EY659349

Overview
NameEY659349
Unique NameEY659349
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP2_DROME (Actin-related protein 2 OS=Drosophila melanogaster GN=Arp14D PE=2 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 2.241e-52
Identity = 105/229 (45.85%), Postives = 146/229 (63.76%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITAL-----------APSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ-MWISKGEYDESGPSIVHR 662
            GDGV+H  P+YE +ALPH   RLD+AGRD+T  L+K+L  RGY F  +A+ E VR MKEKL Y+  D E E   A  ++ + ++Y LPDG++I +G ERF  PE LFQP LI +E  GI E  +N+I   D+DIR +LY +IVLSGGSTM+PG+  R+ +EI  L             +  KI++  PP RK  V+IGG++LA ++  +   W+SK EY E G  ++ +
Sbjct:  160 GDGVTHICPVYEEFALPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRIMKEKLCYIGYDIEMEQRLALETTVLVESYTLPDGRVIKVGGERFEAPEALFQPHLINVEGPGIAELAFNTIQAADIDIRPELYKHIVLSGGSTMYPGLPSRLEREIKQLYLERVLKNDTEKLAKFKIRIEDPPRRKDMVFIGGAVLAEVTKDRDGFWMSKQEYQEQGLKVLQK 388          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP2B_XENLA (Actin-related protein 2-B OS=Xenopus laevis GN=actr2-B PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.516e-52
Identity = 100/229 (43.67%), Postives = 146/229 (63.76%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITAL-----------APSSMKIKVVAPPERKYSVWIGGSILAS-LSTFQQMWISKGEYDESGPSIVHR 662
            GDGV+H  P+YEG++LPH   RLD+AGRD+T  L+K+L  RGY F  +A+ E VR MKEKL YV  + EQE + A  ++ + ++Y LPDG++I +G ERF  PE LFQP LI +E  G+ E  +N+I   D+D R + Y +IVLSGGSTM+PG+  R+ +E+  L             S  KI++  PP RK+ V++GG++LA  +      W+++ EY E G  ++ +
Sbjct:  160 GDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMMKEKLCYVGYNIEQEQKLALETTVLVESYTLPDGRVIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRAEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGTRVLEK 388          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP2A_DANRE (Actin-related protein 2-A OS=Danio rerio GN=actr2a PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.453e-51
Identity = 100/229 (43.67%), Postives = 146/229 (63.76%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITAL-----------APSSMKIKVVAPPERKYSVWIGGSILAS-LSTFQQMWISKGEYDESGPSIVHR 662
            GDGV+H  P+YEG++LPH   RLD+AGRD+T  L+K+L  RGY F  +A+ E VR MKEKL YV  + EQE + A  ++ + ++Y LPDG++I +G ERF  PE LFQP LI +E  G+ E  +N+I   D+D R + Y +IVLSGGSTM+PG+  R+ +E+  L             S  KI++  PP RK+ V++GG++LA  +      W+++ EY E G  ++ +
Sbjct:  160 GDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMMKEKLCYVGYNIEQEQKLALETTVLVESYTLPDGRVIKVGGERFGAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRAEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVDKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTREEYQEKGTRVLEK 388          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP2_RAT (Actin-related protein 2 OS=Rattus norvegicus GN=Actr2 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.897e-51
Identity = 100/229 (43.67%), Postives = 146/229 (63.76%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITAL-----------APSSMKIKVVAPPERKYSVWIGGSILAS-LSTFQQMWISKGEYDESGPSIVHR 662
            GDGV+H  P+YEG++LPH   RLD+AGRD+T  L+K+L  RGY F  +A+ E VR +KEKL YV  + EQE + A  ++ + ++Y LPDG+II +G ERF  PE LFQP LI +E  G+ E  +N+I   D+D R + Y +IVLSGGSTM+PG+  R+ +E+  L             S  KI++  PP RK+ V++GG++LA  +      W+++ EY E G  ++ +
Sbjct:  160 GDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEK 388          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP2_MOUSE (Actin-related protein 2 OS=Mus musculus GN=Actr2 PE=1 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.897e-51
Identity = 100/229 (43.67%), Postives = 146/229 (63.76%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITAL-----------APSSMKIKVVAPPERKYSVWIGGSILAS-LSTFQQMWISKGEYDESGPSIVHR 662
            GDGV+H  P+YEG++LPH   RLD+AGRD+T  L+K+L  RGY F  +A+ E VR +KEKL YV  + EQE + A  ++ + ++Y LPDG+II +G ERF  PE LFQP LI +E  G+ E  +N+I   D+D R + Y +IVLSGGSTM+PG+  R+ +E+  L             S  KI++  PP RK+ V++GG++LA  +      W+++ EY E G  ++ +
Sbjct:  160 GDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEK 388          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP2_HUMAN (Actin-related protein 2 OS=Homo sapiens GN=ACTR2 PE=1 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.897e-51
Identity = 100/229 (43.67%), Postives = 146/229 (63.76%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITAL-----------APSSMKIKVVAPPERKYSVWIGGSILAS-LSTFQQMWISKGEYDESGPSIVHR 662
            GDGV+H  P+YEG++LPH   RLD+AGRD+T  L+K+L  RGY F  +A+ E VR +KEKL YV  + EQE + A  ++ + ++Y LPDG+II +G ERF  PE LFQP LI +E  G+ E  +N+I   D+D R + Y +IVLSGGSTM+PG+  R+ +E+  L             S  KI++  PP RK+ V++GG++LA  +      W+++ EY E G  ++ +
Sbjct:  160 GDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEK 388          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP2_CHICK (Actin-related protein 2 OS=Gallus gallus GN=ACTR2 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.897e-51
Identity = 100/229 (43.67%), Postives = 146/229 (63.76%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITAL-----------APSSMKIKVVAPPERKYSVWIGGSILAS-LSTFQQMWISKGEYDESGPSIVHR 662
            GDGV+H  P+YEG++LPH   RLD+AGRD+T  L+K+L  RGY F  +A+ E VR +KEKL YV  + EQE + A  ++ + ++Y LPDG+II +G ERF  PE LFQP LI +E  G+ E  +N+I   D+D R + Y +IVLSGGSTM+PG+  R+ +E+  L             S  KI++  PP RK+ V++GG++LA  +      W+++ EY E G  ++ +
Sbjct:  160 GDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEK 388          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP2_BOVIN (Actin-related protein 2 OS=Bos taurus GN=ACTR2 PE=1 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.897e-51
Identity = 100/229 (43.67%), Postives = 146/229 (63.76%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITAL-----------APSSMKIKVVAPPERKYSVWIGGSILAS-LSTFQQMWISKGEYDESGPSIVHR 662
            GDGV+H  P+YEG++LPH   RLD+AGRD+T  L+K+L  RGY F  +A+ E VR +KEKL YV  + EQE + A  ++ + ++Y LPDG+II +G ERF  PE LFQP LI +E  G+ E  +N+I   D+D R + Y +IVLSGGSTM+PG+  R+ +E+  L             S  KI++  PP RK+ V++GG++LA  +      W+++ EY E G  ++ +
Sbjct:  160 GDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEK 388          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP2_XENTR (Actin-related protein 2 OS=Xenopus tropicalis GN=actr2 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.478e-51
Identity = 99/229 (43.23%), Postives = 146/229 (63.76%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITAL-----------APSSMKIKVVAPPERKYSVWIGGSILAS-LSTFQQMWISKGEYDESGPSIVHR 662
            GDGV+H  P+YEG++LPH   RLD+AGRD+T  L+K+L  RGY F  +A+ E VR +KEKL YV  + EQE + A  ++ + ++Y LPDG++I +G ERF  PE LFQP LI +E  G+ E  +N+I   D+D R + Y +IVLSGGSTM+PG+  R+ +E+  L             S  KI++  PP RK+ V++GG++LA  +      W+++ EY E G  ++ +
Sbjct:  160 GDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTLPDGRVIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRPEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGTRVLEK 388          
BLAST of EY659349 vs. ExPASy Swiss-Prot
Match: ARP2A_XENLA (Actin-related protein 2-A OS=Xenopus laevis GN=actr2-A PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 2.478e-51
Identity = 99/229 (43.23%), Postives = 146/229 (63.76%), Query Frame = 3
Query:   12 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITAL-----------APSSMKIKVVAPPERKYSVWIGGSILAS-LSTFQQMWISKGEYDESGPSIVHR 662
            GDGV+H  P+YEG++LPH   RLD+AGRD+T  L+K+L  RGY F  +A+ E VR +KEKL YV  + EQE + A  ++ + ++Y LPDG++I +G ERF  PE LFQP LI +E  G+ E  +N+I   D+D R + Y +IVLSGGSTM+PG+  R+ +E+  L             S  KI++  PP RK+ V++GG++LA  +      W+++ EY E G  ++ +
Sbjct:  160 GDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTLPDGRVIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRAEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGTRVLEK 388          
The following BLAST results are available for this feature:
BLAST of EY659349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 486
Match NameE-valueIdentityDescription
ARP2_DROME2.241e-5245.85Actin-related protein 2 OS=Drosophila melanogaster... [more]
ARP2B_XENLA8.516e-5243.67Actin-related protein 2-B OS=Xenopus laevis GN=act... [more]
ARP2A_DANRE1.453e-5143.67Actin-related protein 2-A OS=Danio rerio GN=actr2a... [more]
ARP2_RAT1.897e-5143.67Actin-related protein 2 OS=Rattus norvegicus GN=Ac... [more]
ARP2_MOUSE1.897e-5143.67Actin-related protein 2 OS=Mus musculus GN=Actr2 P... [more]
ARP2_HUMAN1.897e-5143.67Actin-related protein 2 OS=Homo sapiens GN=ACTR2 P... [more]
ARP2_CHICK1.897e-5143.67Actin-related protein 2 OS=Gallus gallus GN=ACTR2 ... [more]
ARP2_BOVIN1.897e-5143.67Actin-related protein 2 OS=Bos taurus GN=ACTR2 PE=... [more]
ARP2_XENTR2.478e-5143.23Actin-related protein 2 OS=Xenopus tropicalis GN=a... [more]
ARP2A_XENLA2.478e-5143.23Actin-related protein 2-A OS=Xenopus laevis GN=act... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-B10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659349 ID=EY659349; Name=EY659349; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGGGTGATGGTGTCTCTCATACTGTACCAATCTATGAGGGA
TATGCCCTTCCTCATGCCATTCTTCGTTTGGACTTGGCTGGTCGTGATCT
CACTGATGCATTGATGAAGATTCTTACTGAGAGAGGTTACATGTTTACCA
CCACAGCCGAACGGGAAATTGTCCGTGACATGAAGGAGAAGCTTGCTTAT
GTTGCCCTAGACTATGAGCAAGAACTTGAGACTGCCAAGAGCAGCTCATC
TGTTGAGAAGAACTATGAGCTGCCTGATGGCCAGATCATCACCATTGGAG
CTGAAAGATTCCGTTGCCCAGAAGTTCTGTTCCAGCCATCTCTCATCGGA
ATGGAAGCTGCTGGTATTCATGAGACTACCTACAACTCCATCATGAAGTG
TGATGTGGATATTAGAAAGGATCTGTATGGTAACATTGTTCTCAGTGGGG
GTTCAACTATGTTCCCTGGTATTGCCGACCGTATGAGCAAGGAAATCACA
GCACTTGCTCCAAGCAGCATGAAGATCAAGGTCGTGGCTCCACCAGAGAG
AAAATACAGTGTTTGGATTGGAGGATCAATCCTTGCATCCCTCAGCACCT
TCCAGCAGATGTGGATCTCAAAGGGCGAGTATGATGAGTCTGGTCCATCC
ATTGTCCACAGGAAATGCTTCTAAGTTCTTTAAGTGCTTGATGGGTGAGT
TCTTTTTTTCCATTTAGTTGGTTTTTTGTGTCTCGTTTCGCGAACTCAAG
TTGGTTGACATGGAGAAGTGCTAAGGATGGGGCCATTGAANGAGGCATAT
CTCGATATTTGATGTATTATACAGCTTCTTACAGCGTTTGAGGGGGGCTT
TATTCTGTACTCACCATCTTCCNTTGCTTGCATTCATCT
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