EY659350
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_BURTA (Glycine dehydrogenase [decarboxylating] OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=gcvP PE=3 SV=1) HSP 1 Score: 311.227 bits (796), Expect = 4.726e-84 Identity = 146/255 (57.25%), Postives = 192/255 (75.29%), Query Frame = 2 Query: 5 FLLFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAXGRLTA 769 F AGG + A A+P+GL R S YLT VFN++H+E E+LRY+ L K+L+L SMIPLGSCTMKLNAT+EM+PVTWP F IHPFAPA+Q GY+EM + L + L TG+ + SLQPNAG+ GEYAGL++I AYH++RG+ HRNVC+IP SAHGTNPA+A M GMK+V V DA+GN++I++L+ AE + ++L+ +M+TYPSTHGV+E+ + EIC+I+H +GGQVY+DGANMNA LTA Sbjct: 454 FAQAAGGTAPDVDALDAGLADTAALPAGLQRTSAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEMLPVTWPEFGRIHPFAPAEQTVGYREMIDQLEQMLVAATGYAAVSLQPNAGSQGEYAGLLIIHAYHESRGESHRNVCLIPASAHGTNPASAHMAGMKVVVVACDAQGNVDIDDLKAKAEQHANDLAAIMITYPSTHGVFEQNVREICEIVHAHGGQVYVDGANMNAMVGLTA 708
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_STRMK (Glycine dehydrogenase [decarboxylating] OS=Stenotrophomonas maltophilia (strain K279a) GN=gcvP PE=3 SV=1) HSP 1 Score: 310.842 bits (795), Expect = 6.172e-84 Identity = 146/247 (59.11%), Postives = 188/247 (76.11%), Query Frame = 2 Query: 11 LFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751 +F V AS A+ A+P+GL R+S +LT PVFN +H+EHELLRY+ L K+L++ +MIPLGSCTMKLNAT EM+PVTWP F+ IHP PADQA GY+E+ + L L TG+D+ SLQPN+GA GEYAGL+ IRAYH++RG+ HR++C+IP SAHGTNPA+A MCGMK+V TDA GN+++E++R AE D L+ +M+TYPSTHGV+EE + EIC+IIH +GGQVY DGANMNA Sbjct: 439 VFGASLDVDALDASTAD----ALPAGLLRQSAFLTHPVFNTHHSEHELLRYLRSLADKDLAMDRTMIPLGSCTMKLNATAEMIPVTWPEFSQIHPLVPADQALGYKELIDTLEAMLVECTGYDAVSLQPNSGAQGEYAGLLAIRAYHRSRGEGHRDICLIPDSAHGTNPASAQMCGMKVVVTKTDANGNVDVEDIRLNAEKYSDRLAAIMMTYPSTHGVFEEEVVEICEIIHKHGGQVYTDGANMNA 681
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_BURXL (Glycine dehydrogenase [decarboxylating] OS=Burkholderia xenovorans (strain LB400) GN=gcvP PE=3 SV=1) HSP 1 Score: 310.457 bits (794), Expect = 8.061e-84 Identity = 148/258 (57.36%), Postives = 192/258 (74.42%), Query Frame = 2 Query: 5 FLLFAGGKSVPFTAA---SLAEEVETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAXGRLTA 769 F AG K VP A ++A ++P L R S YLT VFN++H+E E+LRY+ L K+L+L SMIPLGSCTMKLNAT+EM+PVTWP F IHPFAPA+Q GY+EM + L L TG+ + SLQPNAG+ GEYAGL++I AYH +RG+ HRNVC+IP SAHGTNPA+A M GM+++ V DA+GN++IE+L+K AE + D L+ +M+TYPSTHGV+E+ + EIC+I+H +GGQVY+DGANMNA LTA Sbjct: 454 FAQAAGAKIVPQVDALDSTIAASDTASVPPALERTSAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEMLPVTWPEFGQIHPFAPAEQTVGYREMIDQLEAMLVAATGYAAVSLQPNAGSQGEYAGLLIIHAYHASRGEAHRNVCLIPASAHGTNPASAHMAGMQVIVVACDAQGNVDIEDLKKKAEQHADKLAAIMITYPSTHGVFEQNVREICEIVHAHGGQVYVDGANMNAMVGLTA 711
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_SHEAM (Glycine dehydrogenase [decarboxylating] OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=gcvP PE=3 SV=1) HSP 1 Score: 309.686 bits (792), Expect = 1.375e-83 Identity = 144/255 (56.47%), Postives = 191/255 (74.90%), Query Frame = 2 Query: 8 LLFAG-GKSVPFTAASLAEEVETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAXGRLTA 769 +L AG G V A + + ++IP+ L RE +LT P FN YH+E E++RYI L++K+L+L HSMI LGSCTMKLNA EM+PV+WP FAN+HPF P++QAQGY ++ L +WL ITG+D+ +QPN+GA GEYAGL+ IR YH++RG+ HR+VC+IP SAHGTNPA+A + GMK+V D +GN+++++LR A +NLS +M+TYPSTHGVYEE + EIC IIH +GGQVY+DGANMNA LTA Sbjct: 440 ILGAGHGLDVAAIDADILAKGSSSIPAALVREEAFLTHPTFNSYHSETEMMRYIKRLENKDLALNHSMISLGSCTMKLNAAVEMIPVSWPEFANMHPFCPSEQAQGYTQLIGELSDWLVDITGYDAVCMQPNSGAQGEYAGLLAIRKYHESRGEGHRDVCLIPQSAHGTNPASAQLAGMKVVVTACDKQGNVDLDDLRAKAAEVAENLSCIMITYPSTHGVYEETVREICDIIHQHGGQVYLDGANMNAQVGLTA 694
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_BURPP (Glycine dehydrogenase [decarboxylating] OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=gcvP PE=3 SV=1) HSP 1 Score: 309.686 bits (792), Expect = 1.375e-83 Identity = 144/241 (59.75%), Postives = 186/241 (77.18%), Query Frame = 2 Query: 47 ASLAEEVETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAXGRLTA 769 A LA ++P+ L R S YLT VFN++H+E E+LRY+ L K+L+L SMIPLGSCTMKLNAT+EM+PVTWP F IHPFAPA+Q GY+EM + L E L TG+ + SLQPNAG+ GEYAGL++I AYH +RG+ HRNVC+IP SAHGTNPA+A M GM++V V DA+GN++IE+L+K A + D L+ +M+TYPSTHGV+E+ + EIC+I+H +GGQVY+DGANMNA LTA Sbjct: 471 AKLAASNTASVPAALERTSAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEMLPVTWPEFGQIHPFAPAEQTVGYREMIDQLEEMLVAATGYAAVSLQPNAGSQGEYAGLLIIHAYHASRGEAHRNVCLIPASAHGTNPASAQMAGMQVVVVACDAQGNVDIEDLKKKAGQHADKLAAIMITYPSTHGVFEQNVREICEIVHAHGGQVYVDGANMNAMVGLTA 711
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_SHELP (Glycine dehydrogenase [decarboxylating] OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=gcvP PE=3 SV=1) HSP 1 Score: 309.301 bits (791), Expect = 1.796e-83 Identity = 143/249 (57.43%), Postives = 184/249 (73.90%), Query Frame = 2 Query: 23 GKSVPFTAASLAEEVETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAXGRLTA 769 G V A + +IP+ L R+ L P FN+YH+E E++RYI L++K+L+L HSMI LGSCTMKLNA TEMMPV+WP F N+HPF P DQAQGY E+ L WL ITG+D+ +QPN+GA+GEYAGL+ I+ YH++RG+ HRNVC+IP SAHGTNPA+A + GMKIV D +GN+++E+L+ A +NLS +MVTYPSTHGVYEE I EIC++IH +GGQVY+DGANMNA LT+ Sbjct: 446 GLDVAAIDADIIANGSNSIPAELVRQDAILEHPTFNRYHSETEMMRYIKRLENKDLALNHSMISLGSCTMKLNAATEMMPVSWPEFGNMHPFCPQDQAQGYAELIEELSNWLVDITGYDAMCMQPNSGASGEYAGLLAIKKYHESRGEGHRNVCLIPQSAHGTNPASAQLAGMKIVVTACDKQGNVDMEDLKAKAAEVAENLSCIMVTYPSTHGVYEETISEICEVIHQHGGQVYLDGANMNAQVGLTS 694
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_ENTS8 (Glycine dehydrogenase [decarboxylating] OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=gcvP PE=3 SV=1) HSP 1 Score: 307.375 bits (786), Expect = 1.986e-83 Identity = 142/259 (54.83%), Postives = 190/259 (73.36%), Query Frame = 2 Query: 2 AFLLFAGGKSVPFTAASLAEEV---ETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAXGRLTA 769 A L G+ F +L +EV +IP+ + R+ LT PVFN+YH+E E++RY+H L+ K+L+L +MIPLGSCTMKLNA EM+P+TWP FA +HPF PADQA+GY +M + L +WL +TG+D+ +QPN+GA GEYAGL+ IR YH++R + HR++C+IP SAHGTNPA+A M GM++V V D +GNI++ +LR AE D LS +MVTYPSTHGVYEE I E+C I+H GGQVY+DGANMNA +T+ Sbjct: 435 ALLRVVTGEDATFDIDALDKEVAHDSRSIPAAMLRDDAILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFAELHPFCPADQAEGYLQMISQLSDWLVKLTGYDALCMQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLIPSSAHGTNPASAQMAGMQVVVVACDKQGNIDLADLRAKAETAGDKLSCIMVTYPSTHGVYEETIREVCDIVHQYGGQVYLDGANMNAQVGITS 693 HSP 2 Score: 24.2534 bits (51), Expect = 1.986e-83 Identity = 12/20 (60.00%), Postives = 13/20 (65.00%), Query Frame = 1 Query: 766 SPGYIGADVCISSPQHLHSH 825 SPGYIGADV HL+ H Sbjct: 693 SPGYIGADV-----SHLNLH 707
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_BURCH (Glycine dehydrogenase [decarboxylating] OS=Burkholderia cenocepacia (strain HI2424) GN=gcvP PE=3 SV=1) HSP 1 Score: 308.531 bits (789), Expect = 3.063e-83 Identity = 147/255 (57.65%), Postives = 189/255 (74.12%), Query Frame = 2 Query: 5 FLLFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAXGRLTA 769 F AGG + A A+P+GL R S YLT VFN++H+E E+LRY+ L K+L+L SMIPLGSCTMKLNAT+EM+PVTWP F IHPFAPA+Q GY+EM + L E L TG+ + SLQPNAG+ GEYAGL++I AYH +RG+ HR+VC+IP SAHGTNPA+A M GMK+V V DA+GN++I +L+ AE + NL+ +M+TYPSTHGV+E+ + EIC+I+H +GGQVY+DGANMNA LTA Sbjct: 454 FAQAAGGTAPAVDALDAGLAGVAALPAGLERTSAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEMLPVTWPEFGGIHPFAPAEQTVGYREMIDQLEEMLVAATGYAAVSLQPNAGSQGEYAGLLIIHAYHASRGEGHRDVCLIPASAHGTNPASAHMAGMKVVVVACDAQGNVDIADLKAKAEQHSANLAAIMITYPSTHGVFEQNVREICEIVHAHGGQVYVDGANMNAMVGLTA 708
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_BURCA (Glycine dehydrogenase [decarboxylating] OS=Burkholderia cenocepacia (strain AU 1054) GN=gcvP PE=3 SV=1) HSP 1 Score: 308.531 bits (789), Expect = 3.063e-83 Identity = 147/255 (57.65%), Postives = 189/255 (74.12%), Query Frame = 2 Query: 5 FLLFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAXGRLTA 769 F AGG + A A+P+GL R S YLT VFN++H+E E+LRY+ L K+L+L SMIPLGSCTMKLNAT+EM+PVTWP F IHPFAPA+Q GY+EM + L E L TG+ + SLQPNAG+ GEYAGL++I AYH +RG+ HR+VC+IP SAHGTNPA+A M GMK+V V DA+GN++I +L+ AE + NL+ +M+TYPSTHGV+E+ + EIC+I+H +GGQVY+DGANMNA LTA Sbjct: 454 FAQAAGGTAPAVDALDAGLAGVAALPAGLERTSAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEMLPVTWPEFGGIHPFAPAEQTVGYREMIDQLEEMLVAATGYAAVSLQPNAGSQGEYAGLLIIHAYHASRGEGHRDVCLIPASAHGTNPASAHMAGMKVVVVACDAQGNVDIADLKAKAEQHSANLAAIMITYPSTHGVFEQNVREICEIVHAHGGQVYVDGANMNAMVGLTA 708
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_SHEPA (Glycine dehydrogenase [decarboxylating] OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=gcvP PE=3 SV=1) HSP 1 Score: 308.145 bits (788), Expect = 3.380e-83 Identity = 144/249 (57.83%), Postives = 183/249 (73.49%), Query Frame = 2 Query: 23 GKSVPFTAASLAEEVETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAXGRLTA 769 G+ A++ ++IPS L R+ LT P FN+Y +E E++RYI L++K+L+L HSMI LGSCTMKLNA TEM P+TWP F N+HPF P DQAQGY ++ L WL ITG+D+ SLQPN+GA GEYAGL+ I+ YH++RGD HRN+C+IP SAHGTNPA+A + GMKIV D GNI++ +L+ A DNLS +MVTYPSTHGVYEE I EIC++IH +GGQVY+DGANMNA LT+ Sbjct: 446 GQDAAALDAAIIANGSSSIPSELVRKDAILTHPTFNRYQSETEMMRYIKRLENKDLALNHSMISLGSCTMKLNAATEMAPITWPEFGNMHPFCPQDQAQGYAQLLEELSTWLVDITGYDAVSLQPNSGAQGEYAGLLAIKQYHESRGDAHRNICLIPQSAHGTNPASAQLAGMKIVVTACDKAGNIDMADLKAKAAEVADNLSCIMVTYPSTHGVYEETIGEICEVIHQHGGQVYLDGANMNAQVGLTS 694 HSP 2 Score: 22.7126 bits (47), Expect = 3.380e-83 Identity = 11/20 (55.00%), Postives = 13/20 (65.00%), Query Frame = 1 Query: 766 SPGYIGADVCISSPQHLHSH 825 SPG+IGADV HL+ H Sbjct: 694 SPGFIGADV-----SHLNLH 708 The following BLAST results are available for this feature:
BLAST of EY659350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 368
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659350 ID=EY659350; Name=EY659350; organism=Citrus sinensis; type=EST; length=862bpback to top |