EY659328

Overview
NameEY659328
Unique NameEY659328
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659328_ssr783 microsatellite EY659328_ssr783:783..794. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13796 contig Csv1_Contig13796:540..1419. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659328 vs. ExPASy Swiss-Prot
Match: PER1_WHEAT (Peroxidase OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.517e-13
Identity = 48/162 (29.63%), Postives = 74/162 (45.68%), Query Frame = 2
Query:   14 LPNHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 499
            LP  + S S +   F    ++   +VAL G+H++G+  C     R+Y   D  +N      +   CP +  +         D  TP   DN YY N+L  KGL+  D  L  ++ T   V+  A +   F   F+ A+  +    PLTGT+G+IR  C+  N
Sbjct:  154 LPGPSSSRSQLEAAFLKKNLNTVDMVALSGAHTIGKAQCSNFRTRIYGG-DTNINTAFATSLKANCPQSGGNTNLANL---DTMTPNAFDNAYYTNLLSQKGLLHSDQVLFNNETTDNTVRNFASNAAAFSSAFTTAMIKMGNIAPLTGTQGQIRLSCSKVN 311          
BLAST of EY659328 vs. ExPASy Swiss-Prot
Match: PER66_MAIZE (Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.900e-13
Identity = 45/158 (28.48%), Postives = 72/158 (45.57%), Query Frame = 2
Query:   14 LPNHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVC 487
            LP    S+  +L  +    ++   +VAL G+H++G+  C      +Y + +  +N      +   CP A     +      D  TP   DN YY N+L  KGL+  D +L     T   V+  A S   F   F+ A+  +   +P TGT+G+IR+ C
Sbjct:  164 LPPPTSSLGQLLSAYNKKNLNPTDMVALSGAHTIGQAQCSSFNDHIYNDTN--INSAFAASLRANCPRA----GSTALAPLDTTTPNAFDNAYYTNLLSQKGLLHSDQELFNSGSTDSTVRSFASSTSAFNSAFATAMVKMGNLSPQTGTQGQIRRSC 315          
BLAST of EY659328 vs. ExPASy Swiss-Prot
Match: PER43_ARATH (Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 5.900e-13
Identity = 51/176 (28.98%), Postives = 83/176 (47.16%), Query Frame = 2
Query:    2 LEQYLPNHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFF-----KEFSRAITLLSENNPLTGTKGEIRKVCNLAN 499
            L + +P  +DS+ ++  +F   G++A  LV L  +H++G T C  +  RLY      + DP +NP  +P +  +CP    +      +  DR +  + D    +NI D   ++  D  L  D  TR  V       + FF      +F +AI  + +    TG KGEIR+VC+  N
Sbjct:  154 LAKDMPEVSDSIEILKAKFMQKGLNAKDLVLLSAAHTIGTTACFFMSKRLYDFLPGGQPDPTINPTFLPELTTQCPQ---NGDINVRLPIDRFSERLFDKQILQNIKDGFAVLQTDAGLYEDVTTRQVVDSYLGMLNPFFGPTFESDFVKAIVKMGKIGVKTGFKGEIRRVCSAFN 326          
BLAST of EY659328 vs. ExPASy Swiss-Prot
Match: PER1_MAIZE (Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.900e-13
Identity = 47/170 (27.65%), Postives = 76/170 (44.71%), Query Frame = 2
Query:   14 LPNHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPE--------VDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 499
            LP    +   + + F A  +    +V L G+H+VGR+ C     R++          VD  L+P +   +   CP        +     D GTP VLDNNYY+ +    GL   D+QL  + +    V   A ++  + ++F+ A+  +      TGT GE+R  C + N
Sbjct:  171 LPPPTSTAQSLTDLFKAKELSVEDMVVLSGAHTVGRSFCASFFKRVWNTSTNPATAIVDAGLSPSYAQLLRALCPSNTTQTTPITTAM-DPGTPNVLDNNYYKLLPRGMGLFFSDNQLRVNPQMAALVSSFASNETLWKEKFAAAMVKMGRIQVQTGTCGEVRLNCGVVN 339          
BLAST of EY659328 vs. ExPASy Swiss-Prot
Match: PER1_ARAHY (Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 5.900e-13
Identity = 48/162 (29.63%), Postives = 74/162 (45.68%), Query Frame = 2
Query:   14 LPNHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 499
            LP    ++S ++  F+  G     LV L G+H++G+  C     R+Y E +  ++P +   +   CP    D     +   D  TP   DN YY N+ + KGL+  D QL     T   V   + +   F  +F  A+  +   +PLTGT G+IR  C   N
Sbjct:  160 LPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAFRTRIYNESN--IDPTYAKSLQANCPSVGGDTNLSPF---DVTTPNKFDNAYYINLRNKKGLLHSDQQLFNGVSTDSQVTAYSNNAATFNTDFGNAMIKMGNLSPLTGTSGQIRTNCRKTN 316          
BLAST of EY659328 vs. ExPASy Swiss-Prot
Match: PER67_ARATH (Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.705e-13
Identity = 45/162 (27.78%), Postives = 82/162 (50.62%), Query Frame = 2
Query:   14 LPNHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 499
            +P    ++S ++ RF A G+    +VAL G+H++GR  CV   +R+Y   +  ++          CP A       +    D  +P   D+ +Y+ +L  KGL+  D  L  +  T   V   + + + F+++F+RA+  + + +PLTG+ G+IR+ C   N
Sbjct:  158 IPPPITTLSNLINRFKAQGLSTRDMVALSGAHTIGRAQCVTFRNRIYNASN--IDTSFAISKRRNCP-ATSGSGDNKKANLDVRSPDRFDHGFYKQLLSKKGLLTSDQVLFNNGPTDSLVIAYSHNLNAFYRDFARAMIKMGDISPLTGSNGQIRQNCRRPN 316          
BLAST of EY659328 vs. ExPASy Swiss-Prot
Match: PER44_ARATH (Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.314e-12
Identity = 52/163 (31.90%), Postives = 73/163 (44.79%), Query Frame = 2
Query:   14 LPNHNDSMSVVLERFAAIGIDAPGLVALLGS-HSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 499
            LP     +S  ++ FAA G++   +V L+G  HSVG  HC     RL    D A+ P     +  KC     DP        D+ T   +DN  Y  I   +G++ +D  L  D+ T   V   A S   F K F+ A+  +     LTG  GEIR+ C + N
Sbjct:  155 LPGPTIPVSASIQLFAAQGMNTNDMVTLIGGGHSVGVAHCSLFQDRLS---DRAMEPSLKSSLRRKCSSP-NDPTTFL----DQKTSFTVDNAIYGEIRRQRGILRIDQNLGLDRSTSGIVSGYASSNTLFRKRFAEALVKMGTIKVLTGRSGEIRRNCRVFN 309          
BLAST of EY659328 vs. ExPASy Swiss-Prot
Match: PER70_MAIZE (Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.717e-12
Identity = 47/162 (29.01%), Postives = 75/162 (46.30%), Query Frame = 2
Query:   14 LPNHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 499
            LP  +  ++ +   FA   +    LVAL G+H++G   C      +Y + +  +N          CP A  +         D  TP   DN YY N+L  +GL+  D QL     T   V+  A +   F ++F+ A+  +   +PLTGT+G+IR+ C+  N
Sbjct:  163 LPAPSLDLANLTAAFAKKRLSRTDLVALSGAHTIGLAQCKNFRAHIYNDTN--VNAAFATLRRANCPAAAGNGDG-NLAPLDTATPTAFDNAYYTNLLAQRGLLHSDQQLFNGGATDGLVRTYASTPRRFSRDFAAAMIRMGNISPLTGTQGQIRRACSRVN 321          
BLAST of EY659328 vs. ExPASy Swiss-Prot
Match: PER2_MAIZE (Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.928e-12
Identity = 51/168 (30.36%), Postives = 79/168 (47.02%), Query Frame = 2
Query:    8 QYLPNHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVH-RLYPEVDPALNPDHVPHMLHKCPD---AIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 499
            ++L     ++S +   FA  G+    LV L G+H+VGR+HC   V  RL  +V   +NP     +  +CP       DP  +Q    D  TP  +D  YY+N+L +  L   D  L T   T   V   AK   ++  +F +A+  ++     TG +G++RK C   N
Sbjct:  172 KFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVGRSHCSSFVSDRL--DVPSDINPALAAFLRTRCPPNTTTSDDPTVMQ----DVVTPNAMDIQYYKNVLSHTVLFTSDAALLTSPETAKLVLDNAKIPGWWEDKFEKAMVKMASLEVKTGHQGQVRKNCRAIN 333          
BLAST of EY659328 vs. ExPASy Swiss-Prot
Match: PER59_ARATH (Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.824e-12
Identity = 48/175 (27.43%), Postives = 83/175 (47.43%), Query Frame = 2
Query:   14 LPNHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCP----DAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATD----KRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 499
            LP+  + +  ++ +F A+ ++   +VAL G+H+ G+  C    +RL+        D  L    + ++   CP      I  P        DR T    DNNY++N+L+ KGL+  D  L +       T+  V+  ++SQ  FF++F+ A  ++   N   G  GE+R  C + N
Sbjct:  162 LPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKCAVFSNRLFNFTGLGNPDATLETSLLSNLQTVCPLGGNSNITAPL-------DRSTTDTFDNNYFKNLLEGKGLLSSDQILFSSDLAVNTTKKLVEAYSRSQSLFFRDFTCA--MIRMGNISNGASGEVRTNCRVIN 327          
The following BLAST results are available for this feature:
BLAST of EY659328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
PER1_WHEAT4.517e-1329.63Peroxidase OS=Triticum aestivum PE=2 SV=1[more]
PER66_MAIZE5.900e-1328.48Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1[more]
PER43_ARATH5.900e-1328.98Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=... [more]
PER1_MAIZE5.900e-1327.65Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1[more]
PER1_ARAHY5.900e-1329.63Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 ... [more]
PER67_ARATH7.705e-1327.78Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=... [more]
PER44_ARATH1.314e-1231.90Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=... [more]
PER70_MAIZE1.717e-1229.01Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1[more]
PER2_MAIZE2.928e-1230.36Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1[more]
PER59_ARATH3.824e-1227.43Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-H10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659328 ID=EY659328; Name=EY659328; organism=Citrus sinensis; type=EST; length=881bp
ACTTGAGCAGTATCTCCCAAATCACAATGACAGCATGTCTGTTGTTCTTG
AGAGGTTTGCAGCCATTGGCATTGACGCCCCTGGACTTGTTGCTCTGCTA
GGATCTCACAGTGTTGGCAGAACTCATTGTGTGAAGCTGGTGCACCGTCT
GTACCCAGAAGTTGACCCTGCACTGAACCCTGACCATGTTCCGCATATGC
TCCATAAGTGTCCTGATGCAATCCCAGACCCCAAGGCTGTTCAGTATGTG
AGGAATGACCGTGGCACACCCATGGTGCTGGACAACAACTACTATAGGAA
CATATTGGACAACAAGGGCTTGATGATGGTTGATCATCAGCTAGCCACCG
ACAAGAGGACAAGACCTTATGTTAAGAAGATGGCCAAGAGTCAAGACTAC
TTCTTCAAGGAATTTTCAAGAGCCATTACTCTCCTTTCTGAGAACAACCC
TCTCACAGGTACAAAGGGTGAGATCCGAAAGGTTTGCAATCTTGCCAACA
AGCTCCACGACAAGTCCTAGCTAGCTAACAGCTGTATTAGCTACAACAAG
TTAATAGCTCCAAATTTTTCTTCCTTGTTTCTTCTATGAGGAAGAAAAGA
GTGTGAGATGAGCTCCCAATAAGATGGTTTTTCTAGATCGGTTTGTTTCC
TGTGAGATGTTCGTATTACTGCTATTATGTTCCTTAGATGTACCGTCCAA
TGTTTAAGCCTAGGCTTTCCTTTTCCTCGATGGTGTGAGCTTGATGTTAT
TAATATTCANTAATGGCAGTGGTAAATGAGGGATGTATGTATGTATGCAG
GGATGGTGTATGGGGCATGGATTTTGATATGATGATNATNGATGATNCAT
GCCAAAAAAAAAAAAAAAAAAAAAGGGCNGN
back to top