EY659350

Overview
NameEY659350
Unique NameEY659350
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_THETN (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Thermoanaerobacter tengcongensis GN=gcvPB PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 4.047e-43
Identity = 92/229 (40.17%), Postives = 134/229 (58.52%), Query Frame = 2
Query:   65 VETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            +E  +P  + RE       V     +E +++R+  LL  K   +     PLGSCTMK N        + P F  +HP+ P +  QG  ++   L + LC ITG D FSL P AGA GE  GLM+I+AYH+ R D  R   I+P SAHGTNPA+AA+ G  ++ + ++ +G I++E L+       D ++ LM+T PST G++EE I EI +++H+ GG +Y DGAN+NA
Sbjct:   32 LEDMLPKEMLREKEVDLPEV-----SEVDVIRHYTLLSQKNYGVDIGFYPLGSCTMKYNPKINEDMASLPGFTELHPYQPEETVQGALKLMYELEKALCEITGMDRFSLHPAAGAHGELTGLMIIKAYHEHRNDKKRKKIIVPDSAHGTNPASAAVAGFDVIEIKSNKEGAIDLEALKAVL---NDEVAGLMLTNPSTLGLFEENIVEIARLVHEAGGLLYYDGANLNA 252          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_NITEC (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Nitrosomonas eutropha (strain C91) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 9.016e-43
Identity = 96/238 (40.34%), Postives = 133/238 (55.88%), Query Frame = 2
Query:   38 FTAASLAEEVETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            ++ A      +  IP  L R+S  L   V     +E + +R+   L  K  S+     PLGSCTMK N          P F + HP AP D  QG+      L E L  +TG  + SL   AGA GE  G+ +IRAYH+ARGD  R   IIP +AHGTNPATA MCG K++ + TD  G++++E L+ A        + LM+T PST GV+E+ + E+ +++H+ GG +Y DGAN+NA
Sbjct:   14 YSQAPATRPAKNNIPDNLKRKSAPLLPEV-----SEMDTVRHYTRLSQKNFSIDTEFYPLGSCTMKYNPRACNALAMLPQFLSRHPLAPEDTGQGFLACMYELQEILKDVTGMSAVSLTSMAGAQGELIGITMIRAYHEARGDTERTEIIIPDAAHGTNPATAVMCGYKVIEIPTDRDGDVDMEALKAAVS---PRTAGLMLTNPSTLGVFEKKVAEMSRVVHEAGGLLYYDGANLNA 243          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_THEON (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Thermococcus onnurineus (strain NA1) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.178e-42
Identity = 94/240 (39.17%), Postives = 136/240 (56.67%), Query Frame = 2
Query:   32 VPFTAASLAEEVETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            V +T     E+VE  +P  L R+SP     +     +E E++++   L      +   + PLGSCTMK N          P  A +HP+      QG  ++   L  WL  ITG D F+LQP AGA GE+ G+M+IRAYH  RG+  R   ++P SAHGTNPA+AAM G K++ + ++  G +++E L  A     +  + LM+T P+T G++E+ I EI KI+H  GG +Y DGAN+NA
Sbjct:   21 VGYTLPKPIEDVEIRVPEKLKRKSPLNLPEL-----SEPEVVKHYTRLSGMNYGVDSGIYPLGSCTMKYNPKINEEIAGHPGVAYVHPYQDERTIQGALKIMWELEGWLKEITGMDRFTLQPAAGANGEFTGVMIIRAYHLDRGETQRTEMLVPDSAHGTNPASAAMAGFKVIEIPSNENGTVDLEALENAVS---ERTAGLMLTNPNTLGIFEDEILEIAKIVHKAGGLLYYDGANLNA 252          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_METCA (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Methylococcus capsulatus GN=gcvPB PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.178e-42
Identity = 93/225 (41.33%), Postives = 132/225 (58.67%), Query Frame = 2
Query:   77 IPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            +P  L R++P     V     TE +++R+   L  K  S+     PLGSCTMK N     +    P FA +HP       QG       L E+L T+TG  + SL P AGA GE+ G+ +IRAYH AR DH RN  ++P +AHGTNPA+AAMCG ++  + T+A G++++E L++A        + +M+T PST GV+E  I EI  ++H+ GG +Y DGAN+NA
Sbjct:   27 LPGHLLRQTPPPLPEV-----TELDVVRHYTRLSQKNFSIDTHFYPLGSCTMKYNPKAANVLARQPGFAALHPLGTERFGQGTLSCLYELQEYLKTLTGMTAVSLSPAAGAQGEFCGVAMIRAYHDARNDHERNEILVPDAAHGTNPASAAMCGYQVREIPTNADGDVDLEALKQAV---GPKTAGIMLTNPSTLGVFEHRIPEIAALVHEAGGLLYYDGANLNA 243          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_LYSSC (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Lysinibacillus sphaericus (strain C3-41) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.178e-42
Identity = 89/204 (43.63%), Postives = 127/204 (62.25%), Query Frame = 2
Query:  140 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            +E +++R+   L  +   +     PLGSCTMK N         +  FAN+HP      AQG  E+  +L   L  ITG D  +LQP AGA GE+  LM+IRA+H+A G+ HRN  I+P SAHGTNPA+A + G + ++V +D  G ++IE+LRK   A   + + LM+T P+T G++EE I E+ ++IH  GG+VY DGAN+NA
Sbjct:   52 SELDIMRHYTALSRRNHGVDSGFYPLGSCTMKYNPKINEAVARFSGFANVHPLQDESTAQGAMELLYDLQTSLVEITGMDEVTLQPAAGAHGEWTALMMIRAFHEANGEGHRNKVIVPDSAHGTNPASATVAGFETITVKSDDNGLVDIEDLRKVVGA---DTAALMLTNPNTLGLFEENIIEMAELIHSVGGKVYYDGANLNA 252          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_COXBU (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Coxiella burnetii GN=gcvPB PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.178e-42
Identity = 96/238 (40.34%), Postives = 145/238 (60.92%), Query Frame = 2
Query:   44 AASLAEEVETA-IPSGLTR-ESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            A ++A++++   IP+ L R ++P L +       +E E++R+   L ++  S+     PLGSCTMK N        + P +   HP +PA Q+Q + +    L   L  ITG +  SL   AGA GE+AG+ +I+AYH++RGD+ R   I+P +AHGTNPA+AAMCG  +  + T   G+I++E+LR+ A A     + +M+T PST GV+E  I E+ KIIH+ GG +Y DGAN+NA
Sbjct:   15 AHAIADKMDANDIPANLLRHDAPRLPEL------SELEVVRHFTRLSTQNFSIDTHFYPLGSCTMKYNPRAANRLASLPGYLKRHPLSPAPQSQAFLQCLYELQTMLTEITGMEKISLTSMAGAQGEFAGVAMIKAYHESRGDYDRTEMIVPDAAHGTNPASAAMCGFTVKEISTTKDGDIDLEKLRQMAGA---KTAGIMLTNPSTLGVFERQISEVAKIIHNAGGLLYYDGANLNA 243          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_COXBR (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.178e-42
Identity = 96/238 (40.34%), Postives = 145/238 (60.92%), Query Frame = 2
Query:   44 AASLAEEVETA-IPSGLTR-ESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            A ++A++++   IP+ L R ++P L +       +E E++R+   L ++  S+     PLGSCTMK N        + P +   HP +PA Q+Q + +    L   L  ITG +  SL   AGA GE+AG+ +I+AYH++RGD+ R   I+P +AHGTNPA+AAMCG  +  + T   G+I++E+LR+ A A     + +M+T PST GV+E  I E+ KIIH+ GG +Y DGAN+NA
Sbjct:   15 AHAIADKMDANDIPANLLRHDAPRLPEL------SELEVVRHFTRLSTQNFSIDTHFYPLGSCTMKYNPRAANRLASLPGYLKRHPLSPAPQSQAFLQCLYELQTMLTEITGMEKISLTSMAGAQGEFAGVAMIKAYHESRGDYDRTEMIVPDAAHGTNPASAAMCGFTVKEISTTKDGDIDLEKLRQMAGA---KTAGIMLTNPSTLGVFERQISEVAKIIHNAGGLLYYDGANLNA 243          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_COXBN (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Coxiella burnetii (strain Dugway 5J108-111) GN=gcvPB PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.178e-42
Identity = 96/238 (40.34%), Postives = 145/238 (60.92%), Query Frame = 2
Query:   44 AASLAEEVETA-IPSGLTR-ESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            A ++A++++   IP+ L R ++P L +       +E E++R+   L ++  S+     PLGSCTMK N        + P +   HP +PA Q+Q + +    L   L  ITG +  SL   AGA GE+AG+ +I+AYH++RGD+ R   I+P +AHGTNPA+AAMCG  +  + T   G+I++E+LR+ A A     + +M+T PST GV+E  I E+ KIIH+ GG +Y DGAN+NA
Sbjct:   15 AHAIADKMDANDIPANLLRHDAPRLPEL------SELEVVRHFTRLSTQNFSIDTHFYPLGSCTMKYNPRAANRLASLPGYLKRHPLSPAPQSQAFLQCLYELQTMLTEITGMEKISLTSMAGAQGEFAGVAMIKAYHESRGDYDRTEMIVPDAAHGTNPASAAMCGFTVKEISTTKDGDIDLEKLRQMAGA---KTAGIMLTNPSTLGVFERQISEVAKIIHNAGGLLYYDGANLNA 243          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_BACSU (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Bacillus subtilis GN=gcvPB PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.178e-42
Identity = 89/204 (43.63%), Postives = 128/204 (62.75%), Query Frame = 2
Query:  140 TEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            +E +++R+   L  +   +     PLGSCTMK N          P FA IHP    D  QG  E+  +L + L  ITG D  +LQP AGA GE+ GLM+IRAYH+ARGD  R   I+P SAHGTNPA+A + G + V+V ++ KG +++E+L++A     +  + LM+T P+T G++EE I E+ +I+H  GG++Y DGAN+NA
Sbjct:   52 SELDIMRHYTALSKRNHGVDSGFYPLGSCTMKYNPKINEKIARIPGFAAIHPLQDEDTVQGALELLYDLSKHLEEITGMDEVTLQPAAGAHGEWTGLMMIRAYHEARGDFKRTKVIVPDSAHGTNPASATVAGFETVTVKSNEKGLVDLEDLKRAV---NEETAALMLTNPNTLGLFEEQITEMAEIVHQAGGKLYYDGANLNA 252          
BLAST of EY659350 vs. ExPASy Swiss-Prot
Match: GCSPB_PYRKO (Probable glycine dehydrogenase [decarboxylating] subunit 2 OS=Pyrococcus kodakaraensis GN=gcvPB PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.538e-42
Identity = 92/240 (38.33%), Postives = 137/240 (57.08%), Query Frame = 2
Query:   32 VPFTAASLAEEVETAIPSGLTRESPYLTDPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATTEMMPVTWPSFANIHPFAPADQAQGYQEMFNNLGEWLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHKARGDHHRNVCIIPVSAHGTNPATAAMCGMKIVSVGTDAKGNINIEELRKAAEANRDNLSTLMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNA 751
            + +T     E+V+  IP  L R+SP     +     +E E++++   L      +   + PLGSCTMK N        + P  A +HP+      QG  ++   L +WL  ITG D F+LQP AGA GE+ G+ +IRAYH  RG+  R   ++P SAHGTNPA+AAM G K++ + ++  G +++E L  A     +  + LM+T P+T G++E+ I EI KI+H  GG +Y DGAN+NA
Sbjct:   21 IGYTLPKPIEDVDVDIPEKLRRKSPLNLPEL-----SEPEVVKHYTRLSEMNYGVDSGIYPLGSCTMKYNPKINEEIASHPGVAYVHPYQDEGTVQGALKIMWELEQWLKEITGMDRFTLQPAAGANGEFTGVSIIRAYHIDRGETQRTEMLVPDSAHGTNPASAAMAGFKVIEIPSNENGTVDLEALENAVS---ERTAGLMLTNPNTLGIFEDEILEIAKIVHKAGGLLYYDGANLNA 252          
The following BLAST results are available for this feature:
BLAST of EY659350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 368
Match NameE-valueIdentityDescription
GCSPB_THETN4.047e-4340.17Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_NITEC9.016e-4340.34Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_THEON1.178e-4239.17Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_METCA1.178e-4241.33Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_LYSSC1.178e-4243.63Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_COXBU1.178e-4240.34Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_COXBR1.178e-4240.34Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_COXBN1.178e-4240.34Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_BACSU1.178e-4243.63Probable glycine dehydrogenase [decarboxylating] s... [more]
GCSPB_PYRKO1.538e-4238.33Probable glycine dehydrogenase [decarboxylating] s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-B11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659350 ID=EY659350; Name=EY659350; organism=Citrus sinensis; type=EST; length=862bp
AGCTTTTCTACTTTTCGCCGGGGGCAAATCAGTTCCATTCACTGCTGCAT
CTCTGGCTGAAGAGGTTGAGACTGCAATTCCGTCTGGATTAACAAGGGAG
AGTCCGTATCTGACAGATCCTGTTTTTAACAAATACCACACAGAGCATGA
ATTGCTTAGATACATTCATCTGTTACAATCAAAGGAGCTCTCACTATGCC
ATAGTATGATTCCATTGGGATCTTGTACAATGAAATTGAATGCAACAACT
GAAATGATGCCAGTGACATGGCCTAGCTTTGCTAACATACACCCTTTTGC
CCCTGCTGACCAGGCTCAGGGTTATCAGGAAATGTTTAACAATCTGGGTG
AGTGGCTGTGTACCATTACTGGCTTTGACTCTTTCTCTTTGCAACCAAAT
GCTGGTGCAGCTGGTGAGTATGCTGGGCTCATGGTTATCCGCGCTTATCA
TAAGGCAAGAGGAGACCATCACCGCAATGTGTGCATTATACCCGTGTCAG
CCCATGGGACAAATCCTGCTACTGCTGCCATGTGTGGAATGAAGATTGTT
TCTGTTGGAACTGATGCCAAGGGTAACATCAACATTGAAGAGTTAAGGAA
GGCCGCAGAAGCTAATAGGGACAACCTATCAACCCTTATGGTAACGTACC
CTTCAACTCATGGAGTTTATGAAGAAGGTATTGATGAGATATGCAAGATA
ATTCACGATAATGGAGGTCAAGTATATATGGACGGGGCTAACATGAATGC
TCANGGTCGTCTGACAGCCCTGGNTACATTGGAGCTGATGTTTGCATCTC
ATCTCCACAACATTTGCATTCGCATGGAGTGGNTGTCCCTGTATGGGCCT
ATTGTGTGAAGA
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