EY659348
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659348 vs. ExPASy Swiss-Prot
Match: RBS1_ORYSI (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Oryza sativa subsp. indica GN=RBCS PE=2 SV=2) HSP 1 Score: 187.193 bits (474), Expect = 5.409e-47 Identity = 87/118 (73.73%), Postives = 99/118 (83.90%), Query Frame = 1 Query: 1 PASGLKNLETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 354 P G+K ETLSYLPPL+ E LLK+I YLLRS W+PCLEF + G+VYRE+H SPGYYDGRYWTMWKLPM+GCTDATQVLKE+ E +K YP +FVRIIGFDN RQVQ ISF+A KPPG Sbjct: 52 PIEGIKKFETLSYLPPLTVEDLLKQIEYLLRSKWVPCLEFS-KVGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLISFIAYKPPG 168
BLAST of EY659348 vs. ExPASy Swiss-Prot
Match: RBS_HEVBR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Hevea brasiliensis GN=RBCS PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 7.064e-47 Identity = 86/118 (72.88%), Postives = 95/118 (80.51%), Query Frame = 1 Query: 1 PASGLKNLETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 354 P G K ETLSYLPPL+ E L KE+ YLLR GW+PCLEFELE G VYRE+H SPGYYDGRYWTMWKLPM+GCTDA QVL+E+ E+ K YP + RIIGFDN RQVQCISFLA KP G Sbjct: 64 PPRGKKFYETLSYLPPLTREQLAKEVEYLLRKGWVPCLEFELEHGTVYREYHRSPGYYDGRYWTMWKLPMFGCTDAVQVLQELDEMIKAYPDCYGRIIGFDNVRQVQCISFLAYKPKG 181
BLAST of EY659348 vs. ExPASy Swiss-Prot
Match: RBS5_MESCR (Ribulose bisphosphate carboxylase small chain 5, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-5 PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 9.226e-47 Identity = 80/116 (68.97%), Postives = 98/116 (84.48%), Query Frame = 1 Query: 1 PASGLKNLETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 348 P G+K ETLSYLPPLS+E+LLKE+ YLL +GW+PCLEFE G+VYREH ++PGYYDGRYWTMWKLPM+GCTD +QV+ E+ E +K YP +F+RIIGFDN RQVQC+SF+A KP Sbjct: 62 PPLGMKKFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCVSFIAYKP 177
BLAST of EY659348 vs. ExPASy Swiss-Prot
Match: RBS4_MESCR (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Mesembryanthemum crystallinum GN=RBCS-4 PE=2 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 9.226e-47 Identity = 80/116 (68.97%), Postives = 98/116 (84.48%), Query Frame = 1 Query: 1 PASGLKNLETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 348 P G+K ETLSYLPPLS+E+LLKE+ YLL +GW+PCLEFE G+VYREH ++PGYYDGRYWTMWKLPM+GCTD +QV+ E+ E +K YP +F+RIIGFDN RQVQC+SF+A KP Sbjct: 63 PPLGMKKFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQVQCVSFIAYKP 178
BLAST of EY659348 vs. ExPASy Swiss-Prot
Match: RBS2_NICSY (Ribulose bisphosphate carboxylase small chain S41, chloroplastic OS=Nicotiana sylvestris PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 9.226e-47 Identity = 83/118 (70.34%), Postives = 98/118 (83.05%), Query Frame = 1 Query: 1 PASGLKNLETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 354 P K ETLSYLP LS+E LL+E+ YLL++GW+PCLEFE E G+VYRE++ SPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K YP +++RIIGFDN RQVQCISF+A KP G Sbjct: 63 PPINKKKYETLSYLPDLSEEQLLREVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 180
BLAST of EY659348 vs. ExPASy Swiss-Prot
Match: RBS_HELAN (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Helianthus annuus GN=RBCS PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.205e-46 Identity = 81/118 (68.64%), Postives = 98/118 (83.05%), Query Frame = 1 Query: 1 PASGLKNLETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 354 P GLK ETLSYLPPL++ L KE+ YLLR W+PCLEFELE G+VYRE+ SPGYYDGRYWTMWKLPM+GCTD+ QV+KE+ E +KEYP +++RIIGFDN RQVQCI F+A++P G Sbjct: 60 PPLGLKKYETLSYLPPLTETQLAKEVDYLLRKKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELAECKKEYPQAWIRIIGFDNVRQVQCIMFIASRPDG 177
BLAST of EY659348 vs. ExPASy Swiss-Prot
Match: RBS_FAGCR (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Fagus crenata GN=RBCS1 PE=2 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.205e-46 Identity = 85/117 (72.65%), Postives = 96/117 (82.05%), Query Frame = 1 Query: 1 PASGLKNLETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 351 P GL+ ETLSYLPPLS E+L K+I YL+ GWIPCLEFELE +VYRE++ SPGYYDGRYW MWKLPM+GCTDATQVL E+ E K YP S +RIIGFDNKRQVQCISF+A KPP Sbjct: 64 PPLGLQKFETLSYLPPLSIESLAKQIEYLILKGWIPCLEFELEHPFVYRENNRSPGYYDGRYWVMWKLPMFGCTDATQVLAELQEASKTYPTSHIRIIGFDNKRQVQCISFIAYKPP 180
BLAST of EY659348 vs. ExPASy Swiss-Prot
Match: RBS6_LEMGI (Ribulose bisphosphate carboxylase small chain SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.205e-46 Identity = 85/116 (73.28%), Postives = 97/116 (83.62%), Query Frame = 1 Query: 1 PASGLKNLETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 348 P GLK ETLSYLPPLS E L KE+ YLLR+ W+PC+EF E G+VYRE+H+SPGYYDGRYWTMWKLPM+GCTDA+QV+ EV E +K YP FVRIIGFDNKRQVQCISF+A KP Sbjct: 62 PPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKE-GFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 176
BLAST of EY659348 vs. ExPASy Swiss-Prot
Match: RBS5_LEMGI (Ribulose bisphosphate carboxylase small chain SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.205e-46 Identity = 85/116 (73.28%), Postives = 97/116 (83.62%), Query Frame = 1 Query: 1 PASGLKNLETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 348 P GLK ETLSYLPPLS E L KE+ YLLR+ W+PC+EF E G+VYRE+H+SPGYYDGRYWTMWKLPM+GCTDA+QV+ EV E +K YP FVRIIGFDNKRQVQCISF+A KP Sbjct: 62 PPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKE-GFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 176
BLAST of EY659348 vs. ExPASy Swiss-Prot
Match: RBS4_LEMGI (Ribulose bisphosphate carboxylase small chain SSU40B, chloroplastic OS=Lemna gibba GN=SSU40B PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.205e-46 Identity = 85/116 (73.28%), Postives = 97/116 (83.62%), Query Frame = 1 Query: 1 PASGLKNLETLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 348 P GLK ETLSYLPPLS E L KE+ YLLR+ W+PC+EF E G+VYRE+H+SPGYYDGRYWTMWKLPM+GCTDA+QV+ EV E +K YP FVRIIGFDNKRQVQCISF+A KP Sbjct: 62 PPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKE-GFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQVQCISFIAYKP 176 The following BLAST results are available for this feature:
BLAST of EY659348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 126
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659348 ID=EY659348; Name=EY659348; organism=Citrus sinensis; type=EST; length=598bpback to top |