EY659342

Overview
NameEY659342
Unique NameEY659342
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig873 contig Csv1_Contig873:158..1046. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659342 vs. ExPASy Swiss-Prot
Match: SCMC1_HUMAN (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Homo sapiens GN=SLC25A24 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 2.051e-13
Identity = 45/161 (27.95%), Postives = 78/161 (48.45%), Query Frame = 3
Query:  261 PFERTKILLQTRTEGFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNYPSMGSGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGXSLRSGIRSICAQPAYSGVKDVLTSVY*EGGIRALYSSIRSTLAGILP 743
            P +R KI++Q          ++   ++++K+ GI   ++GNG +V++I P  A+ F  YE+Y+  +      +G+      ++GS+AG TA    YP+++ +T+LA  V  TG               YSG+ D    +    G+ A Y      L GI+P
Sbjct:  214 PLDRLKIMMQVHGSKSDKMNIFGGFRQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLLTEEGQKIGT--FERFISGSMAGATAQTFIYPMEVMKTRLA--VGKTG--------------QYSGIYDCAKKILKHEGLGAFYKGYVPNLLGIIP 356          
BLAST of EY659342 vs. ExPASy Swiss-Prot
Match: ADT_DICDI (Mitochondrial substrate carrier family protein ancA OS=Dictyostelium discoideum GN=ancA PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.498e-13
Identity = 48/167 (28.74%), Postives = 87/167 (52.10%), Query Frame = 3
Query:  261 PFERTKILLQTRTEGFQS------RGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNYPSMGSGPVI--DLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGXSLRSGIRSICAQPAYSGVKDVLTSVY*EGGIRALYSSIRSTLAGI 737
            P ER K+LLQ ++   Q       +G+     ++ K++G++  ++GN A+V+R  P  AL+F   ++Y+ + + +            +LL+G  AG T++L  YPLD ART+LA   V TG + +           ++G+ + ++S+Y   G+  LY     ++ GI
Sbjct:   32 PIERVKLLLQVQSASTQIAADKQYKGIVDCFVRVSKEQGVISLWRGNLANVIRYFPTQALNFAFKDKYKKFFVRHTAKENPTKFFIGNLLSGGAAGATSLLFVYPLDFARTRLAAD-VGTGSARQ-----------FTGLGNCISSIYKRDGLIGLYRGFGVSVGGI 186          
BLAST of EY659342 vs. ExPASy Swiss-Prot
Match: ADT1_BOVIN (ADP/ATP translocase 1 OS=Bos taurus GN=SLC25A4 PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 3.498e-13
Identity = 49/169 (28.99%), Postives = 86/169 (50.89%), Query Frame = 3
Query:  261 PFERTKILLQTR------TEGFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWI---INNYPSMGSGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGXSLRSGIRSICAQPAYSGVKDVLTSVY*EGGIRALYSSIRSTLAGIL 740
            P ER K+LLQ +      +   Q +G+   + ++ K++G L F++GN A+V+R  P  AL+F   ++Y+      ++ +         +L +G  AG T++   YPLD ART+LA    D G           AQ  ++G+ + +T ++   G+R LY     ++ GI+
Sbjct:   28 PIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLA---ADVGKG--------AAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGII 185          
BLAST of EY659342 vs. ExPASy Swiss-Prot
Match: TPC1_COCIM (Mitochondrial thiamine pyrophosphate carrier 1 OS=Coccidioides immitis GN=TPC1 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.568e-13
Identity = 55/161 (34.16%), Postives = 76/161 (47.20%), Query Frame = 3
Query:  282 LLQTRTEGFQSRGVYQSLKKLLKQ----EGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNYPSMGSGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGXSLRSGIRSICAQPAYSGVKDVLTSVY*EGGIRALYSSIRSTLAGILPMLA 752
            LL+TR     +  +Y SL   ++     EG  GF++G  A+V +IVPY  L F TYE  RV I + +   GSG   D  AG +A   A    +PLDL R +L  Q       +   I      P Y+GV   +  V  +GG+R LY  +  +L    P  A
Sbjct:  146 LLRTRFAAQGNDKIYPSLLTAIRSIHAHEGSRGFFRGVSAAVAQIVPYMGLFFATYESVRVPISSLHLPFGSG---DATAGVIASVIAKTGVFPLDLVRKRLQVQGPTRSRYIHQNI------PEYNGVLSTMKMVLRDGGVRGLYRGLTVSLIKAAPASA 297          
BLAST of EY659342 vs. ExPASy Swiss-Prot
Match: SCMC1_RABIT (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Oryctolagus cuniculus GN=SLC25A24 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.568e-13
Identity = 45/161 (27.95%), Postives = 80/161 (49.69%), Query Frame = 3
Query:  261 PFERTKILLQTRTEGFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNYPSMGSGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGXSLRSGIRSICAQPAYSGVKDVLTSVY*EGGIRALYSSIRSTLAGILP 743
            P +R K+++Q    G +S  ++   ++++K+ G+   ++GNG +V++I P  A+ F  YE+Y+  +      +G+      ++GS+AG TA    YP+++ +T+LA  V  TG               YSG+ D    +    G  A Y      L GI+P
Sbjct:  214 PLDRLKVMMQVH--GSKSMNIFGGFRQMIKEGGVRSLWRGNGTNVIKIAPETAVKFWVYEQYKKLLTEEGQKIGT--FERFISGSMAGATAQTFIYPMEVMKTRLA--VGKTG--------------QYSGIYDCAKKILKYEGFGAFYKGYVPNLLGIIP 354          
BLAST of EY659342 vs. ExPASy Swiss-Prot
Match: ADT3_PIG (ADP/ATP translocase 3 OS=Sus scrofa GN=SLC25A6 PE=2 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 4.568e-13
Identity = 50/169 (29.59%), Postives = 84/169 (49.70%), Query Frame = 3
Query:  261 PFERTKILLQTR------TEGFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYR---VWIINNYPSMGSGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGXSLRSGIRSICAQPAYSGVKDVLTSVY*EGGIRALYSSIRSTLAGIL 740
            P ER K+LLQ +          Q +G+   + ++ K++G+L F++GN A+V+R  P  AL+F   ++Y+   +  ++ +         +L +G  AG T++   YPLD ART+LA    D G S          +  + G+ D L  +    GIR LY     ++ GI+
Sbjct:   28 PIERVKLLLQVQHASKQIAADKQYKGIVDCIVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKHTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLA---ADVGKS--------ATEREFKGLGDCLVKITKSDGIRGLYQGFNVSVQGII 185          
BLAST of EY659342 vs. ExPASy Swiss-Prot
Match: ADT1_RAT (ADP/ATP translocase 1 OS=Rattus norvegicus GN=Slc25a4 PE=1 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 4.568e-13
Identity = 49/169 (28.99%), Postives = 86/169 (50.89%), Query Frame = 3
Query:  261 PFERTKILLQTR------TEGFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWI---INNYPSMGSGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGXSLRSGIRSICAQPAYSGVKDVLTSVY*EGGIRALYSSIRSTLAGIL 740
            P ER K+LLQ +      +   Q +G+   + ++ K++G L F++GN A+V+R  P  AL+F   ++Y+      ++ +         +L +G  AG T++   YPLD ART+LA    D G           +Q  ++G+ D LT ++   G++ LY     ++ GI+
Sbjct:   28 PIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLA---ADVGKG--------SSQREFNGLGDCLTKIFKSDGLKGLYQGFSVSVQGII 185          
BLAST of EY659342 vs. ExPASy Swiss-Prot
Match: ADT1_MOUSE (ADP/ATP translocase 1 OS=Mus musculus GN=Slc25a4 PE=1 SV=4)

HSP 1 Score: 75.485 bits (184), Expect = 4.568e-13
Identity = 49/169 (28.99%), Postives = 86/169 (50.89%), Query Frame = 3
Query:  261 PFERTKILLQTR------TEGFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWI---INNYPSMGSGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGXSLRSGIRSICAQPAYSGVKDVLTSVY*EGGIRALYSSIRSTLAGIL 740
            P ER K+LLQ +      +   Q +G+   + ++ K++G L F++GN A+V+R  P  AL+F   ++Y+      ++ +         +L +G  AG T++   YPLD ART+LA    D G           +Q  ++G+ D LT ++   G++ LY     ++ GI+
Sbjct:   28 PIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLA---ADVGKG--------SSQREFNGLGDCLTKIFKSDGLKGLYQGFSVSVQGII 185          
BLAST of EY659342 vs. ExPASy Swiss-Prot
Match: SCMC1_MOUSE (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Mus musculus GN=Slc25a24 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.967e-13
Identity = 45/161 (27.95%), Postives = 79/161 (49.07%), Query Frame = 3
Query:  261 PFERTKILLQTRTEGFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNYPSMGSGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGXSLRSGIRSICAQPAYSGVKDVLTSVY*EGGIRALYSSIRSTLAGILP 743
            P +R K+++Q    G +S  ++   ++++K+ GI   ++GNG +V++I P  A+ F  YE+Y+  +      +G+      ++GS+AG TA    YP+++ +T+LA  V  TG               YSG+      +    G  A Y      L GI+P
Sbjct:  214 PLDRLKVMMQVH--GSKSMNIFGGFRQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLLTEEGQKLGT--FERFISGSMAGATAQTFIYPMEVLKTRLA--VAKTG--------------QYSGIYGCAKKILKHEGFGAFYKGYIPNLLGIIP 354          
BLAST of EY659342 vs. ExPASy Swiss-Prot
Match: ADT3_HUMAN (ADP/ATP translocase 3 OS=Homo sapiens GN=SLC25A6 PE=1 SV=4)

HSP 1 Score: 75.0998 bits (183), Expect = 5.967e-13
Identity = 49/169 (28.99%), Postives = 84/169 (49.70%), Query Frame = 3
Query:  261 PFERTKILLQTR------TEGFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYR---VWIINNYPSMGSGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGXSLRSGIRSICAQPAYSGVKDVLTSVY*EGGIRALYSSIRSTLAGIL 740
            P ER K+LLQ +          Q +G+   + ++ K++G+L F++GN A+V+R  P  AL+F   ++Y+   +  ++ +         +L +G  AG T++   YPLD ART+LA  V  +G            +  + G+ D L  +    GIR LY     ++ GI+
Sbjct:   28 PIERVKLLLQVQHASKQIAADKQYKGIVDCIVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKHTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKSG-----------TEREFRGLGDCLVKITKSDGIRGLYQGFSVSVQGII 185          
The following BLAST results are available for this feature:
BLAST of EY659342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
SCMC1_HUMAN2.051e-1327.95Calcium-binding mitochondrial carrier protein SCaM... [more]
ADT_DICDI3.498e-1328.74Mitochondrial substrate carrier family protein anc... [more]
ADT1_BOVIN3.498e-1328.99ADP/ATP translocase 1 OS=Bos taurus GN=SLC25A4 PE=... [more]
TPC1_COCIM4.568e-1334.16Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
SCMC1_RABIT4.568e-1327.95Calcium-binding mitochondrial carrier protein SCaM... [more]
ADT3_PIG4.568e-1329.59ADP/ATP translocase 3 OS=Sus scrofa GN=SLC25A6 PE=... [more]
ADT1_RAT4.568e-1328.99ADP/ATP translocase 1 OS=Rattus norvegicus GN=Slc2... [more]
ADT1_MOUSE4.568e-1328.99ADP/ATP translocase 1 OS=Mus musculus GN=Slc25a4 P... [more]
SCMC1_MOUSE5.967e-1327.95Calcium-binding mitochondrial carrier protein SCaM... [more]
ADT3_HUMAN5.967e-1328.99ADP/ATP translocase 3 OS=Homo sapiens GN=SLC25A6 P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-B03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659342 ID=EY659342; Name=EY659342; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGGTGGGTGATAAAAATTTAAATAATTTGTCCAATTCACAG
AGGGTAAAGGTTACGTTTTAATTGGTTGAATTGGTTTGAGTCGGATTCAT
GGGTTCTCAGCAAGGCTCTACATTGTCAACGAATGTGGCTGGACTAGTTG
ATGGCTCGTCAGCTTGTAGAGAGGTTTCCTATGATGATAGTTTGCCTGTG
TATGTTAAGGAGCTAATTGCTGGAGGTGCTGCAGGGGCATTTGCTAAGAC
GGCTGTTGCACCTTTTGAACGGACTAAAATACTCTTGCAGACTAGAACTG
AAGGGTTCCAGTCTCGTGGAGTGTATCAATCCTTGAAGAAGTTATTGAAG
CAAGAGGGCATTCTTGGATTTTATAAGGGAAATGGAGCTAGTGTTCTTCG
GATTGTTCCTTATGCAGCCTTACATTTCATGACATATGAGGAGTATCGTG
TTTGGATCATAAATAACTATCCGTCCATGGGATCAGGTCCTGTTATAGAT
CTATTAGCTGGTTCGCTAGCTGGAGGAACAGCAGTTTTATGCACGTATCC
TTTAGATCTGGCTCGTACAAAACTTGCTTATCAGGTCGTGGACACAGGAN
GAAGTTTGAGGAGTGGTATTAGAAGTATATGTGCTCAGCCTGCATATAGT
GGCGTAAAAGATGTACTTACAAGCGTCTATTAGGAAGGGGGGATACGTGC
TCTATATTCGAGCATAAGGTCAACATTAGCTGGAATCCTCCCTATGCTGG
CCTGAAGTCCATATATATGAGGAACTAAAAGGCATGTCCCTGAGGAACAC
CAAAATCCATTGTGATGCCCCCTTCCTGGGGACCTTTGGCTGGGTATTCC
GGCAAACATTCCATACCCTTTAAAGTTGTAGGAAAAAAT
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