EY659327 | Citrus Genome Database

Overview


Name	EY659327
Unique Name	EY659327
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	879

Libraries


Library Name	Type
Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig5473	contig	Csv1_Contig5473:109..989.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of EY659327 vs. ExPASy Swiss-Prot
Match: 14337_SOLLC (14-3-3 protein 7 OS=Solanum lycopersicum GN=TFT7 PE=2 SV=2)

HSP 1 Score: 290.041 bits (741), Expect = 1.167e-77
Identity = 148/226 (65.49%), Postives = 179/226 (79.20%), Query Frame = 1

Query:   76 REENVYMAKLAEQAERYEEMVEFMXXXXXXXXXXXXXXXXXRNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPSASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDPLGXGVLQDSTLIMQLLRD 753
            RE+ VY+A+LAEQAERY+EMVE M                 RNL+SV YKNVIGARRASWRI+SSIEQKEES+G+E +V  I+ YR ++E EL+ IC  IL ++D  L+PS+++G+S VFY KMKGDY+RYLAEFK G +RKEA+E +L AY+AA   A+++LAPTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELD L     +DSTLIMQLLRD
Sbjct:    5 REKQVYLARLAEQAERYDEMVEAMKAIAKMDVELTVEE---RNLVSVGYKNVIGARRASWRILSSIEQKEESKGHEQNVKRIKTYRQRVEDELTKICSDILSVIDEHLVPSSTTGESTVFYYKMKGDYYRYLAEFKAGDDRKEASEQSLKAYEAATATASSDLAPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKDSTLIMQLLRD 227

[Close]

BLAST of EY659327 vs. ExPASy Swiss-Prot
Match: 14312_ARATH (14-3-3-like protein GF14 iota OS=Arabidopsis thaliana GN=GRF12 PE=2 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 2.600e-77
Identity = 152/226 (67.26%), Postives = 174/226 (76.99%), Query Frame = 1

Query:   76 REENVYMAKLAEQAERYEEMVEFMXXXXXXXXXXXXXXXXXRNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPSASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDPLGXGVLQDSTLIMQLLRD 753
            RE  VYMAKL+EQAERY+EMVE M                 RNLLSV YKNVIGARRASWRI+SSIEQKEES+GNE +V  I+ YR K+E EL++IC  IL ++D  LIP A+SG++ VFY KMKGDY+RYLAEFKT  ERKEAAE +L  Y+AA   A+ EL  THPIRLGLALNFSVFYYEI+NSP+RAC+LAKQAFDEAIAELD L     +DSTLIMQLLRD
Sbjct:   10 RETFVYMAKLSEQAERYDEMVETMKKVARVNSELTVEE---RNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNESNVKQIKGYRQKVEDELANICQDILTIIDQHLIPHATSGEATVFYYKMKGDYYRYLAEFKTEQERKEAAEQSLKGYEAATQAASTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRD 232

[Close]

BLAST of EY659327 vs. ExPASy Swiss-Prot
Match: RAD25_SCHPO (DNA damage checkpoint protein rad25 OS=Schizosaccharomyces pombe GN=rad25 PE=1 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 5.791e-77
Identity = 153/226 (67.70%), Postives = 175/226 (77.43%), Query Frame = 1

Query:   76 REENVYMAKLAEQAERYEEMVEFMXXXXXXXXXXXXXXXXXRNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPSASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDPLGXGVLQDSTLIMQLLRD 753
            RE +VY+AKLAEQAERYEEMVE M                 RNLLSVAYKN+IGARRASWRIISSIEQKEESRGN    + I++YR KIE ELS IC  +L +L+  LIP+A++G+SKVFY KMKGDY+RYLAEF  G   KEAA+S+L AYKAA DIA AEL PT P+RLGLALNFSVFYYEIL+SP+ AC+LAKQ FDEAI+ELD L     +DSTLIMQLLRD
Sbjct:    5 RENSVYLAKLAEQAERYEEMVENMKKVACSNDKLSVEE---RNLLSVAYKNIIGARRASWRIISSIEQKEESRGNTRQAALIKEYRKKIEDELSDICHDVLSVLEKHLIPAATTGESKVFYYKMKGDYYRYLAEFTVGEVCKEAADSSLEAYKAASDIAVAELPPTDPMRLGLALNFSVFYYEILDSPESACHLAKQVFDEAISELDSLSEESYKDSTLIMQLLRD 227

[Close]

BLAST of EY659327 vs. ExPASy Swiss-Prot
Match: 1433C_SOYBN (14-3-3-like protein C OS=Glycine max GN=GF14C PE=2 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 7.564e-77
Identity = 150/226 (66.37%), Postives = 177/226 (78.32%), Query Frame = 1

Query:   76 REENVYMAKLAEQAERYEEMVEFMXXXXXXXXXXXXXXXXXRNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPSASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDPLGXGVLQDSTLIMQLLRD 753
            RE  VY+AKLAEQAERYEEMVE M                 RNLLSV YKNV+GARRASWRI+SSIEQKEE++GN+  V  I++YR K+E+ELS+IC  I+ ++D  LIPS+SSG+  VF+ KMKGDY+RYLAEFK+G ERKEAA+ ++ AY+ A   A AELA THPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAI+ELD L     +DSTLIMQLLRD
Sbjct:    7 RENFVYVAKLAEQAERYEEMVEAMKNVANLNVELTVEE---RNLLSVGYKNVVGARRASWRILSSIEQKEEAKGNDVSVKRIKEYRLKVESELSNICSDIMTVIDEYLIPSSSSGEPSVFFYKMKGDYYRYLAEFKSGDERKEAADHSMKAYQLASTTAEAELASTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRD 229

[Close]

BLAST of EY659327 vs. ExPASy Swiss-Prot
Match: 14311_ARATH (14-3-3-like protein GF14 omicron OS=Arabidopsis thaliana GN=GRF11 PE=2 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 9.879e-77
Identity = 150/226 (66.37%), Postives = 176/226 (77.88%), Query Frame = 1

Query:   76 REENVYMAKLAEQAERYEEMVEFMXXXXXXXXXXXXXXXXXRNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPSASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDPLGXGVLQDSTLIMQLLRD 753
            R + VY+AKL EQAERY+EMVE M                 RNLLSV YKNVIGARRASWRI+SSIEQKEES+GNE +   I+DYR+K+E ELS IC  IL ++D  L+P A+SG+S VFY KMKGDY RYLAEFK+GA+R+EAA+ +L AY+AA   A+ EL+ THPIRLGLALNFSVFYYEILNSP+RAC+LAK+AFDEAIAELD L     +DSTLIMQLLRD
Sbjct:    5 RAKQVYLAKLNEQAERYDEMVEAMKKVAALDVELTIEE---RNLLSVGYKNVIGARRASWRILSSIEQKEESKGNEQNAKRIKDYRTKVEEELSKICYDILAVIDKHLVPFATSGESTVFYYKMKGDYFRYLAEFKSGADREEAADLSLKAYEAATSSASTELSTTHPIRLGLALNFSVFYYEILNSPERACHLAKRAFDEAIAELDSLNEDSYKDSTLIMQLLRD 227

[Close]

BLAST of EY659327 vs. ExPASy Swiss-Prot
Match: 14310_ARATH (14-3-3-like protein GF14 epsilon OS=Arabidopsis thaliana GN=GRF10 PE=2 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 5.421e-75
Identity = 143/226 (63.27%), Postives = 176/226 (77.88%), Query Frame = 1

Query:   76 REENVYMAKLAEQAERYEEMVEFMXXXXXXXXXXXXXXXXXRNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPSASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDPLGXGVLQDSTLIMQLLRD 753
            RE+ VY+AKL+EQ ERY+EMVE M                 RNL+SV YKNVIGARRASWRI+SSIEQKEES+GN+++V  +++YR ++E EL+ +C+ IL ++D  LIPS+++ +S VF+ KMKGDY+RYLAEF +GAERKEAA+ +L AYKAA   A   LAPTHP+RLGLALNFSVFYYEILNSP+ AC LAKQAFD+AIAELD L     +DSTLIMQLLRD
Sbjct:    5 REKQVYLAKLSEQTERYDEMVEAMKKVAQLDVELTVEE---RNLVSVGYKNVIGARRASWRILSSIEQKEESKGNDENVKRLKNYRKRVEDELAKVCNDILSVIDKHLIPSSNAVESTVFFYKMKGDYYRYLAEFSSGAERKEAADQSLEAYKAAVAAAENGLAPTHPVRLGLALNFSVFYYEILNSPESACQLAKQAFDDAIAELDSLNEESYKDSTLIMQLLRD 227

[Close]

BLAST of EY659327 vs. ExPASy Swiss-Prot
Match: 14339_ARATH (14-3-3-like protein GF14 mu OS=Arabidopsis thaliana GN=GRF9 PE=1 SV=2)

HSP 1 Score: 278.1 bits (710), Expect = 4.589e-74
Identity = 146/226 (64.60%), Postives = 173/226 (76.55%), Query Frame = 1

Query:   76 REENVYMAKLAEQAERYEEMVEFMXXXXXXXXXXXXXXXXXRNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPSASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDPLGXGVLQDSTLIMQLLRD 753
            R+  VY+AKL+EQAERYEEMVE M                 RNLLSV YKNVIG+RRASWRI SSIEQKE  +GN+ +V  I++Y  K+E ELS+IC  I+ +LD  LIPSAS G+S VF+ KMKGDY+RYLAEFK+G ERKEAA+ +L AY+ A   A A+L PTHPIRLGLALNFSVFYYEI+N+P+RAC+LAKQAFDEAI+ELD L     +DSTLIMQLLRD
Sbjct:    7 RDTFVYLAKLSEQAERYEEMVESMKSVAKLNVDLTVEE---RNLLSVGYKNVIGSRRASWRIFSSIEQKEAVKGNDVNVKRIKEYMEKVELELSNICIDIMSVLDEHLIPSASEGESTVFFNKMKGDYYRYLAEFKSGNERKEAADQSLKAYEIATTAAEAKLPPTHPIRLGLALNFSVFYYEIMNAPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRD 229

[Close]

BLAST of EY659327 vs. ExPASy Swiss-Prot
Match: 1433_TOBAC (14-3-3-like protein OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 2.277e-73
Identity = 144/226 (63.72%), Postives = 177/226 (78.32%), Query Frame = 1

Query:   76 REENVYMAKLAEQAERYEEMVEFMXXXXXXXXXXXXXXXXXRNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPSASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDPLGXGVLQDSTLIMQLLRD 753
            RE+ VY+A+LAEQAERY+EMVE M                 RNL+SV YKNVIGARRASWRI+SSIEQKEES+G++ +V  I+ Y+ ++E EL+      L ++D  ++PS++SG+S VFY KMKGDY+RYLAEFK+G +RKEAA+ +L AY+AA   A+A+LAPTHPIRLGLALNFSVFYYEILNSP+RAC+LAKQAFDEAIAELD L     +DSTLIMQLLRD
Sbjct:    5 REKQVYLARLAEQAERYDEMVEAMKTVAKMDVELTVEE---RNLVSVGYKNVIGARRASWRILSSIEQKEESKGHDQNVKRIKTYQQRVEDELTKYAL-TLSVIDEHVVPSSTSGESTVFYYKMKGDYYRYLAEFKSGDDRKEAADQSLKAYEAATATASADLAPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKDSTLIMQLLRD 226

[Close]

BLAST of EY659327 vs. ExPASy Swiss-Prot
Match: 14331_ENTHI (14-3-3 protein 1 OS=Entamoeba histolytica PE=3 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 2.277e-73
Identity = 139/226 (61.50%), Postives = 174/226 (76.99%), Query Frame = 1

Query:   76 REENVYMAKLAEQAERYEEMVEFMXXXXXXXXXXXXXXXXXRNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPSASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDPLGXGVLQDSTLIMQLLRD 753
            RE+ VY AKLAEQ+ERY+EMV+ M                 RNLLSVAYKNVIGA+RASWRIISS+EQKE+++GN+ HV  I+ YR+KIE ELS+ CD +LK++   L+P AS+ +SKVF+ KM+GDY+RY AEF    +RKE A+ +L AY  A +I+NAELAPTHPIRLGLALNFSVFY+EI+N  D+AC LAKQAFD+AIA+LD +   + +DSTLIMQLLRD
Sbjct:    4 REDCVYTAKLAEQSERYDEMVQCMKQVAEMEAELSIEE---RNLLSVAYKNVIGAKRASWRIISSLEQKEQAKGNDKHVEIIKGYRAKIEKELSTCCDDVLKVIQENLLPKASTSESKVFFKKMEGDYYRYFAEFTVDEKRKEVADKSLAAYTEATEISNAELAPTHPIRLGLALNFSVFYFEIMNDADKACQLAKQAFDDAIAKLDEVPENMYKDSTLIMQLLRD 226

[Close]

BLAST of EY659327 vs. ExPASy Swiss-Prot
Match: 14338_SOLLC (14-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 PE=2 SV=2)

HSP 1 Score: 274.248 bits (700), Expect = 6.626e-73
Identity = 139/226 (61.50%), Postives = 172/226 (76.11%), Query Frame = 1

Query:   76 REENVYMAKLAEQAERYEEMVEFMXXXXXXXXXXXXXXXXXRNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPSASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDPLGXGVLQDSTLIMQLLRD 753
            RE  VY+A+LAEQAERY+EMV+ M                 RNLLSV YKNV+G+RRASWRI+SSIEQKE++RGNE +V  I+ YR K+E+EL+ IC+ I+ ++D  LIPS ++G+S VFY KMKGDY+RYLAEFKTG ++KE ++ +L AY+ A   A AEL  THPIRLGLALNFSVFYYEI+NSP+RAC LAKQ FDEAI+ELD L     +D TLI+QLLRD
Sbjct:    7 RESLVYIARLAEQAERYDEMVDAMKNVANLDVELTVEE---RNLLSVGYKNVVGSRRASWRILSSIEQKEDARGNEQNVKRIQGYRQKVESELTDICNNIMTVIDEHLIPSCTAGESTVFYYKMKGDYYRYLAEFKTGDDKKEVSDLSLKAYQTATTTAEAELPITHPIRLGLALNFSVFYYEIMNSPERACQLAKQVFDEAISELDSLNEDNYKDGTLILQLLRD 229

The following BLAST results are available for this feature:

BLAST of EY659327 vs. ExPASy Swiss-Prot

BLAST of EY659327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144


Match Name	E-value	Identity	Description
14337_SOLLC	1.167e-77	65.49	14-3-3 protein 7 OS=Solanum lycopersicum GN=TFT7 P...	[more]
14312_ARATH	2.600e-77	67.26	14-3-3-like protein GF14 iota OS=Arabidopsis thali...	[more]
RAD25_SCHPO	5.791e-77	67.70	DNA damage checkpoint protein rad25 OS=Schizosacch...	[more]
1433C_SOYBN	7.564e-77	66.37	14-3-3-like protein C OS=Glycine max GN=GF14C PE=2...	[more]
14311_ARATH	9.879e-77	66.37	14-3-3-like protein GF14 omicron OS=Arabidopsis th...	[more]
14310_ARATH	5.421e-75	63.27	14-3-3-like protein GF14 epsilon OS=Arabidopsis th...	[more]
14339_ARATH	4.589e-74	64.60	14-3-3-like protein GF14 mu OS=Arabidopsis thalian...	[more]
1433_TOBAC	2.277e-73	63.72	14-3-3-like protein OS=Nicotiana tabacum PE=2 SV=1	[more]
14331_ENTHI	2.277e-73	61.50	14-3-3 protein 1 OS=Entamoeba histolytica PE=3 SV=...	[more]
14338_SOLLC	6.626e-73	61.50	14-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 P...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C1-101-008-H09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY659327 ID=EY659327; Name=EY659327; organism=Citrus sinensis; type=EST; length=879bp
CCACGCGTCCGCATCAACCAAAAAAAAAAAAAAAAAAGACAAATGGCCGC
CGCAGCCACACCCACGCCTTCGCCTCGCGAGGAGAACGTCTACATGGCGA
AGCTCGCTGAGCAAGCCGAGCGCTACGAGGAAATGGTCGAGTTCATGGAA
AAAGTCTCCGCCTCCGTCGAGAGCAGCGAGGAACTCACCGTTGAGGAACG
CAACCTCCTCTCCGTCGCTTACAAGAACGTCATCGGCGCCCGCCGTGCCA
GCTGGCGCATTATTTCCTCCATCGAACAGAAAGAGGAGAGCCGCGGCAAC
GAGGACCACGTCTCCACGATCCGAGATTACCGCTCCAAGATCGAGACCGA
GCTTTCCTCGATCTGCGACGGCATCTTGAAGCTTCTTGACTCCCGCCTCA
TTCCTTCCGCTTCTTCTGGTGACTCCAAGGTTTTCTATTTGAAGATGAAG
GGAGATTATCACAGGTACTTGGCTGAGTTCAAGACCGGAGCCGAGCGTAA
GGAAGCCGCCGAGAGCACCCTCACTGCTTATAAAGCCGCTCAGGATATTG
CAAATGCAGAATTGGCTCCGACTCATCCCATCCGTTTAGGACTGGCTCTG
AACTTCTCTGTGTTTTACTATGAGATCCTGAACTCTCCTGATCGTGCTTG
CAATTTGGCCAAGCAGGCTTTTGACGAGGCAATTGCTGAGTTGGATCCCC
TGGGTGANGGAGTCCTACAGGATAGCACTTTGATCATGCAACTTCTTCGT
GACACCTCACTCTGTGGACCTNCGACTGCANGATGATGGAGCAGACGAGA
TTAANGAGCGGNCAAGCTGAAGCGAACACAGTGAGAATCAGATGGGATNN
GACTTCTCACTGGTTTAAGGGGAGAGAGT