EY659328

Overview
NameEY659328
Unique NameEY659328
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659328_ssr783 microsatellite EY659328_ssr783:783..794. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig13796 contig Csv1_Contig13796:540..1419. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659328 vs. ExPASy Swiss-Prot
Match: PER39_ARATH (Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.824e-12
Identity = 48/168 (28.57%), Postives = 81/168 (48.21%), Query Frame = 2
Query:   14 LPNHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMA-KSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 499
            +P    + + ++  F   G+D   LV L G+H++G +HC    +RL+      + DP+L+ ++  ++  +   +I D      V  D G+    D +YYR +L  +GL   D  L  +      VK+ A  S+  FF EFS ++  +      TG+ GEIR+ C   N
Sbjct:  161 IPPPFGNFTTLITLFGNQGLDVKDLVLLSGAHTIGVSHCSSFSNRLFNFTGVGDQDPSLDSEYADNLKSRRCLSIAD--NTTKVEMDPGSRNTFDLSYYRLVLKRRGLFESDAALTMNPAALAQVKRFAGGSEQEFFAEFSNSMEKMGRIGVKTGSDGEIRRTCAFVN 326          
BLAST of EY659328 vs. ExPASy Swiss-Prot
Match: PER10_ARATH (Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.824e-12
Identity = 45/165 (27.27%), Postives = 79/165 (47.88%), Query Frame = 2
Query:   14 LPNHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIP--DPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVC 487
            LP+  +++  +  +F  +G+D   +V L G+H++G   C  + HRL+      + DP L       +L K  D  P  D    +    D  + +  DN YY N+++N GL+  D  L TD      VK  +++   F ++F+ ++  +     +TG+ G IR  C
Sbjct:  184 LPSPFEALENITAKFVTLGLDLKDVVVLSGAHTIGFAQCFVIKHRLFNFKGSGQPDPNLAASSA--LLSKLKDTCPNVDSSDSKLAALDAASSVKFDNAYYVNLMNNIGLLDSDQTLMTDPTAAALVKSYSENPYLFSRDFAVSMVKMGNIGVMTGSDGVIRGKC 346          
BLAST of EY659328 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.995e-12
Identity = 46/171 (26.90%), Postives = 84/171 (49.12%), Query Frame = 2
Query:   14 LPNHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATD----KRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 499
            LP+  + +  ++ +FAA+G++   +VAL G+H+ G+  C    +RL+        D  L    +  +   CP      K       DR +    DNNY++N+L+ KGL+  D  L +       T+  V+  ++SQ  FF++F+   +++   + + G  GE+R  C + N
Sbjct:  162 LPSPFEPLDAIIAKFAAVGLNVTDVVALSGAHTFGQAKCDLFSNRLFNFTGAGTPDSTLETTLLSDLQTVCPIGGNGNKTAPL---DRNSTDAFDNNYFKNLLEGKGLLSSDQILFSSDLAVNTTKRLVEAYSRSQYLFFRDFT--CSMIRMGSLVNGASGEVRTNCRVIN 327          
BLAST of EY659328 vs. ExPASy Swiss-Prot
Match: PER8_ARATH (Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.113e-11
Identity = 48/158 (30.38%), Postives = 73/158 (46.20%), Query Frame = 2
Query:   32 SMSVVLERFAAIGIDAPGLVALLGS-HSVGRTHCVKLVHRLY-PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 499
            S++  ++ F +IG +   +VAL+G  H+VG  HC     R+  P++D  L        L K      DP        D+ TP  +DN  YR ++  + ++ +D  L  D  TR  V   A +   F + F+ A+  + E   LTG  GEIR  C   N
Sbjct:  161 SVATSIKAFKSIGFNVSTMVALIGGGHTVGVAHCSLFQDRIKDPKMDSKLRAK-----LKKSCRGPNDPSVFM----DQNTPFRVDNEIYRQMIQQRAILRIDDNLIRDGSTRSIVSDFAYNNKLFKESFAEAMQKMGEIGVLTGDSGEIRTNCRAFN 309          
BLAST of EY659328 vs. ExPASy Swiss-Prot
Match: PER11_ARATH (Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.113e-11
Identity = 46/171 (26.90%), Postives = 85/171 (49.71%), Query Frame = 2
Query:   14 LPNHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP--EVDPALNP---DHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDK---RTRPYVKKMAKSQDYFFKEFSRAITLLSE-NNPLTGTKGEIRKVCNLAN 499
            LP   + +  ++ +F + G+    +VAL+G+H++G+  C     R+Y   +V  ALNP    ++  +   CP +  +  +      D  TP + DN+ Y  +L  +GL+  D ++ T     +TR  V K A+    FF++FS+++  +    N  +   GE+R+ C   N
Sbjct:  166 LPTPEEGLISIIAKFYSQGLSVEDMVALIGAHTIGKAQCRNFRSRIYGDFQVTSALNPVSETYLASLREICPASSGEGDS-NVTAIDNVTPNLFDNSIYHTLLRGEGLLNSDQEMYTSLFGIQTRRIVSKYAEDPVAFFEQFSKSMVKMGNILNSESLADGEVRRNCRFVN 335          
BLAST of EY659328 vs. ExPASy Swiss-Prot
Match: PER68_ARATH (Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.898e-11
Identity = 43/162 (26.54%), Postives = 78/162 (48.15%), Query Frame = 2
Query:   14 LPNHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 499
            LP    ++  ++  F A G+    +VAL G+H++G+  CV    R+Y   +  L+          CP A         + + R TP   D +Y+  +++++GL+  D  L     T   V   ++S   F+++F  A+  + + +PLTG+ G+IR+ C   N
Sbjct:  167 LPPPTSTLDNLINLFRANGLSPRDMVALSGAHTIGQARCVTFRSRIYNSTNIDLS--FALSRRRSCPAATGSGDNNAAILDLR-TPEKFDGSYFMQLVNHRGLLTSDQVLFNGGSTDSIVVSYSRSVQAFYRDFVAAMIKMGDISPLTGSNGQIRRSCRRPN 325          
BLAST of EY659328 vs. ExPASy Swiss-Prot
Match: PERA_IPOBA (Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.479e-11
Identity = 45/158 (28.48%), Postives = 76/158 (48.10%), Query Frame = 2
Query:   26 NDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 499
            N++++  L +FAA G +   +VALLGSH++G   C  L       +   +NP  V  +   C   +    A   V  D  TP   D  Y+ ++++++GL+  D++L     T   V++   +   F  +F+ A+  +S   P  G   EIR VC+  N
Sbjct:  200 NENLTSQLTKFAAKGFNGTEMVALLGSHTIGFARCPLLC------ISTFINPARVSTLNCNCSGTV---NATGLVGLDP-TPTTWDQRYFSDVVNDQGLLFSDNELLKGNTTNAAVRRYRDAMGAFLTDFAAAMVKMSNLPPSPGVALEIRDVCSRVN 347          
BLAST of EY659328 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.479e-11
Identity = 46/163 (28.22%), Postives = 72/163 (44.17%), Query Frame = 2
Query:   14 LPNHNDSMSVVLERFAAIG-IDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 499
            LP  N S + +   F   G ++   +VAL G+H++G+  C     R+Y   D  +N  +   +   CP  +           D  T    DN YY N++  KGL+  D  L  +  T   V+  A +   F   F+ A+  +    P TGT+G+IR  C+  N
Sbjct:  154 LPGFNSSRAELEAAFLKKGGLNTVDMVALSGAHTIGQAQCSTFRARIYGG-DTNINAAYAASLRANCPQTVGSGDG-SLANLDTTTANTFDNAYYTNLMSQKGLLHSDQVLFNNDTTDNTVRNFASNPAAFSSSFTTAMIKMGNIAPKTGTQGQIRLSCSRVN 314          
BLAST of EY659328 vs. ExPASy Swiss-Prot
Match: PER64_ARATH (Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.237e-11
Identity = 49/163 (30.06%), Postives = 72/163 (44.17%), Query Frame = 2
Query:   14 LPNHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVC 487
            LP    ++S + + F   G+    LVAL G H++G  HC    +RL+      EVDP LNP     +   CP       A     N  GT    DN YY+ ++  K L   D  L     T+  V K A S + F + F +++  +S    ++G   E+R  C
Sbjct:  157 LPAPTFNISQLRQNFGQRGLSMHDLVALSGGHTLGFAHCSSFQNRLHKFNTQKEVDPTLNPSFAARLEGVCPAHNTVKNAGS---NMDGTVTSFDNIYYKMLIQGKSLFSSDESLLAVPSTKKLVAKYANSNEEFERAFVKSMIKMSS---ISGNGNEVRLNC 313          
BLAST of EY659328 vs. ExPASy Swiss-Prot
Match: PER13_ARATH (Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.228e-11
Identity = 45/167 (26.95%), Postives = 82/167 (49.10%), Query Frame = 2
Query:   14 LPNHNDSMSVVLERFAAIGIDAPGLVAL-LGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRP----YVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 499
            LP+  DS++ +  +F   G+    LV L  G+H++G T C  ++ RL  + DP +NP+    +  KCP        +     D  +  V DN  ++NI + +G+++ D  L  D   +     Y++    S+  F  +F++A+  +       G +GEIR++C+  N
Sbjct:  157 LPDVQDSINTLKSKFREKGLSDQDLVLLSAGAHTIGTTACFFVIPRLDAQ-DPTINPEFFQILRSKCPQGGDVNVRIPL---DWDSQFVFDNQIFQNIKNGRGVILSDSVLYQDNNMKKIIDSYLETNQSSKANFAADFTKAMIKMGAIGVKIGAEGEIRRLCSATN 319          
The following BLAST results are available for this feature:
BLAST of EY659328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
PER39_ARATH3.824e-1228.57Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=... [more]
PER10_ARATH3.824e-1227.27Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=... [more]
PERN_ARMRU4.995e-1226.90Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]
PER8_ARATH1.113e-1130.38Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 ... [more]
PER11_ARATH1.113e-1126.90Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=... [more]
PER68_ARATH1.898e-1126.54Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=... [more]
PERA_IPOBA2.479e-1128.48Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER1_HORVU2.479e-1128.22Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]
PER64_ARATH3.237e-1130.06Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=... [more]
PER13_ARATH4.228e-1126.95Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-H10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659328 ID=EY659328; Name=EY659328; organism=Citrus sinensis; type=EST; length=881bp
ACTTGAGCAGTATCTCCCAAATCACAATGACAGCATGTCTGTTGTTCTTG
AGAGGTTTGCAGCCATTGGCATTGACGCCCCTGGACTTGTTGCTCTGCTA
GGATCTCACAGTGTTGGCAGAACTCATTGTGTGAAGCTGGTGCACCGTCT
GTACCCAGAAGTTGACCCTGCACTGAACCCTGACCATGTTCCGCATATGC
TCCATAAGTGTCCTGATGCAATCCCAGACCCCAAGGCTGTTCAGTATGTG
AGGAATGACCGTGGCACACCCATGGTGCTGGACAACAACTACTATAGGAA
CATATTGGACAACAAGGGCTTGATGATGGTTGATCATCAGCTAGCCACCG
ACAAGAGGACAAGACCTTATGTTAAGAAGATGGCCAAGAGTCAAGACTAC
TTCTTCAAGGAATTTTCAAGAGCCATTACTCTCCTTTCTGAGAACAACCC
TCTCACAGGTACAAAGGGTGAGATCCGAAAGGTTTGCAATCTTGCCAACA
AGCTCCACGACAAGTCCTAGCTAGCTAACAGCTGTATTAGCTACAACAAG
TTAATAGCTCCAAATTTTTCTTCCTTGTTTCTTCTATGAGGAAGAAAAGA
GTGTGAGATGAGCTCCCAATAAGATGGTTTTTCTAGATCGGTTTGTTTCC
TGTGAGATGTTCGTATTACTGCTATTATGTTCCTTAGATGTACCGTCCAA
TGTTTAAGCCTAGGCTTTCCTTTTCCTCGATGGTGTGAGCTTGATGTTAT
TAATATTCANTAATGGCAGTGGTAAATGAGGGATGTATGTATGTATGCAG
GGATGGTGTATGGGGCATGGATTTTGATATGATGATNATNGATGATNCAT
GCCAAAAAAAAAAAAAAAAAAAAAGGGCNGN
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