EY659348
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659348 vs. ExPASy Swiss-Prot
Match: RBS_THIDA (Ribulose bisphosphate carboxylase small chain OS=Thiobacillus denitrificans (strain ATCC 25259) GN=cbbS PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.709e-14 Identity = 40/107 (37.38%), Postives = 58/107 (54.21%), Query Frame = 1 Query: 1 PASGLKNLETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQ 321 PAS + ET SYLP ++ + K++ YL+ GW P +E H+ P + YW MWKLPM+G TD ++L E K P++ VR++G+DN Q Q Sbjct: 14 PAS--RKFETFSYLPAMNAADIRKQVEYLVSKGWNPAIE------------HTEPEHLMDSYWYMWKLPMFGETDIDRILGEAEACHKANPNNHVRLVGYDNFAQSQ 106
BLAST of EY659348 vs. ExPASy Swiss-Prot
Match: RBS_RHOCA (Ribulose bisphosphate carboxylase small chain OS=Rhodobacter capsulatus GN=cbbS PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.673e-13 Identity = 34/102 (33.33%), Postives = 56/102 (54.90%), Query Frame = 1 Query: 16 KNLETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQ 321 + + T SYLPP+ + + +++ +++++GW P +E H+ P + YW MWKLPM+G TD +L E+ + P VR+IG+DN Q Q Sbjct: 17 RKMGTFSYLPPMGEAEIRRQVEWIVKNGWNPGIE------------HTEPDFAAQIYWYMWKLPMFGETDVDAILAELKACHEANPGHHVRLIGYDNFTQSQ 106
BLAST of EY659348 vs. ExPASy Swiss-Prot
Match: RBS1_THIFE (Ribulose bisphosphate carboxylase small chain 1 OS=Thiobacillus ferrooxidans GN=cbbS1 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.312e-12 Identity = 36/104 (34.62%), Postives = 53/104 (50.96%), Query Frame = 1 Query: 25 ETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFL 336 ET SYLP + E + ++I+YL+ GW P +E H P YW MWKLPM+G V+ E+ + +P VR++G+DN Q Q +F+ Sbjct: 14 ETFSYLPAMGPEKMRRQIAYLINQGWNPGIE------------HVEPERASTYYWYMWKLPMFGEQSVDTVIMELEACHRAHPGHHVRLVGYDNYSQSQGSAFV 105
BLAST of EY659348 vs. ExPASy Swiss-Prot
Match: RBS_NITVU (Ribulose bisphosphate carboxylase small chain OS=Nitrobacter vulgaris GN=cbbS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.325e-12 Identity = 36/108 (33.33%), Postives = 57/108 (52.78%), Query Frame = 1 Query: 13 LKNLETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFL 336 LK ET SYLP ++ E + ++I++ + GW P +E EKG + YW MWKLP++G V+ E+ +E+P VR + +DN Q Q ++F+ Sbjct: 9 LKKYETFSYLPQMTPEQVRRQIAHAIAQGWNPAVE-HTEKGTPAK----------ASYWYMWKLPLFGEQSVDAVVAEIEACHREFPDQMVRFVAYDNYAQSQGMAFV 105
BLAST of EY659348 vs. ExPASy Swiss-Prot
Match: RBS_SYNPX (Ribulose bisphosphate carboxylase small chain OS=Synechococcus sp. (strain WH8102) GN=cbbS PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.378e-12 Identity = 34/105 (32.38%), Postives = 52/105 (49.52%), Query Frame = 1 Query: 22 LETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFL 336 LET +LPP++ + + +I+Y++ GW P +E H P YW+ WKLP +G D V+ E+ + YP VRI+G+D Q Q F+ Sbjct: 16 LETFGFLPPMTQDEIYDQIAYIIAQGWSPLVE------------HVHPSNSMATYWSYWKLPFFGEKDLNVVVSELEACHRAYPDHHVRIVGYDAYTQSQGACFV 108
BLAST of EY659348 vs. ExPASy Swiss-Prot
Match: RBS_SYNPW (Ribulose bisphosphate carboxylase small chain OS=Synechococcus sp. (strain WH7803) GN=cbbS PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.378e-12 Identity = 34/105 (32.38%), Postives = 52/105 (49.52%), Query Frame = 1 Query: 22 LETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFL 336 LET +LPP++ + + +I+Y++ GW P +E H P YW+ WKLP +G D V+ E+ + YP VRI+G+D Q Q F+ Sbjct: 16 LETFGFLPPMTQDEIYDQIAYIIAQGWSPLVE------------HVHPSNSMATYWSYWKLPFFGEKDLNVVVSELEACHRAYPDHHVRIVGYDAYTQSQGACFV 108 The following BLAST results are available for this feature:
BLAST of EY659348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 126
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659348 ID=EY659348; Name=EY659348; organism=Citrus sinensis; type=EST; length=598bpback to top |