EY659357

Overview
NameEY659357
Unique NameEY659357
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length869
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6052 contig Csv1_Contig6052:357..1226. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659357 vs. ExPASy Swiss-Prot
Match: FLPA_SULSO (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Sulfolobus solfataricus GN=flpA PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.784e-30
Identity = 78/186 (41.94%), Postives = 111/186 (59.68%), Query Frame = 2
Query:  302 LVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDFGHMAKKRTNVIPIIXDARHPAXYRMLVGMVDCIFSDVAPPDQARILPLMHHIFSKL--EVILLFLSRKLHRFTCSAGAVFQSEVKTCNRS 853
            L T+NLV    VY E+ I  +      VEYR WN FRSKLA A+L G+    I+ G +VLYLGAASGTT+SHVSDI+  NG  Y VEFS R  R+   +A++R N+ P++ DAR P  Y+ +V  VD ++ D+A PDQ  I       F K+  +++L+  +R +   T     ++++EV+    S
Sbjct:   27 LCTRNLVPNFNVYGERLIKYEG-----VEYREWNAFRSKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYVDIAQPDQTDIAIYNAKFFLKVNGDMLLVIKARSID-VTKDPKEIYKTEVEKLENS 206          
BLAST of EY659357 vs. ExPASy Swiss-Prot
Match: FLPA_METM7 (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=flpA PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 3.642e-30
Identity = 68/142 (47.89%), Postives = 94/142 (66.20%), Query Frame = 2
Query:  302 LVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDFGHMAKKRTNVIPIIXDARHPAXYRMLVGMVDCIFSDVAPPDQARIL 727
            + TK+LV G+ VY EK +   +     +EYR+WNP +SKL AA++ G+  + IK G +VLYLGA++GTT SHV+DI   N +VYA+EF+ R  R+F     +R N+IP++ DA  P  Y  +V  VD IF DVA P+QA IL
Sbjct:   25 IATKSLVPGKRVYGEKLVYSDS-----IEYRVWNPNKSKLGAAIINGLKKMPIKKGTKVLYLGASAGTTPSHVADI-AENSLVYALEFAPRIMREFIDSCNERKNLIPVLGDANRPQDYSNIVEKVDVIFEDVAQPNQAEIL 160          

HSP 2 Score: 21.9422 bits (45), Expect = 3.642e-30
Identity = 10/22 (45.45%), Postives = 14/22 (63.64%), Query Frame = 1
Query:  718 EDFTPDASYFLKAGGHFVISIK 783
            E    +A +FLK  G+ +ISIK
Sbjct:  158 EILVKNARWFLKENGYAMISIK 179          
BLAST of EY659357 vs. ExPASy Swiss-Prot
Match: FLPA_META3 (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=flpA PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 3.642e-30
Identity = 70/142 (49.30%), Postives = 95/142 (66.90%), Query Frame = 2
Query:  302 LVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDFGHMAKKRTNVIPIIXDARHPAXYRMLVGMVDCIFSDVAPPDQARIL 727
            + TK+LV  + +Y EK I+ ++     +EYRIWNP RSKL AA++ G+  + IK G +VLYLG ++GTT SHV+DI   N  VY+VEF+ R  R+F  ++K R N+IPI+ DA +P  Y  +V  VD IF DVA P QA IL
Sbjct:   25 IATKSLVPSKRIYGEKLITGEDN----LEYRIWNPNRSKLGAAIVNGLKTMPIKKGSKVLYLGVSAGTTPSHVADIT-ENSPVYSVEFAPRIMREFLDVSKDRKNLIPILGDATNPVEYSNVVEEVDVIFEDVAQPKQAEIL 161          

HSP 2 Score: 23.8682 bits (50), Expect = 3.642e-30
Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 1
Query:  733 DASYFLKAGGHFVISIK 783
            +A +FLK GG+ +ISIK
Sbjct:  164 NAKWFLKEGGYGMISIK 180          
BLAST of EY659357 vs. ExPASy Swiss-Prot
Match: FLPA_METMP (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanococcus maripaludis GN=flpA PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 3.643e-30
Identity = 69/142 (48.59%), Postives = 94/142 (66.20%), Query Frame = 2
Query:  302 LVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDFGHMAKKRTNVIPIIXDARHPAXYRMLVGMVDCIFSDVAPPDQARIL 727
            + TK+LV G+ VY EK +   +     +EYRIWNP +SKL AA++ G+  + IK G +VLYLGA++GTT SHV+DI   N +VYA+EF+ R  R+F     +R N+IP++ DA  P  Y  +V  VD IF DVA P+QA IL
Sbjct:   25 IATKSLVPGKRVYGEKLVYSDS-----IEYRIWNPNKSKLGAAIINGLKKMPIKKGEKVLYLGASAGTTPSHVADI-AENSLVYALEFAPRIMREFIDSCNERKNLIPVLGDANRPQDYSNIVEKVDVIFEDVAQPNQAEIL 160          

HSP 2 Score: 22.3274 bits (46), Expect = 3.643e-30
Identity = 10/22 (45.45%), Postives = 14/22 (63.64%), Query Frame = 1
Query:  718 EDFTPDASYFLKAGGHFVISIK 783
            E    +A +FLK  G+ +ISIK
Sbjct:  158 EILVKNAKWFLKENGYAMISIK 179          
BLAST of EY659357 vs. ExPASy Swiss-Prot
Match: FLPA_METM6 (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=flpA PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 3.643e-30
Identity = 68/142 (47.89%), Postives = 93/142 (65.49%), Query Frame = 2
Query:  302 LVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDFGHMAKKRTNVIPIIXDARHPAXYRMLVGMVDCIFSDVAPPDQARIL 727
            + TK+LV G+ VY EK +   N     +EYR+WNP +SKL AA++ G+  + IK G +VLYLGA++GTT SHV+DI     +VYA+EF+ R  R+F     +R N+IP++ DA  P  Y  +V  VD IF DVA P+QA IL
Sbjct:   25 IATKSLVPGKRVYGEKLVYSDN-----IEYRVWNPNKSKLGAAIINGLKKMPIKKGTKVLYLGASAGTTPSHVADI-AETSLVYALEFAPRIMREFIDSCNERKNLIPVLGDANRPQDYSNIVEKVDVIFEDVAQPNQAEIL 160          

HSP 2 Score: 22.3274 bits (46), Expect = 3.643e-30
Identity = 10/22 (45.45%), Postives = 14/22 (63.64%), Query Frame = 1
Query:  718 EDFTPDASYFLKAGGHFVISIK 783
            E    +A +FLK  G+ +ISIK
Sbjct:  158 EILVKNAKWFLKENGYAMISIK 179          
BLAST of EY659357 vs. ExPASy Swiss-Prot
Match: FLPA_METKA (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanopyrus kandleri GN=flpA PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 8.041e-30
Identity = 71/166 (42.77%), Postives = 101/166 (60.84%), Query Frame = 2
Query:  239 KVVVEPHRH-EGVF--IAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDFGHMAKKRTNVIPIIXDARHPAXYRMLVGMVDCIFSDVAPPDQARIL 727
            ++ +EPH   EGV+  I +       T+NLV G  VY E+ +    +     EYR+W P RSKLAA ++ G++    + G +VLYLGAA+GTT SHVSDI+  +GV Y VEF+ R  ++   + +KR N+IPI+ DA  P  Y  LV  VD I+ D+A P QA ++
Sbjct:    3 EIEIEPHEEFEGVYWAIFEDGRKKPATENLVPGHQVYGERLVEYDGK-----EYRVWEPRRSKLAAMIMNGMEYFPFEEGSKVLYLGAAAGTTPSHVSDIIKESGVEYCVEFASRMMQELIPVCEKRPNMIPILGDATKPHGYAPLVEQVDVIYQDIAQPKQAEVV 163          

HSP 2 Score: 21.1718 bits (43), Expect = 8.041e-30
Identity = 7/17 (41.18%), Postives = 13/17 (76.47%), Query Frame = 1
Query:  733 DASYFLKAGGHFVISIK 783
            +A  FL+ GG+ +++IK
Sbjct:  166 NAEAFLRPGGYVIVAIK 182          
BLAST of EY659357 vs. ExPASy Swiss-Prot
Match: FLPA_METVO (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanococcus voltae GN=flpA PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.776e-29
Identity = 68/140 (48.57%), Postives = 92/140 (65.71%), Query Frame = 2
Query:  308 TKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDFGHMAKKRTNVIPIIXDARHPAXYRMLVGMVDCIFSDVAPPDQARIL 727
            TK+LV  + VY EK ++V+N      EYR+WNP +SKL A+++ G+  + IK G +VLYLGA++GTT SHV+D V  +  VYAVEF+ R  R+F    + R N+ PI+ DA  P  Y  +V  VD IF DVA P+QA IL
Sbjct:   25 TKSLVPNKRVYGEKLVNVKN-----TEYRVWNPNKSKLGASIINGLKEMPIKKGSKVLYLGASAGTTPSHVAD-VAEDSPVYAVEFAPRIMREFIESCEGRKNLFPILGDANKPEEYANIVEKVDVIFEDVAQPNQAEIL 158          

HSP 2 Score: 23.8682 bits (50), Expect = 1.776e-29
Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 1
Query:  733 DASYFLKAGGHFVISIK 783
            +A +FLK GG+ +ISIK
Sbjct:  161 NAKWFLKKGGYGMISIK 177          
BLAST of EY659357 vs. ExPASy Swiss-Prot
Match: FLPA_METJA (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanocaldococcus jannaschii GN=flpA PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.103e-29
Identity = 67/142 (47.18%), Postives = 95/142 (66.90%), Query Frame = 2
Query:  302 LVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDFGHMAKKRTNVIPIIXDARHPAXYRMLVGMVDCIFSDVAPPDQARIL 727
            + TK++V G+ VY+EK I + +E     EYRIWNP +SKLAAA++ G+  + IK   ++LYLGA++GTT SHV+DI    G+VYA+E++ R  R+      +R N+IPI+ DA  P  Y  +V  VD I+ DVA P+QA IL
Sbjct:   25 IATKSIVKGKKVYDEKIIKIGDE-----EYRIWNPNKSKLAAAIIKGLKVMPIKRDSKILYLGASAGTTPSHVADI-ADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYEDVAQPNQAEIL 160          

HSP 2 Score: 22.7126 bits (47), Expect = 5.103e-29
Identity = 9/17 (52.94%), Postives = 14/17 (82.35%), Query Frame = 1
Query:  733 DASYFLKAGGHFVISIK 783
            +A +FLK GG+ +I+IK
Sbjct:  163 NAKWFLKKGGYGMIAIK 179          
BLAST of EY659357 vs. ExPASy Swiss-Prot
Match: FLPA_METWO (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Methanobacterium wolfei GN=flpA PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.346e-28
Identity = 71/150 (47.33%), Postives = 92/150 (61.33%), Query Frame = 2
Query:  266 EGVFIAKGKEDALVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDFGHMAKKRTNVIPIIXDARHPAXYRMLVGMVDCIFSDVAPPDQ 715
            +GVFI +   D+LVT NL  G  VY EK I          EYR+W+P RSK+AAAVL G+    + P  RVLYLGA++GTT SH+SDIV   G VY VEFS R  R+   + + R N++P++ DA  P  Y  +V   D ++ DVA PDQ
Sbjct:    9 DGVFIMR---DSLVTVNLTPGVRVYGEKLIEWGGS-----EYRVWDPRRSKMAAAVLNGLRGFQLNPESRVLYLGASAGTTASHISDIV-TMGRVYCVEFSPRMMRELIEVCRVRGNMVPLLEDASRPLDYMRMVENADLVYCDVAQPDQ 149          
BLAST of EY659357 vs. ExPASy Swiss-Prot
Match: FLPA_SULAC (Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase OS=Sulfolobus acidocaldarius GN=flpA PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.113e-27
Identity = 71/151 (47.02%), Postives = 90/151 (59.60%), Query Frame = 2
Query:  302 LVTKNLVAGEAVYNEKRISVQNEDGTKVEYRIWNPFRSKLAAAVLGGVDNIWIKPGVRVLYLGAASGTTVSHVSDIVGPNGVVYAVEFSHRSGRDFGHMAKKRTNVIPIIXDARHPAXYRMLVGMVDCIFSDVAPPDQARILPLMHHIFSK 754
            L TKNL  G  VY E+ I         VEYR WN FRSKLA A++ G+    I  G ++LYLGAASGTT SH+SDIV   G VY+VEFS R  R+   +A+ R N+ PI+ DAR P  Y+ LV  VD ++ D+A P++  I       F K
Sbjct:   27 LCTKNLSPGHNVYGERLIKYGG-----VEYREWNAFRSKLAGAIVKGLKYNPIVKGSKILYLGAASGTTPSHISDIVELQGKVYSVEFSPRVIRELLLVAQYRPNMFPILADARFPQYYKSLVENVDIVYVDIAQPNETEIAMYNARFFLK 172          
The following BLAST results are available for this feature:
BLAST of EY659357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
FLPA_SULSO1.784e-3041.94Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase ... [more]
FLPA_METM73.642e-3047.89Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase ... [more]
FLPA_META33.642e-3049.30Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase ... [more]
FLPA_METMP3.643e-3048.59Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase ... [more]
FLPA_METM63.643e-3047.89Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase ... [more]
FLPA_METKA8.041e-3042.77Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase ... [more]
FLPA_METVO1.776e-2948.57Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase ... [more]
FLPA_METJA5.103e-2947.18Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase ... [more]
FLPA_METWO6.346e-2847.33Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase ... [more]
FLPA_SULAC4.113e-2747.02Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659357 ID=EY659357; Name=EY659357; organism=Citrus sinensis; type=EST; length=869bp
CCACGCGTCCGCTTTGTAGCCGGACAGAGCATCAAACATGAGACCTCCAA
GAGGACGCGGTGGTGGCGGTGGGTTCAGGGGAGGCAGAGGTGATGGAGGA
GGAAGAGGAAGAGGTGGCGGCCGAGGTGGTGGAGGTGGAAGAGGTGGTGG
TAGCGCTATGAGAGGCCGAGGTGGCGGTCGTGGCGGTGGCCGAGGTGGAG
GAAGAGGACGCGGTGGTGGAGGAATGAAGGGTGGAAGCAAGGTTGTAGTT
GAGCCTCATAGACACGAAGGAGTGTTCATTGCCAAGGGCAAAGAAGACGC
CCTTGTCACTAAGAATCTCGTCGCCGGTGAGGCTGTCTACAATGAGAAGA
GGATCTCCGTCCAGAATGAAGATGGAACCAAAGTTGAGTATAGAATTTGG
AATCCCTTCCGTTCCAAATTAGCTGCAGCTGTTCTTGGTGGTGTTGATAA
TATTTGGATTAAACCTGGTGTTAGGGTTCTATACCTTGGTGCTGCTTCCG
GCACAACTGTCTCACATGTTTCGGACATTGTTGGCCCTAATGGAGTAGTT
TATGCAGTGGAATTTTCTCATAGAAGTGGTAGAGACTTTGGTCATATGGC
AAAGAAGAGAACCAATGTTATACCCATAATTNGAGATGCTAGACATCCTG
CCNAGTACCGTATGTTGGTCGGTATGGTAGATTGTATATTTTCTGACGTT
GCCCCACCGGATCAGGCGAGGATTTTACCCCTGATGCATCATATTTTCTC
AAAGCTGGAGGTCATTTTGTTATTTCTATCAAGGAAACTGCATAGATTCA
CCTGTTCTGCTGGAGCAGTGTTCCAGAGTGAAGTTAAGACCTGCAACAGG
TCATTCCAACCCTTGAGCA
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