EY659350

Overview
NameEY659350
Unique NameEY659350
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_BRUC2 (Glycine dehydrogenase [decarboxylating] OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=gcvP PE=3 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 1.246e-76
Identity = 132/228 (57.89%), Postives = 172/228 (75.44%), Query Frame = 2
Query:   68 ETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            +T +  G  R   +LT  VF+ + +E E++R++  L  K+L+L  +MIPLGSCTMKLNA  EMMPV+W + AN+HPFAPA+Q QGY +M ++L  WLC ITGF   SLQPNAG+ GEYAGLM IR YH+A G  HRN+C+IP SAHGTNPA+A+M GM +V V     G+I+I++L+  AE +RDNL+  M+TYPST+GV+EEGI   C+I+HDNGGQVY DGAN+NA
Sbjct:  437 DTVLVPGKERGEGFLTQEVFHSHRSETEMMRFLRRLADKDLALDRAMIPLGSCTMKLNAAAEMMPVSWNTVANLHPFAPAEQVQGYAKMTSDLEAWLCEITGFAGVSLQPNAGSQGEYAGLMAIRHYHQAWGQGHRNICLIPSSAHGTNPASASMAGMSVVVVNCRPDGDIDIDDLKAKAEKHRDNLAAFMITYPSTYGVFEEGIKAFCEIVHDNGGQVYFDGANLNA 664          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_AGRRK (Glycine dehydrogenase [decarboxylating] OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=gcvP PE=3 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 1.246e-76
Identity = 130/225 (57.78%), Postives = 169/225 (75.11%), Query Frame = 2
Query:   77 IPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            +P  L R S YLT P+F+    E E+ RYI  L  ++L+L  SMIPLGSCTMKLNAT EM+P++WP F++IHPF P DQA GY+EM ++L E LC +TG+D+FS+QPN+GA GEYAGL+ IR YH A G+ HR++C+IP SAHGTNPA+A M GMK+V +     G+I++ + R  AE    NLS  M+TYPSTHGV+EE + EIC ++H +GGQVY+DGANMNA
Sbjct:  459 LPKTLLRTSEYLTHPIFHMNRAESEMTRYIRRLSDRDLALDRSMIPLGSCTMKLNATAEMLPISWPEFSDIHPFVPTDQALGYREMIDDLTEKLCAVTGYDAFSMQPNSGAQGEYAGLLTIRNYHIANGEGHRDICLIPTSAHGTNPASAQMAGMKVVVIKVSDDGDIDMADFRAKAEQYAANLSCCMITYPSTHGVFEETVKEICDLVHKHGGQVYLDGANMNA 683          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_RHOP5 (Glycine dehydrogenase [decarboxylating] OS=Rhodopseudomonas palustris (strain BisA53) GN=gcvP PE=3 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.628e-76
Identity = 131/235 (55.74%), Postives = 180/235 (76.60%), Query Frame = 2
Query:   47 ASLAEEVETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            A +   +  A+   L R SP++T  VF+ Y +E ELLRY+  L  ++L+L  +MIPLGSCTMKLNATTEMMP++ P FA++HPFAP +QA GY  +F+ L  WL  ITG+D+ SLQPN+GA GEYAGL+ IR Y+K+RG+ HR +C+IP SAHGTNPA+AAM GM++V V  + +G++++++LR  AE +  NL+ +M+TYPSTHGV+EE I +IC I+H +GGQVY+DGAN+NA
Sbjct:  447 AEIEPAMRDALHPTLKRTSPFMTQEVFHLYRSETELLRYMRKLSDRDLALDRAMIPLGSCTMKLNATTEMMPLSLPGFAHLHPFAPPEQALGYHALFDKLETWLAEITGYDAVSLQPNSGAQGEYAGLLAIRGYYKSRGEPHRKICLIPSSAHGTNPASAAMAGMEVVVVECNDRGDVDVDDLRARAELHSPNLAAVMITYPSTHGVFEEHIRDICDIVHAHGGQVYLDGANLNA 681          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_SINMW (Glycine dehydrogenase [decarboxylating] OS=Sinorhizobium medicae (strain WSM419) GN=gcvP PE=3 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 2.126e-76
Identity = 130/230 (56.52%), Postives = 168/230 (73.04%), Query Frame = 2
Query:   62 EVETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            E +  +P  L R S YLT P+F+    E E+ RY+  L  ++L+L  +MIPLGSCTMKLNAT EM+P+TWP F+ IHPF PADQA GY  +  +L + LC ITG+D+ S+QPN+GA GEYAGL+ IRAYH A G+ HR+VC+IP SAHGTNPA+A M GMK+V V     G I +++ R  AE   + LS  M+TYPSTHGV+EE + E+C+I+H +GGQVY+DGANMNA
Sbjct:  454 EPDYRLPKELLRTSDYLTHPIFHMNRAESEMTRYMRRLADRDLALDRAMIPLGSCTMKLNATAEMLPITWPEFSEIHPFVPADQAMGYHHLIEDLSQKLCAITGYDAISMQPNSGAQGEYAGLLAIRAYHIANGNEHRDVCLIPTSAHGTNPASAQMAGMKVVVVKVSDAGEIAMDDFRAKAEQYAETLSCCMITYPSTHGVFEENVREVCEIVHKHGGQVYLDGANMNA 683          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_RHOS1 (Glycine dehydrogenase [decarboxylating] OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=gcvP PE=3 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 2.126e-76
Identity = 130/230 (56.52%), Postives = 170/230 (73.91%), Query Frame = 2
Query:   62 EVETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            +V    P  L RE+ YL+ PVF     E E++RY+  L  ++L+L  +MIPLGSCTMKLNA  EMMP+TWP F  +HPFAPADQA GY E   +L + LC ITG+D+ S+QPN+GA GEYAGL+ I AYH+ARG+  R +C+IPVSAHGTNPA+A M GMK+V V +   G++++E+ R  A A  D L+  M+TYPSTHGV+EE + E+C+I H++GGQVY+DGANMNA
Sbjct:  447 KVGLGFPEPLLRETGYLSHPVFQMNRAESEMMRYMRRLSDRDLALDRAMIPLGSCTMKLNAAAEMMPITWPEFGTLHPFAPADQAAGYHEAIGDLAQRLCRITGYDAMSMQPNSGAQGEYAGLLTILAYHRARGEAERTICLIPVSAHGTNPASAQMAGMKVVVVKSAPNGDVDLEDFRDKAAAAGDRLAACMITYPSTHGVFEETVREVCRITHEHGGQVYIDGANMNA 676          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_YEAST (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Saccharomyces cerevisiae GN=GCV2 PE=1 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 2.169e-76
Identity = 131/239 (54.81%), Postives = 180/239 (75.31%), Query Frame = 2
Query:   53 LAEEVETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAXGRLTA 769
            L+E+   + P    R    L + VF+ +H+E  +LRY+H LQS++LSL +SMIPLGSCTMKLN+T EMMP+TWP F+NIHPF P++Q QGY+E+  +L + LC+ITGFD  SLQPN+GA GEY GL VIR+Y +++G++HRNVC+IPVSAHGTNPA+AAM G+K+V V     G++++ +L+  AE +   L+ +M+TYPST+G++E GI     I+H  GGQVY+DGANMNA   LT+
Sbjct:  520 LSEDYSNSFPREFQRTDEILRNEVFHMHHSETAMLRYLHRLQSRDLSLANSMIPLGSCTMKLNSTVEMMPITWPQFSNIHPFQPSNQVQGYKELITSLEKDLCSITGFDGISLQPNSGAQGEYTGLRVIRSYLESKGENHRNVCLIPVSAHGTNPASAAMAGLKVVPVNCLQDGSLDLVDLKNKAEQHSKELAAVMITYPSTYGLFEPGIQHAIDIVHSFGGQVYLDGANMNAQVGLTS 758          

HSP 2 Score: 23.0978 bits (48), Expect = 2.169e-76
Identity = 11/20 (55.00%), Postives = 13/20 (65.00%), Query Frame = 1
Query:  766 SPGYIGADVCISSPQHLHSH 825
            SPG +GADVC     HL+ H
Sbjct:  758 SPGDLGADVC-----HLNLH 772          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_JANSC (Glycine dehydrogenase [decarboxylating] OS=Jannaschia sp. (strain CCS1) GN=gcvP PE=3 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 3.627e-76
Identity = 132/226 (58.41%), Postives = 171/226 (75.66%), Query Frame = 2
Query:   74 AIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            AI   L R S YLT P+F+    E E++RY+  L  ++L+L  +MIPLGSCTMKLNA  EMMP+TWP F N+HPFAPADQA+GY EM  +L   LC ITG+D+ S+QPN+GA GEYAGL+ I AYH+ARG+  RN+C+IPVSAHGTNPA+A M GM++V V +   G+I++ + R  AEA  D L+  M+TYPSTHGV+EE + E+C+I H+ GGQVY+DGAN+NA
Sbjct:  450 AISDDLLRMSDYLTHPIFHMNRAESEMMRYMRRLSDRDLALDRAMIPLGSCTMKLNAAVEMMPITWPEFGNLHPFAPADQAEGYAEMLEDLSAKLCDITGYDAMSMQPNSGAQGEYAGLLTIAAYHRARGE-TRNICLIPVSAHGTNPASAQMAGMQVVVVKSQEDGDIDLVDFRAKAEAAGDKLAACMITYPSTHGVFEESVREVCEITHELGGQVYLDGANLNA 674          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_SYNR3 (Glycine dehydrogenase [decarboxylating] OS=Synechococcus sp. (strain RCC307) GN=gcvP PE=3 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 6.186e-76
Identity = 137/244 (56.15%), Postives = 174/244 (71.31%), Query Frame = 2
Query:   23 GKSVPFTAASLAEEVETAIPSGL-TRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            G++ P  +  LA   +      L  R + +L   VF  Y +E ELLRYI  L SK+ SL H MIPLGSCTMKLNA  E+ PV+W +F  +HPF PA Q QGY ++ N L  WL TITGF + SLQPNAG+ GEYAGL+VIRA+H+ RG+ HRN+C+IP SAHGTNPA+A M GM++V+V  D  GNI+  +L   AE + D L+ LMVTYPSTHGV+E+GI +IC +IH +GGQVY+DGAN+NA
Sbjct:  438 GRTAPAISELLAATPQAKSVGELPVRPAGWLPQAVFQLYRSETELLRYIQRLVSKDFSLVHGMIPLGSCTMKLNAAAELQPVSWAAFNRLHPFVPAAQRQGYDQLINELEAWLATITGFAAVSLQPNAGSQGEYAGLLVIRAWHRQRGEGHRNICLIPTSAHGTNPASAVMAGMQVVAVQCDEAGNIDQADLAAKAEQHADQLAALMVTYPSTHGVFEQGISDICALIHRHGGQVYLDGANLNA 681          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_BARQU (Glycine dehydrogenase [decarboxylating] OS=Bartonella quintana GN=gcvP PE=3 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 3.070e-75
Identity = 128/240 (53.33%), Postives = 178/240 (74.17%), Query Frame = 2
Query:   47 ASLAEEVETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAXGRLT 766
            A L ++V   +  G  R++ +L+ P F+  H+E +++R++  L  K+L+L  +MIPLGSCTMKLNA  E+MPV+WP+ ANIHPF P + A GYQEM N L  WLC ITGF   S QPN+GA GEYAGL+ IR Y+++RG++ R +C++P SAHGTNPA+A M GM++V V   + G+++I++L+  A+ ++D L+ LM+TYPSTHGVYEE I +IC +IH+NGGQVY DGAN+NA   LT
Sbjct:  430 AQLVDQVSPRL-WGKGRDAAFLSQPFFHVVHSETDMMRFLRRLSDKDLALDRAMIPLGSCTMKLNAAAELMPVSWPTVANIHPFVPKEDAAGYQEMINQLNAWLCEITGFAQVSFQPNSGAQGEYAGLLAIRRYYQSRGENQRTLCLVPASAHGTNPASAHMAGMEVVVVKCLSDGDVDIDDLKMKAQLHKDRLAALMITYPSTHGVYEENIKDICSLIHENGGQVYFDGANLNALVGLT 668          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSP_RHOS5 (Glycine dehydrogenase [decarboxylating] OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=gcvP PE=3 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 4.010e-75
Identity = 126/229 (55.02%), Postives = 170/229 (74.24%), Query Frame = 2
Query:   65 VETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            V    P  + RES YL+ PVF+    E E++RY+  L  ++L+L  +MIPLGSCTMKLNA  EMMP+TWP FA +HPFAP +QA GY E   +L + LC ITG+D+ S+QPN+GA GEYAGL+ I AYH+ARG+  R +C+IP+SAHGTNPA+A M GMK+V V +   G++++++ R  A A  D L+  M+TYPSTHGV+EE + ++C+I H++GGQVY+DGANMNA
Sbjct:  448 VGLGFPEAMLRESAYLSHPVFDMNRAESEMMRYMRRLSDRDLALDRAMIPLGSCTMKLNAAAEMMPITWPEFATLHPFAPPEQAAGYTEAIRDLSDRLCRITGYDAMSMQPNSGAQGEYAGLLTILAYHRARGEGQRTICLIPMSAHGTNPASAQMAGMKVVVVKSAPNGDVDLDDFRDKAAAAGDRLAACMITYPSTHGVFEETVRDVCRITHEHGGQVYIDGANMNA 676          
The following BLAST results are available for this feature:
BLAST of EY659350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 368
Match NameE-valueIdentityDescription
GCSP_BRUC21.246e-7657.89Glycine dehydrogenase [decarboxylating] OS=Brucell... [more]
GCSP_AGRRK1.246e-7657.78Glycine dehydrogenase [decarboxylating] OS=Agrobac... [more]
GCSP_RHOP51.628e-7655.74Glycine dehydrogenase [decarboxylating] OS=Rhodops... [more]
GCSP_SINMW2.126e-7656.52Glycine dehydrogenase [decarboxylating] OS=Sinorhi... [more]
GCSP_RHOS12.126e-7656.52Glycine dehydrogenase [decarboxylating] OS=Rhodoba... [more]
GCSP_YEAST2.169e-7654.81Glycine dehydrogenase [decarboxylating], mitochond... [more]
GCSP_JANSC3.627e-7658.41Glycine dehydrogenase [decarboxylating] OS=Jannasc... [more]
GCSP_SYNR36.186e-7656.15Glycine dehydrogenase [decarboxylating] OS=Synecho... [more]
GCSP_BARQU3.070e-7553.33Glycine dehydrogenase [decarboxylating] OS=Bartone... [more]
GCSP_RHOS54.010e-7555.02Glycine dehydrogenase [decarboxylating] OS=Rhodoba... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-B11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659350 ID=EY659350; Name=EY659350; organism=Citrus sinensis; type=EST; length=862bp
AGCTTTTCTACTTTTCGCCGGGGGCAAATCAGTTCCATTCACTGCTGCAT
CTCTGGCTGAAGAGGTTGAGACTGCAATTCCGTCTGGATTAACAAGGGAG
AGTCCGTATCTGACAGATCCTGTTTTTAACAAATACCACACAGAGCATGA
ATTGCTTAGATACATTCATCTGTTACAATCAAAGGAGCTCTCACTATGCC
ATAGTATGATTCCATTGGGATCTTGTACAATGAAATTGAATGCAACAACT
GAAATGATGCCAGTGACATGGCCTAGCTTTGCTAACATACACCCTTTTGC
CCCTGCTGACCAGGCTCAGGGTTATCAGGAAATGTTTAACAATCTGGGTG
AGTGGCTGTGTACCATTACTGGCTTTGACTCTTTCTCTTTGCAACCAAAT
GCTGGTGCAGCTGGTGAGTATGCTGGGCTCATGGTTATCCGCGCTTATCA
TAAGGCAAGAGGAGACCATCACCGCAATGTGTGCATTATACCCGTGTCAG
CCCATGGGACAAATCCTGCTACTGCTGCCATGTGTGGAATGAAGATTGTT
TCTGTTGGAACTGATGCCAAGGGTAACATCAACATTGAAGAGTTAAGGAA
GGCCGCAGAAGCTAATAGGGACAACCTATCAACCCTTATGGTAACGTACC
CTTCAACTCATGGAGTTTATGAAGAAGGTATTGATGAGATATGCAAGATA
ATTCACGATAATGGAGGTCAAGTATATATGGACGGGGCTAACATGAATGC
TCANGGTCGTCTGACAGCCCTGGNTACATTGGAGCTGATGTTTGCATCTC
ATCTCCACAACATTTGCATTCGCATGGAGTGGNTGTCCCTGTATGGGCCT
ATTGTGTGAAGA
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