EY659350

Overview
NameEY659350
Unique NameEY659350
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_BRUO2 (Glycine dehydrogenase [decarboxylating] OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=gcvP PE=3 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.472e-77
Identity = 133/228 (58.33%), Postives = 173/228 (75.88%), Query Frame = 2 
Query:   68 ETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            +T +  G  R   +LT  VF+ + +E E++R++  L  K+L+L  +MIPLGSCTMKLNA  EMMPV+W + AN+HPFAPA+Q QGY +M ++L  WLC ITGF   SLQPNAG+ GEYAGLM IR YH+ARG  HRN+C+IP SAHGTNPA+A+M GM +V V     G+I+I++L+  AE +RDNL+  M+TYPST+GV+EEGI   C+I+HDNGGQVY DGAN+NA
Sbjct:  437 DTVLVPGKERGEGFLTQEVFHSHRSETEMMRFLRRLADKDLALDRAMIPLGSCTMKLNAAAEMMPVSWNTVANLHPFAPAEQVQGYAKMTSDLEAWLCEITGFAGVSLQPNAGSQGEYAGLMAIRHYHQARGQGHRNICLIPSSAHGTNPASASMAGMSVVVVNCRPDGDIDIDDLKAKAEKHRDNLAAFMITYPSTYGVFEEGIKAFCEIVHDNGGQVYFDGANLNA 664
[Close]
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_BRUME (Glycine dehydrogenase [decarboxylating] OS=Brucella melitensis GN=gcvP PE=3 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.472e-77
Identity = 133/228 (58.33%), Postives = 173/228 (75.88%), Query Frame = 2 
Query:   68 ETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            +T +  G  R   +LT  VF+ + +E E++R++  L  K+L+L  +MIPLGSCTMKLNA  EMMPV+W + AN+HPFAPA+Q QGY +M ++L  WLC ITGF   SLQPNAG+ GEYAGLM IR YH+ARG  HRN+C+IP SAHGTNPA+A+M GM +V V     G+I+I++L+  AE +RDNL+  M+TYPST+GV+EEGI   C+I+HDNGGQVY DGAN+NA
Sbjct:  437 DTVLVPGKERGEGFLTQEVFHSHRSETEMMRFLRRLADKDLALDRAMIPLGSCTMKLNAAAEMMPVSWNTVANLHPFAPAEQVQGYAKMTSDLEAWLCEITGFAGVSLQPNAGSQGEYAGLMAIRHYHQARGQGHRNICLIPSSAHGTNPASASMAGMSVVVVNCRPDGDIDIDDLKAKAEKHRDNLAAFMITYPSTYGVFEEGIKAFCEIVHDNGGQVYFDGANLNA 664
[Close]
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_BRUMB (Glycine dehydrogenase [decarboxylating] OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=gcvP PE=3 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.472e-77
Identity = 133/228 (58.33%), Postives = 173/228 (75.88%), Query Frame = 2 
Query:   68 ETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            +T +  G  R   +LT  VF+ + +E E++R++  L  K+L+L  +MIPLGSCTMKLNA  EMMPV+W + AN+HPFAPA+Q QGY +M ++L  WLC ITGF   SLQPNAG+ GEYAGLM IR YH+ARG  HRN+C+IP SAHGTNPA+A+M GM +V V     G+I+I++L+  AE +RDNL+  M+TYPST+GV+EEGI   C+I+HDNGGQVY DGAN+NA
Sbjct:  437 DTVLVPGKERGEGFLTQEVFHSHRSETEMMRFLRRLADKDLALDRAMIPLGSCTMKLNAAAEMMPVSWNTVANLHPFAPAEQVQGYAKMTSDLEAWLCEITGFAGVSLQPNAGSQGEYAGLMAIRHYHQARGQGHRNICLIPSSAHGTNPASASMAGMSVVVVNCRPDGDIDIDDLKAKAEKHRDNLAAFMITYPSTYGVFEEGIKAFCEIVHDNGGQVYFDGANLNA 664
[Close]
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_BRUAB (Glycine dehydrogenase [decarboxylating] OS=Brucella abortus GN=gcvP PE=3 SV=2)

HSP 1 Score: 289.656 bits (740), Expect = 1.472e-77
Identity = 133/228 (58.33%), Postives = 173/228 (75.88%), Query Frame = 2 
Query:   68 ETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            +T +  G  R   +LT  VF+ + +E E++R++  L  K+L+L  +MIPLGSCTMKLNA  EMMPV+W + AN+HPFAPA+Q QGY +M ++L  WLC ITGF   SLQPNAG+ GEYAGLM IR YH+ARG  HRN+C+IP SAHGTNPA+A+M GM +V V     G+I+I++L+  AE +RDNL+  M+TYPST+GV+EEGI   C+I+HDNGGQVY DGAN+NA
Sbjct:  437 DTVLVPGKERGEGFLTQEVFHSHRSETEMMRFLRRLADKDLALDRAMIPLGSCTMKLNAAAEMMPVSWNTVANLHPFAPAEQVQGYAKMTSDLEAWLCEITGFAGVSLQPNAGSQGEYAGLMAIRHYHQARGQGHRNICLIPSSAHGTNPASASMAGMSVVVVNCRPDGDIDIDDLKAKAEKHRDNLAAFMITYPSTYGVFEEGIKAFCEIVHDNGGQVYFDGANLNA 664
[Close]
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_BRUA2 (Glycine dehydrogenase [decarboxylating] OS=Brucella abortus (strain 2308) GN=gcvP PE=3 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.472e-77
Identity = 133/228 (58.33%), Postives = 173/228 (75.88%), Query Frame = 2 
Query:   68 ETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            +T +  G  R   +LT  VF+ + +E E++R++  L  K+L+L  +MIPLGSCTMKLNA  EMMPV+W + AN+HPFAPA+Q QGY +M ++L  WLC ITGF   SLQPNAG+ GEYAGLM IR YH+ARG  HRN+C+IP SAHGTNPA+A+M GM +V V     G+I+I++L+  AE +RDNL+  M+TYPST+GV+EEGI   C+I+HDNGGQVY DGAN+NA
Sbjct:  437 DTVLVPGKERGEGFLTQEVFHSHRSETEMMRFLRRLADKDLALDRAMIPLGSCTMKLNAAAEMMPVSWNTVANLHPFAPAEQVQGYAKMTSDLEAWLCEITGFAGVSLQPNAGSQGEYAGLMAIRHYHQARGQGHRNICLIPSSAHGTNPASASMAGMSVVVVNCRPDGDIDIDDLKAKAEKHRDNLAAFMITYPSTYGVFEEGIKAFCEIVHDNGGQVYFDGANLNA 664
[Close]
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_BRUA1 (Glycine dehydrogenase [decarboxylating] OS=Brucella abortus (strain S19) GN=gcvP PE=3 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.472e-77
Identity = 133/228 (58.33%), Postives = 173/228 (75.88%), Query Frame = 2 
Query:   68 ETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            +T +  G  R   +LT  VF+ + +E E++R++  L  K+L+L  +MIPLGSCTMKLNA  EMMPV+W + AN+HPFAPA+Q QGY +M ++L  WLC ITGF   SLQPNAG+ GEYAGLM IR YH+ARG  HRN+C+IP SAHGTNPA+A+M GM +V V     G+I+I++L+  AE +RDNL+  M+TYPST+GV+EEGI   C+I+HDNGGQVY DGAN+NA
Sbjct:  437 DTVLVPGKERGEGFLTQEVFHSHRSETEMMRFLRRLADKDLALDRAMIPLGSCTMKLNAAAEMMPVSWNTVANLHPFAPAEQVQGYAKMTSDLEAWLCEITGFAGVSLQPNAGSQGEYAGLMAIRHYHQARGQGHRNICLIPSSAHGTNPASASMAGMSVVVVNCRPDGDIDIDDLKAKAEKHRDNLAAFMITYPSTYGVFEEGIKAFCEIVHDNGGQVYFDGANLNA 664
[Close]
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_XANCP (Glycine dehydrogenase [decarboxylating] OS=Xanthomonas campestris pv. campestris GN=gcvP PE=3 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.923e-77
Identity = 130/226 (57.52%), Postives = 170/226 (75.22%), Query Frame = 2 
Query:   74 AIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            A+P G+ R S +L  PVFN +H+EHELLRY+  L  K+L++  +MIPLGSCTMKLNAT EM+PVTWP F  IHP AP +Q+ GY ++   L   L   TG+D+ SLQPN+GA GEYAGL+ IRAYH++R + HR++C+IP SAHGTNPA+A MCGM +V    DA GN++++++R  AE   D L+ LM+TYPSTHGV+EE +  IC+ +H +GGQVY DGANMNA
Sbjct:  456 ALPQGMRRTSAFLQHPVFNTHHSEHELLRYMRSLADKDLAMDRTMIPLGSCTMKLNATAEMIPVTWPEFGAIHPLAPPEQSAGYAQLIEELEAMLVECTGYDAVSLQPNSGAQGEYAGLLAIRAYHRSRNEAHRDICLIPESAHGTNPASAQMCGMTVVVTKCDANGNVDVDDIRAKAEKYSDRLAALMITYPSTHGVFEEDVVAICEAVHAHGGQVYTDGANMNA 681
[Close]
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_XANC8 (Glycine dehydrogenase [decarboxylating] OS=Xanthomonas campestris pv. campestris (strain 8004) GN=gcvP PE=3 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.923e-77
Identity = 130/226 (57.52%), Postives = 170/226 (75.22%), Query Frame = 2 
Query:   74 AIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            A+P G+ R S +L  PVFN +H+EHELLRY+  L  K+L++  +MIPLGSCTMKLNAT EM+PVTWP F  IHP AP +Q+ GY ++   L   L   TG+D+ SLQPN+GA GEYAGL+ IRAYH++R + HR++C+IP SAHGTNPA+A MCGM +V    DA GN++++++R  AE   D L+ LM+TYPSTHGV+EE +  IC+ +H +GGQVY DGANMNA
Sbjct:  456 ALPQGMRRTSAFLQHPVFNTHHSEHELLRYMRSLADKDLAMDRTMIPLGSCTMKLNATAEMIPVTWPEFGAIHPLAPPEQSAGYAQLIEELEAMLVECTGYDAVSLQPNSGAQGEYAGLLAIRAYHRSRNEAHRDICLIPESAHGTNPASAQMCGMTVVVTKCDANGNVDVDDIRAKAEKYSDRLAALMITYPSTHGVFEEDVVAICEAVHAHGGQVYTDGANMNA 681
[Close]
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_RHIME (Glycine dehydrogenase [decarboxylating] OS=Rhizobium meliloti GN=gcvP PE=3 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.923e-77
Identity = 131/230 (56.96%), Postives = 170/230 (73.91%), Query Frame = 2 
Query:   62 EVETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            E +  +P  L R S YLT P+F+    E E+ RY+  L  ++L+L  +MIPLGSCTMKLNAT EM+P+TWP F+ IHPF PADQA GYQ +  +L + LC ITG+D+ S+QPN+GA GEYAGL+ IRAYH A G+ HR+VC+IP SAHGTNPA+A M GMK+V V     G I++++ R  AE   D LS  M+TYPSTHGV+EE + E+C+++H +GGQVY+DGANMNA
Sbjct:  454 EPDYRLPQELLRTSAYLTHPIFHMNRAESEMTRYMRRLADRDLALDRAMIPLGSCTMKLNATAEMLPITWPEFSEIHPFVPADQALGYQHLIEDLSQKLCAITGYDAISMQPNSGAQGEYAGLLAIRAYHIANGNEHRDVCLIPTSAHGTNPASAQMAGMKVVVVKVSDAGEIDMDDFRAKAEQYADTLSCCMITYPSTHGVFEENVREVCEVVHKHGGQVYLDGANMNA 683
[Close]
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_BRUSI (Glycine dehydrogenase [decarboxylating] OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=gcvP PE=3 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.923e-77
Identity = 133/228 (58.33%), Postives = 173/228 (75.88%), Query Frame = 2 
Query:   68 ETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            +T +  G  R   +LT  VF+ + +E E++R++  L  K+L+L  +MIPLGSCTMKLNA  EMMPV+W + AN+HPFAPA+Q QGY +M ++L  WLC ITGF   SLQPNAG+ GEYAGLM IR YH+ARG  HRN+C+IP SAHGTNPA+A+M GM +V V     G+I+I++L+  AE +RDNL+  M+TYPST+GV+EEGI   C+I+HDNGGQVY DGAN+NA
Sbjct:  437 DTVLVPGKERGEGFLTQEVFHSHRSETEMMRFLRRLVDKDLALDRAMIPLGSCTMKLNAAAEMMPVSWNTVANLHPFAPAEQVQGYAKMTSDLEAWLCEITGFAGVSLQPNAGSQGEYAGLMAIRHYHQARGQGHRNICLIPSSAHGTNPASASMAGMSVVVVNCRPDGDIDIDDLKAKAEKHRDNLAAFMITYPSTYGVFEEGIKAFCEIVHDNGGQVYFDGANLNA 664
The following BLAST results are available for this feature:
BLAST of EY659350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 368
Match NameE-valueIdentityDescription
GCSP_BRUO21.472e-7758.33Glycine dehydrogenase [decarboxylating] OS=Brucell... [more]
GCSP_BRUME1.472e-7758.33Glycine dehydrogenase [decarboxylating] OS=Brucell... [more]
GCSP_BRUMB1.472e-7758.33Glycine dehydrogenase [decarboxylating] OS=Brucell... [more]
GCSP_BRUAB1.472e-7758.33Glycine dehydrogenase [decarboxylating] OS=Brucell... [more]
GCSP_BRUA21.472e-7758.33Glycine dehydrogenase [decarboxylating] OS=Brucell... [more]
GCSP_BRUA11.472e-7758.33Glycine dehydrogenase [decarboxylating] OS=Brucell... [more]
GCSP_XANCP1.923e-7757.52Glycine dehydrogenase [decarboxylating] OS=Xanthom... [more]
GCSP_XANC81.923e-7757.52Glycine dehydrogenase [decarboxylating] OS=Xanthom... [more]
GCSP_RHIME1.923e-7756.96Glycine dehydrogenase [decarboxylating] OS=Rhizobi... [more]
GCSP_BRUSI1.923e-7758.33Glycine dehydrogenase [decarboxylating] OS=Brucell... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-B11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659350 ID=EY659350; Name=EY659350; organism=Citrus sinensis; type=EST; length=862bp
AGCTTTTCTACTTTTCGCCGGGGGCAAATCAGTTCCATTCACTGCTGCAT
CTCTGGCTGAAGAGGTTGAGACTGCAATTCCGTCTGGATTAACAAGGGAG
AGTCCGTATCTGACAGATCCTGTTTTTAACAAATACCACACAGAGCATGA
ATTGCTTAGATACATTCATCTGTTACAATCAAAGGAGCTCTCACTATGCC
ATAGTATGATTCCATTGGGATCTTGTACAATGAAATTGAATGCAACAACT
GAAATGATGCCAGTGACATGGCCTAGCTTTGCTAACATACACCCTTTTGC
CCCTGCTGACCAGGCTCAGGGTTATCAGGAAATGTTTAACAATCTGGGTG
AGTGGCTGTGTACCATTACTGGCTTTGACTCTTTCTCTTTGCAACCAAAT
GCTGGTGCAGCTGGTGAGTATGCTGGGCTCATGGTTATCCGCGCTTATCA
TAAGGCAAGAGGAGACCATCACCGCAATGTGTGCATTATACCCGTGTCAG
CCCATGGGACAAATCCTGCTACTGCTGCCATGTGTGGAATGAAGATTGTT
TCTGTTGGAACTGATGCCAAGGGTAACATCAACATTGAAGAGTTAAGGAA
GGCCGCAGAAGCTAATAGGGACAACCTATCAACCCTTATGGTAACGTACC
CTTCAACTCATGGAGTTTATGAAGAAGGTATTGATGAGATATGCAAGATA
ATTCACGATAATGGAGGTCAAGTATATATGGACGGGGCTAACATGAATGC
TCANGGTCGTCTGACAGCCCTGGNTACATTGGAGCTGATGTTTGCATCTC
ATCTCCACAACATTTGCATTCGCATGGAGTGGNTGTCCCTGTATGGGCCT
ATTGTGTGAAGA
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