EY659348
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659348 vs. ExPASy Swiss-Prot
Match: RBS_ANASP (Ribulose bisphosphate carboxylase small chain OS=Anabaena sp. (strain PCC 7120) GN=cbbS PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.797e-19 Identity = 45/111 (40.54%), Postives = 67/111 (60.36%), Query Frame = 1 Query: 16 KNLETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 348 + ETLSYLPPL+D + K++ Y+L G+IP +EF S P YWT+WKLP++G + +VL EV + +YP ++R++GFDN +Q Q +SF+ KP Sbjct: 8 RRYETLSYLPPLTDVQIEKQVQYILSQGYIPAVEFN---------EVSEPTEL---YWTLWKLPLFGAKTSREVLAEVQSCRSQYPGHYIRVVGFDNIKQCQILSFIVHKP 106
BLAST of EY659348 vs. ExPASy Swiss-Prot
Match: RBS_CYAPA (Ribulose bisphosphate carboxylase small chain OS=Cyanophora paradoxa GN=rbcS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 6.890e-18 Identity = 39/111 (35.14%), Postives = 67/111 (60.36%), Query Frame = 1 Query: 16 KNLETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 348 + ET SYLPPL+D+ + +++ Y L +G+ P +EF S G + WT+WKLP++G +VL E+ ++++P++++R++ FD+ RQVQ + FL KP Sbjct: 7 RKFETFSYLPPLNDQQIARQLQYALSNGYSPAIEF------------SFTGKAEDLVWTLWKLPLFGAQSPEEVLSEIQACKQQFPNAYIRVVAFDSIRQVQTLMFLVYKP 105
BLAST of EY659348 vs. ExPASy Swiss-Prot
Match: RBS2_THIFE (Ribulose bisphosphate carboxylase small chain 2 OS=Thiobacillus ferrooxidans GN=cbbS2 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.618e-17 Identity = 45/112 (40.18%), Postives = 63/112 (56.25%), Query Frame = 1 Query: 1 PASGLKNLETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFL 336 PAS ETLSYLP L+ + + ++++Y++ GW P +E H+ P G YW MWKLPM+G TD +LKE K PH+ VRI+G+DN +Q Q S + Sbjct: 14 PASA--KFETLSYLPALTADEIRQQVAYIVSKGWNPAVE------------HTEPENAFGNYWYMWKLPMFGETDVDTILKEAERCHKRNPHNHVRIVGYDNFKQSQGTSLV 111
BLAST of EY659348 vs. ExPASy Swiss-Prot
Match: RBS_PSEHY (Ribulose bisphosphate carboxylase small chain OS=Pseudomonas hydrogenothermophila GN=cbbS PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.937e-16 Identity = 40/111 (36.04%), Postives = 60/111 (54.05%), Query Frame = 1 Query: 16 KNLETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 348 K ET SYLP +S E + K+I Y++ GW P +E H P YW MWKLPM+G TD +++ E+ ++ P+ +++IG+DN RQ Q + L +P Sbjct: 24 KRFETFSYLPQMSAEEIRKQIEYIVSKGWNPAIE------------HCEPENAILHYWYMWKLPMFGETDVDKIIAEIEACKRSNPNHLIKLIGYDNIRQTQGTAMLVYRP 122
BLAST of EY659348 vs. ExPASy Swiss-Prot
Match: RBS2_ACECL (Ribulose bisphosphate carboxylase small chain 2 (Fragment) OS=Acetabularia cliftonii GN=RBCS-2 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.450e-15 Identity = 34/64 (53.12%), Postives = 44/64 (68.75%), Query Frame = 1 Query: 160 SPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 351 S Y D RYWTMWKLPM+GCTD +QVL E+ K +P +++R++ FD RQVQ FL +PP Sbjct: 10 SSTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 73
BLAST of EY659348 vs. ExPASy Swiss-Prot
Match: RBS2_HYDMR (Ribulose bisphosphate carboxylase small chain 2 OS=Hydrogenovibrio marinus GN=cbbS-2 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.180e-15 Identity = 38/104 (36.54%), Postives = 55/104 (52.88%), Query Frame = 1 Query: 22 LETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISF 333 LET S+LP + + + +I Y++ GW P LE H +P YW MWKLPM+G D VL E+ + + YP+ +R+IG+DN Q Q +F Sbjct: 14 LETFSFLPEFTADEIYDQIVYIINQGWTPALE------------HEAPEAASSHYWGMWKLPMFGTRDPNAVLAEIDQCRAAYPNHMIRLIGYDNYTQCQGHNF 105
BLAST of EY659348 vs. ExPASy Swiss-Prot
Match: RBS2_CHRVI (Ribulose bisphosphate carboxylase small chain 2 OS=Chromatium vinosum GN=cbbS2 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.130e-15 Identity = 41/108 (37.96%), Postives = 58/108 (53.70%), Query Frame = 1 Query: 25 ETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 348 ET SYLPPL+ E +L++I Y+L +GW LE H P YW MWK+P +G D +L E+ ++ YP VR++G+D Q + SFLA +P Sbjct: 17 ETFSYLPPLNREEILEQILYILDNGWNASLE------------HEHPDRAFEYYWPMWKMPFFGEQDPNVILTEIESCRRSYPDHHVRLVGYDTYAQSKGHSFLAHRP 112
BLAST of EY659348 vs. ExPASy Swiss-Prot
Match: RBS1_HYDMR (Ribulose bisphosphate carboxylase small chain 1 OS=Hydrogenovibrio marinus GN=cbbS-1 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.130e-15 Identity = 41/110 (37.27%), Postives = 58/110 (52.73%), Query Frame = 1 Query: 16 KNLETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAK 345 + ET SYLP ++ + + ++ Y++ GW P +E HS P YW MWKLPM+G TDA VL EV K P++ VR+IG+DN Q Q + L + Sbjct: 17 RKAETFSYLPKMTTDQIKAQVEYIISKGWNPAIE------------HSEPENAFSYYWYMWKLPMFGDTDANVVLAEVDACIKANPNNHVRLIGYDNYAQSQGANMLVKR 114
BLAST of EY659348 vs. ExPASy Swiss-Prot
Match: RBS1_CHRVI (Ribulose bisphosphate carboxylase small chain 1 OS=Chromatium vinosum GN=cbbS1 PE=1 SV=4) HSP 1 Score: 80.4925 bits (197), Expect = 7.130e-15 Identity = 38/100 (38.00%), Postives = 54/100 (54.00%), Query Frame = 1 Query: 16 KNLETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQ 315 + ET SYLP + + + K++ Y++ GW P +E H+ P YW MWKLPM+G TD +LKE K +P++ VR+IGFDN Q Sbjct: 17 RKFETFSYLPRMDADRIRKQVEYIVSKGWNPAIE------------HTEPENAFDHYWYMWKLPMFGETDIDTILKEAEACHKAHPNNHVRLIGFDNYAQ 104
BLAST of EY659348 vs. ExPASy Swiss-Prot
Match: RBS_ALVHS (Ribulose bisphosphate carboxylase small chain OS=Alvinoconcha hessleri symbiotic bacterium GN=cbbS PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.588e-14 Identity = 40/112 (35.71%), Postives = 56/112 (50.00%), Query Frame = 1 Query: 16 KNLETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 351 + ET SYLP L E + K++ Y++ GW P +E H+ P YW MWKLPM+G TD +L E K +P VR+IG+DN Q Q + + + P Sbjct: 17 RKFETFSYLPELGVEKIRKQVEYIVSKGWNPAVE------------HTEPENAFDHYWYMWKLPMFGETDVDAILAEAEACHKAHPSHHVRLIGYDNYAQSQGTAMVIFRGP 116 The following BLAST results are available for this feature:
BLAST of EY659348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 126
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659348 ID=EY659348; Name=EY659348; organism=Citrus sinensis; type=EST; length=598bpback to top |