EY659342

Overview
NameEY659342
Unique NameEY659342
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig873 contig Csv1_Contig873:158..1046. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY659342 vs. ExPASy Swiss-Prot
Match: SCMC2_BOVIN (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Bos taurus GN=SLC25A25 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.526e-11
Identity = 43/161 (26.71%), Postives = 78/161 (48.45%), Query Frame = 3 
Query:  261 PFERTKILLQTRTEGFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNYPSMGSGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGXSLRSGIRSICAQPAYSGVKDVLTSVY*EGGIRALYSSIRSTLAGILP 743
            P +R K+L+Q       +  +     +++++ G    ++GNG +VL+I P +A+ FM YE+ +  I ++  ++       L+AGSLAG  A    YP+++ +T++A +   TG               YSG+ D    +    G+ A Y      + GI+P
Sbjct:  206 PLDRLKVLMQVHASRSNNMCIVGGFTQMIREGGARSLWRGNGINVLKIAPESAIKFMAYEQIKRLIGSDQETLRIHE--RLVAGSLAGAIAQSSIYPMEVLKTRMALR--KTG--------------QYSGMLDCARKILAREGMAAFYKGYVPNMLGIIP 348
[Close]
BLAST of EY659342 vs. ExPASy Swiss-Prot
Match: ADT4_BOVIN (ADP/ATP translocase 4 OS=Bos taurus GN=SLC25A31 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.526e-11
Identity = 46/169 (27.22%), Postives = 80/169 (47.34%), Query Frame = 3 
Query:  261 PFERTKILLQTRTEG------FQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWI---INNYPSMGSGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGXSLRSGIRSICAQPAYSGVKDVLTSVY*EGGIRALYSSIRSTLAGIL 740
            P ER K+LLQ +          Q +G+   L ++ +++G L +++GN A+V+R  P  AL+F   ++Y+      +N         + +L +G  AG T++   YPLD ART+L       G  +  G      +  + G+ D +  +    GI  LY     ++ GI+
Sbjct:   44 PIERVKLLLQVQASSKQISPEAQYKGIVDCLVRIPREQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQLFMSGVNKEKQFWRWFLANLASGGAAGATSLCVVYPLDFARTRL-------GADIGKGPE----ERQFKGLGDCIMKIAKSDGIVGLYQGFGVSVQGII 201
The following BLAST results are available for this feature:
BLAST of EY659342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
SCMC2_BOVIN9.526e-1126.71Calcium-binding mitochondrial carrier protein SCaM... [more]
ADT4_BOVIN9.526e-1127.22ADP/ATP translocase 4 OS=Bos taurus GN=SLC25A31 PE... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-B03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659342 ID=EY659342; Name=EY659342; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGGTGGGTGATAAAAATTTAAATAATTTGTCCAATTCACAG
AGGGTAAAGGTTACGTTTTAATTGGTTGAATTGGTTTGAGTCGGATTCAT
GGGTTCTCAGCAAGGCTCTACATTGTCAACGAATGTGGCTGGACTAGTTG
ATGGCTCGTCAGCTTGTAGAGAGGTTTCCTATGATGATAGTTTGCCTGTG
TATGTTAAGGAGCTAATTGCTGGAGGTGCTGCAGGGGCATTTGCTAAGAC
GGCTGTTGCACCTTTTGAACGGACTAAAATACTCTTGCAGACTAGAACTG
AAGGGTTCCAGTCTCGTGGAGTGTATCAATCCTTGAAGAAGTTATTGAAG
CAAGAGGGCATTCTTGGATTTTATAAGGGAAATGGAGCTAGTGTTCTTCG
GATTGTTCCTTATGCAGCCTTACATTTCATGACATATGAGGAGTATCGTG
TTTGGATCATAAATAACTATCCGTCCATGGGATCAGGTCCTGTTATAGAT
CTATTAGCTGGTTCGCTAGCTGGAGGAACAGCAGTTTTATGCACGTATCC
TTTAGATCTGGCTCGTACAAAACTTGCTTATCAGGTCGTGGACACAGGAN
GAAGTTTGAGGAGTGGTATTAGAAGTATATGTGCTCAGCCTGCATATAGT
GGCGTAAAAGATGTACTTACAAGCGTCTATTAGGAAGGGGGGATACGTGC
TCTATATTCGAGCATAAGGTCAACATTAGCTGGAATCCTCCCTATGCTGG
CCTGAAGTCCATATATATGAGGAACTAAAAGGCATGTCCCTGAGGAACAC
CAAAATCCATTGTGATGCCCCCTTCCTGGGGACCTTTGGCTGGGTATTCC
GGCAAACATTCCATACCCTTTAAAGTTGTAGGAAAAAAT
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