EY659342

Overview
NameEY659342
Unique NameEY659342
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig873 contig Csv1_Contig873:158..1046. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659342 vs. ExPASy Swiss-Prot
Match: SCMC3_MOUSE (Calcium-binding mitochondrial carrier protein SCaMC-3 OS=Mus musculus GN=Slc25a23 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.597e-12
Identity = 49/192 (25.52%), Postives = 87/192 (45.31%), Query Frame = 3
Query:  171 EVSYDDSLP-VYVKELIXXXXXXXXXXXXXXPFERTKILLQTRTEGFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNYPSMGSGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGXSLRSGIRSICAQPAYSGVKDVLTSVY*EGGIRALYSSIRSTLAGILP 743
            E S ++ L  ++ K+L+              P +R K+ +Q          +   L+ ++++ G+L  ++GNG +VL+I P +A+ FM YE+ +  I     ++        +AGSLAG TA    YP+++ +T+L  +        R+G         Y G+ D    +    G RA Y      + GI+P
Sbjct:  173 EFSQEEKLTGMWWKQLVAGAVAGAVSRTGTAPLDRLKVFMQVHASKSNRLNILGGLRNMIQEGGVLSLWRGNGINVLKIAPESAIKFMAYEQIKRAIRGQQETLHVQE--RFVAGSLAGATAQTIIYPMEVLKTRLTLR--------RTG--------QYKGLLDCAKRILEREGPRAFYRGYLPNVLGIIP 346          
BLAST of EY659342 vs. ExPASy Swiss-Prot
Match: CMC_DICDI (Calcium-binding mitochondrial carrier protein OS=Dictyostelium discoideum GN=mcfO PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.597e-12
Identity = 47/149 (31.54%), Postives = 76/149 (51.01%), Query Frame = 3
Query:  261 PFERTKILLQTRTEGFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNYPSMGSGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGXSLRSGIRSICAQPAYSGVKDVLTSVY*EGGIRALY 707
            P E  KI LQ      QS G   S   ++K+ G+ G YKG GA +LR +P++A++F TY + +  + N    +  GP+  LLAG++AG  A     P D+ +T+L              +++   +  Y+G++D    +  E G RAL+
Sbjct:  557 PLEIVKIRLQV-----QSTGPKVSAITIIKELGLAGLYKGAGACLLRDIPFSAIYFPTYAKMKTILANEDGKL--GPMDLLLAGAVAGIPAASLVTPADVIKTRLQ-------------VKANAGEQTYTGIRDCFQKILKEEGPRALF 685          
BLAST of EY659342 vs. ExPASy Swiss-Prot
Match: CMC3_CAEBR (Probable calcium-binding mitochondrial carrier CBG00135 OS=Caenorhabditis briggsae GN=CBG00135 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.597e-12
Identity = 47/161 (29.19%), Postives = 75/161 (46.58%), Query Frame = 3
Query:  261 PFERTKILLQTRTEGFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNYPSMGSGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGXSLRSGIRSICAQPAYSGVKDVLTSVY*EGGIRALYSSIRSTLAGILP 743
            PF+R K+ LQ  +      GV   +  L  + G+  F++GNG +V++I P +A+ FM+Y++ + WI              L AGS AG  +    YP+++ +T+LA +   TG   R             G+      +Y + GIR  Y      L GI+P
Sbjct:  265 PFDRIKVYLQVNSTKTNKLGVVSCVHLLHAEGGLKSFWRGNGINVIKIAPESAMKFMSYDQIKRWIQEYKGGAELTTYERLFAGSSAGAISQTAIYPMEVMKTRLALR--RTGQLDR-------------GMIHFAHKMYDKEGIRCFYKGYLPNLLGIIP 410          
BLAST of EY659342 vs. ExPASy Swiss-Prot
Match: SCMC2_HUMAN (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Homo sapiens GN=SLC25A25 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.616e-12
Identity = 43/161 (26.71%), Postives = 79/161 (49.07%), Query Frame = 3
Query:  261 PFERTKILLQTRTEGFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNYPSMGSGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGXSLRSGIRSICAQPAYSGVKDVLTSVY*EGGIRALYSSIRSTLAGILP 743
            P +R K+L+Q       + G+     +++++ G    ++GNG +VL+I P +A+ FM YE+ +  + ++  ++       L+AGSLAG  A    YP+++ +T++A +   TG               YSG+ D    +    G+ A Y      + GI+P
Sbjct:  206 PLDRLKVLMQVHASRSNNMGIVGGFTQMIREGGARSLWRGNGINVLKIAPESAIKFMAYEQIKRLVGSDQETLRIHE--RLVAGSLAGAIAQSSIYPMEVLKTRMALR--KTG--------------QYSGMLDCARRILAREGVAAFYKGYVPNMLGIIP 348          
BLAST of EY659342 vs. ExPASy Swiss-Prot
Match: ADT_SCHPO (ADP,ATP carrier protein OS=Schizosaccharomyces pombe GN=anc1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.125e-11
Identity = 49/172 (28.49%), Postives = 85/172 (49.42%), Query Frame = 3
Query:  261 PFERTKILLQTRTEGFQS-------RGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWI-----INNYPSMGSGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGXSLRSGIRSICAQPAYSGVKDVLTSVY*EGGIRALYSSIRSTLAGIL 740
            P ER K+L+Q + E  ++       +G+ +  K+   +EG++  ++GN A+VLR  P  AL+F   ++++         + Y    +G   +L +G  AG  ++L  Y LD ART+LA    D   + + G R       ++G+ DV    Y   G+R LY     ++ GI+
Sbjct:   47 PIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEGVISLWRGNTANVLRYFPTQALNFAFKDKFKKMFGYKKERDGYAKWFAG---NLASGGAAGAASLLFVYSLDYARTRLAN---DAKSAKKGGERQ------FNGLVDVYRKTYRSDGLRGLYRGFGPSVVGIV 206          
BLAST of EY659342 vs. ExPASy Swiss-Prot
Match: SCM2A_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-2-A OS=Danio rerio GN=slc25a25a PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.919e-11
Identity = 45/161 (27.95%), Postives = 79/161 (49.07%), Query Frame = 3
Query:  261 PFERTKILLQTRTEGFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNYPSMGSGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGXSLRSGIRSICAQPAYSGVKDVLTSVY*EGGIRALYSSIRSTLAGILP 743
            P +R K+L+Q      +S  +   L +++K+ G+   ++GNG +V++I P  AL FM YE+ +  + ++  ++G       +AGSLAG  A    YP+++ +T+LA +   TG               Y G+ D    +    G+ A Y      + GI+P
Sbjct:  206 PLDRLKVLMQVHGCQGKSMCLMSGLTQMIKEGGVRSLWRGNGINVIKIAPETALKFMAYEQIKRVMGSSQETLGISE--RFVAGSLAGVIAQSTIYPMEVLKTRLALR--KTG--------------QYKGISDCAKHILKTEGMSAFYKGYVPNMLGIIP 348          
BLAST of EY659342 vs. ExPASy Swiss-Prot
Match: SCMC3_HUMAN (Calcium-binding mitochondrial carrier protein SCaMC-3 OS=Homo sapiens GN=SLC25A23 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.274e-11
Identity = 44/161 (27.33%), Postives = 75/161 (46.58%), Query Frame = 3
Query:  261 PFERTKILLQTRTEGFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNYPSMGSGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGXSLRSGIRSICAQPAYSGVKDVLTSVY*EGGIRALYSSIRSTLAGILP 743
            P +R K+ +Q          +   L+ ++ + GI   ++GNG +VL+I P +A+ FM YE+ +  I+    ++        +AGSLAG TA    YP+++ +T+L  +        R+G         Y G+ D    +    G RA Y      + GI+P
Sbjct:  205 PLDRLKVFMQVHASKTNRLNILGGLRSMVLEGGIRSLWRGNGINVLKIAPESAIKFMAYEQIKRAILGQQETLHVQE--RFVAGSLAGATAQTIIYPMEVLKTRLTLR--------RTG--------QYKGLLDCARRILEREGPRAFYRGYLPNVLGIIP 347          
BLAST of EY659342 vs. ExPASy Swiss-Prot
Match: SCMC2_XENTR (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Xenopus tropicalis GN=slc25a25 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.274e-11
Identity = 43/161 (26.71%), Postives = 80/161 (49.69%), Query Frame = 3
Query:  261 PFERTKILLQTRTEGFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNYPSMGSGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGXSLRSGIRSICAQPAYSGVKDVLTSVY*EGGIRALYSSIRSTLAGILP 743
            P +R K+L+Q       +  +     +++++ GI   ++GNG +V++I P +A+ FM YE+ +  I ++  ++G      L+AGSLAG  A    YP+++ +T++A +   TG               Y G+ D    +  + G+ A Y      + GI+P
Sbjct:  250 PLDRLKVLMQVHASRSNNMSMLGGFTQMIREGGIRSLWRGNGINVIKIAPESAIKFMAYEQMKRIIGSDQETLGIHE--RLVAGSLAGVIAQSSIYPMEVLKTRMALR--KTG--------------QYQGMLDCGKKILLKEGVSAFYKGYVPNMLGIIP 392          
BLAST of EY659342 vs. ExPASy Swiss-Prot
Match: SCMC2_XENLA (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Xenopus laevis GN=slc25a25 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.274e-11
Identity = 43/161 (26.71%), Postives = 77/161 (47.83%), Query Frame = 3
Query:  261 PFERTKILLQTRTEGFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNYPSMGSGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGXSLRSGIRSICAQPAYSGVKDVLTSVY*EGGIRALYSSIRSTLAGILP 743
            P +R K+L+Q       +  +      ++++ G    ++GNG +V++I P +A+ FM YE+ +  I +N  ++G       +AGSLAG  A    YP+++ +T++A +   TG               Y GV D    +  + G+ A Y      + GI+P
Sbjct:  251 PLDRLKVLMQVHASRSNNMSILGGFTHMIREGGFRSLWRGNGINVIKIAPESAIKFMAYEQIKRIIGSNQETLGIHE--RFVAGSLAGVIAQSSIYPMEVLKTRMALR--KTG--------------QYQGVLDCGKKILLQEGLSAFYKGYVPNMLGIIP 393          
BLAST of EY659342 vs. ExPASy Swiss-Prot
Match: S2543_MOUSE (Solute carrier family 25 member 43 OS=Mus musculus GN=Slc25a43 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.274e-11
Identity = 43/164 (26.22%), Postives = 77/164 (46.95%), Query Frame = 3
Query:  261 PFERTKILLQTRTEGFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNYPSMGSGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGXSLRSGIRSICAQPAYSGVKDVLTSVY*EGGIRALYSSIRSTLAGILPMLA 752
            P E   +L Q       S G++ + +++   EG    +KGNG + LR+ P + +    Y ++ V  +++   +       ++ GSLAG  + + TYP DL +T+L  Q V               +P+Y G+    +++Y + G  ALY  +  T+ G +P  A
Sbjct:   32 PLELATVLAQVGKVQSHSLGLWATGRRVWLSEGPRALWKGNGVACLRLFPCSMVQLAAYRKFVVLFMDDLGRISQWS--SIVTGSLAGMVSTIVTYPTDLIKTRLMVQNV--------------LEPSYRGLIHAFSTIYQQEGFLALYRGVSLTVLGAVPFSA 179          
The following BLAST results are available for this feature:
BLAST of EY659342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
SCMC3_MOUSE6.597e-1225.52Calcium-binding mitochondrial carrier protein SCaM... [more]
CMC_DICDI6.597e-1231.54Calcium-binding mitochondrial carrier protein OS=D... [more]
CMC3_CAEBR6.597e-1229.19Probable calcium-binding mitochondrial carrier CBG... [more]
SCMC2_HUMAN8.616e-1226.71Calcium-binding mitochondrial carrier protein SCaM... [more]
ADT_SCHPO1.125e-1128.49ADP,ATP carrier protein OS=Schizosaccharomyces pom... [more]
SCM2A_DANRE1.919e-1127.95Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC3_HUMAN3.274e-1127.33Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC2_XENTR3.274e-1126.71Calcium-binding mitochondrial carrier protein SCaM... [more]
SCMC2_XENLA3.274e-1126.71Calcium-binding mitochondrial carrier protein SCaM... [more]
S2543_MOUSE3.274e-1126.22Solute carrier family 25 member 43 OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-B03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659342 ID=EY659342; Name=EY659342; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGGTGGGTGATAAAAATTTAAATAATTTGTCCAATTCACAG
AGGGTAAAGGTTACGTTTTAATTGGTTGAATTGGTTTGAGTCGGATTCAT
GGGTTCTCAGCAAGGCTCTACATTGTCAACGAATGTGGCTGGACTAGTTG
ATGGCTCGTCAGCTTGTAGAGAGGTTTCCTATGATGATAGTTTGCCTGTG
TATGTTAAGGAGCTAATTGCTGGAGGTGCTGCAGGGGCATTTGCTAAGAC
GGCTGTTGCACCTTTTGAACGGACTAAAATACTCTTGCAGACTAGAACTG
AAGGGTTCCAGTCTCGTGGAGTGTATCAATCCTTGAAGAAGTTATTGAAG
CAAGAGGGCATTCTTGGATTTTATAAGGGAAATGGAGCTAGTGTTCTTCG
GATTGTTCCTTATGCAGCCTTACATTTCATGACATATGAGGAGTATCGTG
TTTGGATCATAAATAACTATCCGTCCATGGGATCAGGTCCTGTTATAGAT
CTATTAGCTGGTTCGCTAGCTGGAGGAACAGCAGTTTTATGCACGTATCC
TTTAGATCTGGCTCGTACAAAACTTGCTTATCAGGTCGTGGACACAGGAN
GAAGTTTGAGGAGTGGTATTAGAAGTATATGTGCTCAGCCTGCATATAGT
GGCGTAAAAGATGTACTTACAAGCGTCTATTAGGAAGGGGGGATACGTGC
TCTATATTCGAGCATAAGGTCAACATTAGCTGGAATCCTCCCTATGCTGG
CCTGAAGTCCATATATATGAGGAACTAAAAGGCATGTCCCTGAGGAACAC
CAAAATCCATTGTGATGCCCCCTTCCTGGGGACCTTTGGCTGGGTATTCC
GGCAAACATTCCATACCCTTTAAAGTTGTAGGAAAAAAT
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