVRPHELHYGVYVVRFEDGTERLATRNLTPGRRVYGERLIKWEG-----VEYREWNPYRSKLAAAILNGLKLVPIREGTHMLYLGAASGTTPSHISDIVGERGLIYSVEFSPRVFREFMEKLVDQGRRNVIPILGDARFPYQYAHYIKGVDVVYIDVAQPAQAKILADNADYFLKPGGYVMLVIKAMSIDVTAPATETFKQEINT 206          
BLAST of EY659357 vs. ExPASy Swiss-Prot
Match: FLPA_AERPE (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Aeropyrum pernix GN=flpA PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.740e-34
Identity = 85/202 (42.08%), Postives = 120/202 (59.41%), Query Frame = 2
Query:  245 VVEPHRHEGVFIAKGKEDAL--VTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDFGHMAKKRTNVIPIIXDARHPAXYRMLVGMVDCIFSDVAPPDQARILPLMHHIFSK-LEVILLFLSRKLHRFTCSAGAVFQSEVKT 841
            V E  R  GV++ + ++ +L   TKNLV G+ VY E+      E     EYR WN +RSKLAAA+L G+  + +K G R+LYLG ASGTT SH+SDI+GP G +Y VEF+ R  RD   + + R N+ PI+ DAR P  YR LV  VD +++DVA P+QA I+      F +    +L+ +  +    T     V++ E+KT
Sbjct:    7 VREHDRWRGVYVVELEDGSLRIATKNLVPGQRVYGERIFRYNGE-----EYREWNAYRSKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKT 203          
BLAST of EY659357 vs. ExPASy Swiss-Prot
Match: FLPA_NANEQ (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Nanoarchaeum equitans GN=flpA PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.320e-33
Identity = 79/175 (45.14%), Postives = 105/175 (60.00%), Query Frame = 2
Query:  242 VVVEPHRHEGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDFGHMAKKRTNVIPIIXDARHPAXYRMLVGMVDCIFSDVAPPDQARILPLMHHIFSKLEVI 766
            + V+PH+ EGV+I   K   L+TKNLV G+ VY E+    + E     EYR W PFRSKLA+A+  G+     K G  VLYLG ASGTT SH+SDI+G  G+++ VEF+ R  R+   +AKKR N++PI+ DA  P  Y+ +V   D I+ DVA P Q  I       F+K   I
Sbjct:    7 IKVKPHKLEGVYIGNNK--FLLTKNLVKGQKVYTERIFKSKGE-----EYREWIPFRSKLASAIKKGLKTWPFKKGTIVLYLGIASGTTASHISDIIGEEGIIFGVEFAPRVLRELMFVAKKRKNIVPILADANQPETYQHIVVQSDVIYQDVAQPHQVEIFLKNLRFFAKPNAI 174          
BLAST of EY659357 vs. ExPASy Swiss-Prot
Match: FLPA_PYRAR (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=flpA PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.724e-33
Identity = 87/206 (42.23%), Postives = 122/206 (59.22%), Query Frame = 2
Query:  242 VVVEPH-RHEGVFIAKGKE--DALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDFGH--MAKKRTNVIPIIXDARHPAXYRMLVGMVDCIFSDVAPPDQARILPLMHHIFSKL-EVILLFLSRKLHRFTCSAGAVFQSEVKT 841
            V V PH RH GV++ + ++  + + TKNL  G+ VY E+ I    +     EYR WNP+RSKLAAA++ G+  + I+ G  +LYLGAASGTT SH+SDIVG  G++Y+VEFS R  R+F    + + R NV+PI+ DAR P  Y   +  VD ++ DVA P QA+IL      F K    ++L +       T  A   F+ E+ T
Sbjct:    6 VDVRPHERHYGVYVVRFEDGTERIATKNLTPGKRVYGERLIKWGGD-----EYREWNPYRSKLAAAIVNGLKLVPIREGTHMLYLGAASGTTPSHISDIVGEKGLIYSVEFSPRVFREFMEKLVDQGRRNVVPILGDARFPYQYAHYIKGVDVVYIDVAQPAQAKILADNADYFLKPGGYVMLVIKAMSIDVTAPATETFKQEINT 206          
BLAST of EY659357 vs. ExPASy Swiss-Prot
Match: FLPA_METMA (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanosarcina mazei GN=flpA PE=3 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 2.941e-33
Identity = 92/200 (46.00%), Postives = 117/200 (58.50%), Query Frame = 2
Query:  266 EGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDFGHMAKKRTNVIPIIXDARHPAXYRMLVGMVDCIFSDVAPPDQARILPLMHHIFSKLE-VILLFLSRKLHRFTCSAGAVFQSEVKTCNRSFQP 862
            EG+F     +  L T NL  G+ VY EK ISV+ +     EYR W+P RSKL A VL   D I +K   +VLYLGAASGTTVSHVSDIV   G VY+VEF+ RS RDF  +A +R N+ PI+ DA  P  Y  +V  VD IF DVA P+QA I       F K +  +LL +  +      S   +F+ EVK   ++F+P
Sbjct:    9 EGIFEVTKDKKQLSTLNLDPGKVVYGEKLISVEGD-----EYRTWDPRRSKLGAMVLKKFD-IPLKRNSKVLYLGAASGTTVSHVSDIVS-EGAVYSVEFAPRSMRDFIGLASRRKNIFPILADAGKPDSYAHIVEPVDVIFQDVAQPNQAEIAARNAVRFLKKDGYLLLSIKARSIDTAASPKEIFKEEVKKLEQAFEP 201          
BLAST of EY659357 vs. ExPASy Swiss-Prot
Match: FLPA_METBF (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=flpA PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.118e-32
Identity = 93/200 (46.50%), Postives = 116/200 (58.00%), Query Frame = 2
Query:  266 EGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDFGHMAKKRTNVIPIIXDARHPAXYRMLVGMVDCIFSDVAPPDQARILPLMHHIFSKLE-VILLFLSRKLHRFTCSAGAVFQSEVKTCNRSFQP 862
            +G+F     +  L TKNL  G+ VY EK I+V+      VEYR W+P RSKL A VL    NI +    +VLYLGAASGTTVSHVSDIV   G VYAVEF+ RS RD   +A +R N+ PI+ DA  P  Y  LV  VD IF DVA P+QA I       F K E  +LL +  +          VF++EVK   ++F+P
Sbjct:    9 DGIFEVIKDKKQLATKNLDPGKTVYGEKLIAVEG-----VEYRTWDPRRSKLGAMVLKKF-NIPLTKNSKVLYLGAASGTTVSHVSDIVS-EGAVYAVEFAPRSMRDLIGLASRRKNIHPILADAGKPDSYSHLVEPVDLIFQDVAQPNQAEIAARNAVRFLKREGYLLLSIKARSIDTVAKPKEVFKAEVKKLEQAFEP 201          
BLAST of EY659357 vs. ExPASy Swiss-Prot
Match: FLPA_THENV (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=flpA PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.906e-32
Identity = 91/215 (42.33%), Postives = 122/215 (56.74%), Query Frame = 2
Query:  242 VVVEPH-RHEGVFIAKGKE--DALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDFGH--MAKKRTNVIPIIXDARHPAXYRMLVGMVDCIFSDVAPPDQARILPLMHHIFSKL-EVILLFLSRKLHRFTCSAGAVFQSEVKTC-NRSFQPL 865
            V V PH RH GV+  K ++  + L T+NL  G+ VY E+ +          EYR WNP+RSKLAAA+  G+  + I+ G  +LYLGAASGTT SH+SDIVG  G++Y+VEFS R  R+F    + + R NV+PI+ DAR P  Y   V  VD  + DVA P QA+IL      F K    ++L +       T  A   F+ E+ T   R F+ L
Sbjct:    6 VEVRPHERHFGVYALKFEDGSERLATRNLTPGKRVYGERLVKWGG-----AEYREWNPYRSKLAAAIANGIKFVPIQEGTHILYLGAASGTTPSHMSDIVGERGLIYSVEFSPRVFREFMEKLVDQGRRNVVPILGDARFPYQYAHYVKGVDVAYIDVAQPAQAKILADNADYFLKPGGYVMLVIKAMSIDVTAPATETFKQEINTLKERGFEIL 215          
BLAST of EY659357 vs. ExPASy Swiss-Prot
Match: FLPA_METAC (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanosarcina acetivorans GN=flpA PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.252e-32
Identity = 89/200 (44.50%), Postives = 113/200 (56.50%), Query Frame = 2
Query:  266 EGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDFGHMAKKRTNVIPIIXDARHPAXYRMLVGMVDCIFSDVAPPDQARILPL-MHHIFSKLEVILLFLSRKLHRFTCSAGAVFQSEVKTCNRSFQP 862
            EG+F     +  L T NL  G+ VY EK ISV+       EYR W+P RSKL A VL    NI +    +VLYLGAASGTTVSHVSDI    G VY+VEF+ RS RDF  +A +R N+ PI+ DA  P  Y  +V  VD IF DVA P+QA I         +K   +LL +  +      S   +F+ EVK   ++F+P
Sbjct:    9 EGIFEIMKDKRQLATLNLDPGKVVYGEKLISVEG-----AEYRTWDPRRSKLGAMVLKKF-NIPLSKDSKVLYLGAASGTTVSHVSDIAS-EGAVYSVEFASRSMRDFIRLASRRKNIFPILADAGKPDSYAHIVEPVDLIFQDVAQPNQAEIAARNAARFLNKNGYLLLSIKARSIDTAASPKEIFKEEVKKLEQAFEP 201          
The following BLAST results are available for this feature:
BLAST of EY659357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
FLPA_PYRAE1.842e-3544.66Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase ... [more]
FLPA_PYRIL4.537e-3443.06Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase ... [more]
FLPA_PYRCJ5.926e-3443.20Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase ... [more]
FLPA_AERPE7.740e-3442.08Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase ... [more]
FLPA_NANEQ1.320e-3345.14Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase ... [more]
FLPA_PYRAR1.724e-3342.23Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase ... [more]
FLPA_METMA2.941e-3346.00Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase ... [more]
FLPA_METBF1.118e-3246.50Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase ... [more]
FLPA_THENV1.906e-3242.33Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase ... [more]
FLPA_METAC3.252e-3244.50Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659357 ID=EY659357; Name=EY659357; organism=Citrus sinensis; type=EST; length=869bp
CCACGCGTCCGCTTTGTAGCCGGACAGAGCATCAAACATGAGACCTCCAA
GAGGACGCGGTGGTGGCGGTGGGTTCAGGGGAGGCAGAGGTGATGGAGGA
GGAAGAGGAAGAGGTGGCGGCCGAGGTGGTGGAGGTGGAAGAGGTGGTGG
TAGCGCTATGAGAGGCCGAGGTGGCGGTCGTGGCGGTGGCCGAGGTGGAG
GAAGAGGACGCGGTGGTGGAGGAATGAAGGGTGGAAGCAAGGTTGTAGTT
GAGCCTCATAGACACGAAGGAGTGTTCATTGCCAAGGGCAAAGAAGACGC
CCTTGTCACTAAGAATCTCGTCGCCGGTGAGGCTGTCTACAATGAGAAGA
GGATCTCCGTCCAGAATGAAGATGGAACCAAAGTTGAGTATAGAATTTGG
AATCCCTTCCGTTCCAAATTAGCTGCAGCTGTTCTTGGTGGTGTTGATAA
TATTTGGATTAAACCTGGTGTTAGGGTTCTATACCTTGGTGCTGCTTCCG
GCACAACTGTCTCACATGTTTCGGACATTGTTGGCCCTAATGGAGTAGTT
TATGCAGTGGAATTTTCTCATAGAAGTGGTAGAGACTTTGGTCATATGGC
AAAGAAGAGAACCAATGTTATACCCATAATTNGAGATGCTAGACATCCTG
CCNAGTACCGTATGTTGGTCGGTATGGTAGATTGTATATTTTCTGACGTT
GCCCCACCGGATCAGGCGAGGATTTTACCCCTGATGCATCATATTTTCTC
AAAGCTGGAGGTCATTTTGTTATTTCTATCAAGGAAACTGCATAGATTCA
CCTGTTCTGCTGGAGCAGTGTTCCAGAGTGAAGTTAAGACCTGCAACAGG
TCATTCCAACCCTTGAGCA
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