EY659316

Overview
NameEY659316
Unique NameEY659316
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length902
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659316 vs. ExPASy Swiss-Prot
Match: LRRC7_RAT (Leucine-rich repeat-containing protein 7 OS=Rattus norvegicus GN=Lrrc7 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.010e-13
Identity = 52/161 (32.30%), Postives = 87/161 (54.04%), Query Frame = 1
Query:  226 DTKVGDLPAHEVIYPTTHFMVPFLTTWGIYFMLITLDLSKNQLTGIIPTSLGNSRNLKRHTLGQNLLTGKIPPSLGHLTSLQALSLRHNLLAGEIPPSIGRLSSLEVLALRSNQLSGEIPRELGDLSQLRYISLPADGLSGTLPPKLGKLNNLQELWLTSN 708
            D  +    A E +  +++ +     + G+   L TL +  NQLT ++P ++GN   L+      N L   +PP++G+L SL+ L++  N L  E+P  IG   ++ V++LRSN+L   +P E+G + +LR ++L +D     LP    KL  L  LWL+ N
Sbjct:  251 DMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLT-MLPNTIGNLSLLEEFDCSCNELES-LPPTIGYLHSLRTLAVDENFLP-ELPREIGSCKNVTVMSLRSNKLE-FLPEEIGQMQRLRVLNL-SDNRLKNLPFSFTKLKELAALWLSDN 406          
BLAST of EY659316 vs. ExPASy Swiss-Prot
Match: LRRC7_MOUSE (Leucine-rich repeat-containing protein 7 OS=Mus musculus GN=Lrrc7 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 8.010e-13
Identity = 52/161 (32.30%), Postives = 87/161 (54.04%), Query Frame = 1
Query:  226 DTKVGDLPAHEVIYPTTHFMVPFLTTWGIYFMLITLDLSKNQLTGIIPTSLGNSRNLKRHTLGQNLLTGKIPPSLGHLTSLQALSLRHNLLAGEIPPSIGRLSSLEVLALRSNQLSGEIPRELGDLSQLRYISLPADGLSGTLPPKLGKLNNLQELWLTSN 708
            D  +    A E +  +++ +     + G+   L TL +  NQLT ++P ++GN   L+      N L   +PP++G+L SL+ L++  N L  E+P  IG   ++ V++LRSN+L   +P E+G + +LR ++L +D     LP    KL  L  LWL+ N
Sbjct:  246 DMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLT-MLPNTIGNLSLLEEFDCSCNELES-LPPTIGYLHSLRTLAVDENFLP-ELPREIGSCKNVTVMSLRSNKLE-FLPEEIGQMQRLRVLNL-SDNRLKNLPFSFTKLKELAALWLSDN 401          
BLAST of EY659316 vs. ExPASy Swiss-Prot
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana GN=SRF1 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.366e-12
Identity = 49/131 (37.40%), Postives = 67/131 (51.15%), Query Frame = 1
Query:  328 TLDLSKNQLTGIIPTSLGNSRNLKRHTLGQNLLTGKIPPSLGHLTSLQALSLRHNLLAGEIPPSIGRLSSLEVLALRSNQLSGEIPRELGDLSQLRYISLPADGLSGTLPPKLGKLNNLQELWLTSNNVMG 720
            T+ L    L G +   L    +LK      N + G IP +L    SLQ L L  N   G IP S+  L SL V++L +N LSG+IP    DL  +  I L ++ LSG LPP +  L+ L  L L +N++ G
Sbjct:   80 TIILISANLGGELGVGLNMFTSLKAMDFSNNHIGGSIPSTLP--VSLQNLFLSGNNFTGTIPESLSSLKSLSVMSLNNNLLSGKIPDVFQDLGLMINIDLSSNNLSGPLPPSMQNLSTLTSLLLQNNHLSG 208          

HSP 2 Score: 69.3218 bits (168), Expect = 3.365e-11
Identity = 47/120 (39.17%), Postives = 69/120 (57.50%), Query Frame = 1
Query:  322 LITLDLSKNQLTGIIPTSLGNSRNLKRHTLGQNLLTGKIPPSLGHLTSLQALSLRHNLLAGEIPPSIGRLSSLEVLALRSNQLSGEIPRELGDLSQLRYISLPADGLSGTLPPKLGKLNN 681
            L  L LS N  TG IP SL + ++L   +L  NLL+GKIP     L  +  + L  N L+G +PPS+  LS+L  L L++N LSGE+   L DL  L+ +++  +  +G +P KL  + N
Sbjct:  124 LQNLFLSGNNFTGTIPESLSSLKSLSVMSLNNNLLSGKIPDVFQDLGLMINIDLSSNNLSGPLPPSMQNLSTLTSLLLQNNHLSGELD-VLQDL-PLKDLNVENNLFNGPIPEKLLSIPN 241          

HSP 3 Score: 68.9366 bits (167), Expect = 4.395e-11
Identity = 51/135 (37.78%), Postives = 72/135 (53.33%), Query Frame = 1
Query:  310 IYFMLITLDLSKNQLTGIIPTSLGNSRNLKRHTLGQNLLTGKIPPSLGHLTSLQALSLRHNLLAGEIPPSIGRLSSLEVLALRSNQLSGEIPRELGDLSQLRYISLPADGLSGTLPPKLGKLNNLQELWLTSNNV 714
            ++  L  +D S N + G IP++L  S  L+   L  N  TG IP SL  L SL  +SL +NLL+G+IP     L  +  + L SN LSG +P  + +LS L  + L  + LS       G+L+ LQ+L L   NV
Sbjct:   98 MFTSLKAMDFSNNHIGGSIPSTLPVS--LQNLFLSGNNFTGTIPESLSSLKSLSVMSLNNNLLSGKIPDVFQDLGLMINIDLSSNNLSGPLPPSMQNLSTLTSLLLQNNHLS-------GELDVLQDLPLKDLNV 223          
BLAST of EY659316 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.784e-12
Identity = 53/156 (33.97%), Postives = 71/156 (45.51%), Query Frame = 1
Query:  280 FMVPFLTTWGIYFMLITLDLSKNQLTGIIPTSLGNSRNLKRHTLGQNLLTGKIP-------PSLGHLTSLQALSLRHNLLAGEIPPSI--GRLSSLEVLALRSNQLSGEIPRELGDLSQLRYISLPADGLSGTLPPKLGKLNNLQELWLTSNNVMG 720
            F  P   + G    L  L L+ N+ +G IP S+G    L    +  N L GK+P       P L  L         +N L+GEIP  +    ++ L VL    NQ +G IP  LG +  L  + L  + LSG +P  L  L NLQEL L+ N   G
Sbjct:  129 FNGPIPDSIGNLEQLTRLSLNLNKFSGTIPASMGRLSKLYWFDIADNQLEGKLPVSDGASLPGLDMLLQTGHFHFGNNKLSGEIPEKLFSSEMTLLHVL-FDGNQFTGSIPESLGLVQNLTVLRLDRNRLSGDIPSSLNNLTNLQELHLSDNKFTG 283          
BLAST of EY659316 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.331e-12
Identity = 47/136 (34.56%), Postives = 70/136 (51.47%), Query Frame = 1
Query:  316 FMLITLDLSKNQLTGIIPTSLGN-SRNLKRHTLGQNLLTGKIPPSLGHLTSLQALSLRHNLLAGEIPPSIGRLSSLEVLALRSNQLSGEIPRELGDLSQLRYISLPADGLSGTLPPKLGKLNNLQELWLTSNNVMG 720
            F L + ++S N  TG IP+ +   S  L +     N  +G +   L   + L  L    N L+GEIP  I  L  LE L L  N+LSG+I   +  L++L  + L ++ + G +P  +GKL+ L  L L  NN+MG
Sbjct:  198 FNLTSFNVSNNSFTGSIPSFMCTASPQLTKLDFSYNDFSGDLSQELSRCSRLSVLRAGFNNLSGEIPKEIYNLPELEQLFLPVNRLSGKIDNGITRLTKLTLLELYSNHIEGEIPKDIGKLSKLSSLQLHVNNLMG 333          

HSP 2 Score: 70.4774 bits (171), Expect = 1.511e-11
Identity = 48/128 (37.50%), Postives = 66/128 (51.56%), Query Frame = 1
Query:  346 NQLTGIIPTSLGNSRNLKRHTLGQNLLTGKIPPSLGHLTSLQALSLRHNLLAGEIPPSIGRLSSLEVLALRSNQLSGEIPRELGDLSQLRYISLPADGLSGTLPP-KLGKLNNLQELWLTSNNVMG*F 726
            N L+G IP  + N   L++  L  N L+GKI   +  LT L  L L  N + GEIP  IG+LS L  L L  N L G IP  L + ++L  ++L  + L GTL      +  +L  L L +N+  G F
Sbjct:  257 NNLSGEIPKEIYNLPELEQLFLPVNRLSGKIDNGITRLTKLTLLELYSNHIEGEIPKDIGKLSKLSSLQLHVNNLMGSIPVSLANCTKLVKLNLRVNQLGGTLSAIDFSRFQSLSILDLGNNSFTGEF 384          

HSP 3 Score: 68.1662 bits (165), Expect = 7.497e-11
Identity = 49/146 (33.56%), Postives = 74/146 (50.68%), Query Frame = 1
Query:  331 LDLSKNQLTGIIPTSLGNSRNLKRHTLGQNLLTGKIPPSLGHLTSLQAL----SLRHNLLAGEIPPSIG-----------RLSSLE-VLALRSNQLSGEIPRELGDLSQLRYISLPADGLSGTLPPKLGKLNNLQELWLTSNNVMG 720
            +DLS N+  G IP  LG   +L    L  N LTG++P  L  L +L +     +   N L  E+P  +            +LSSL   + ++ N L+G IP E+G L  L  + L  +  SG++P +L  L NL+ L L++NN+ G
Sbjct:  500 MDLSMNRFVGTIPGWLGTLPDLFYLDLSDNFLTGELPKELFQLRALMSQKAYDATERNYL--ELPVFVNPNNVTTNQQYNQLSSLPPTIYIKRNNLTGTIPVEVGQLKVLHILELLGNNFSGSIPDELSNLTNLERLDLSNNNLSG 643          
BLAST of EY659316 vs. ExPASy Swiss-Prot
Match: Y4374_ARATH (Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana GN=At4g23740 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.044e-12
Identity = 38/100 (38.00%), Postives = 58/100 (58.00%), Query Frame = 1
Query:  424 LTGKIPPS-LGHLTSLQALSLRHNLLAGEIPPSIGRLSSLEVLALRSNQLSGEIPRELGDLSQLRYISLPADGLSGTLPPKLGKLNNLQELWLTSNNVMG 720
            L G+IPP+ +  L++L+ LSLR NL++GE P     L  L  L L+ N LSG +P +      L  ++L  +G +GT+P  L +L  +Q L L +N + G
Sbjct:   80 LNGQIPPNTISRLSALRVLSLRSNLISGEFPKDFVELKDLAFLYLQDNNLSGPLPLDFSVWKNLTSVNLSNNGFNGTIPSSLSRLKRIQSLNLANNTLSG 179          
BLAST of EY659316 vs. ExPASy Swiss-Prot
Match: POPC_RALSO (Protein popC OS=Ralstonia solanacearum GN=popC PE=4 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 3.044e-12
Identity = 57/164 (34.76%), Postives = 82/164 (50.00%), Query Frame = 1
Query:  223 NDTKVGDLPAHEVIYPTTHFMVPFLTTWGIYFMLITLDLSKNQLTGIIPTSLGNSRNLKRHTLGQNLLTGKIPPSLGHLTSLQALSLRHNLLAGEIPPSIGRLSSLEVLALRSNQLSGEIPRELGDLSQLRYISLPADGLSGTLPPKLGKLNNLQELWLTSNNV 714
            ++TK+ DLPA                + G  F L TL L  N   G +P S G    L+  TL  N +     PS+G  +SLQ L++    LAG +P   G L +L  L+L + QL  E+P   G+L  L+ +SL  +    TLP  LG L+ L+EL L +++V
Sbjct:  413 SNTKLRDLPA----------------SIGNLFTLKTLSLQDNPKLGSLPASFGQLSGLQELTLNGNRIHEL--PSMGGASSLQTLTVDDTALAG-LPADFGALRNLAHLSLSNTQLR-ELPANTGNLHALKTLSLQGNQQLATLPSSLGYLSGLEELTLKNSSV 556          
BLAST of EY659316 vs. ExPASy Swiss-Prot
Match: SRF5_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana GN=SRF5 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.975e-12
Identity = 41/111 (36.94%), Postives = 62/111 (55.86%), Query Frame = 1
Query:  322 LITLDLSKNQLTGIIPTSLGNSRNLKRHTLGQNLLTGKIPPSLGHLTSLQALSLRHNLLAGEIPPSIGRLSSLEVLALRSNQLSGEIPRELGDLSQLRYISLPADGLSGTL 654
            L T DLSKN L G IP  L    N+      +N L G +P SL  + +LQ+++L  N L GE+P    +LS LE L    N+LSG++P+   +L+ L+ + L  +  +G +
Sbjct:   94 LTTFDLSKNNLKGNIPYQL--PPNIANLDFSENELDGNVPYSLSQMKNLQSINLGQNKLNGELPDMFQKLSKLETLDFSLNKLSGKLPQSFANLTSLKKLHLQDNRFTGDI 202          
BLAST of EY659316 vs. ExPASy Swiss-Prot
Match: Y5020_ARATH (Probable inactive receptor kinase At5g10020 OS=Arabidopsis thaliana GN=At5g10020 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 6.315e-12
Identity = 42/121 (34.71%), Postives = 62/121 (51.24%), Query Frame = 1
Query:  331 LDLSKNQLTGIIPTSLGNSRNLKRHTLGQNLLTGKIPPS---------LGHLTSLQALSLRHNLLAGEIPPSIGRLSSLEVLALRSNQLSGEIPRELGDLSQLRYISLPADGLSGTLPPKL 666
            +DLS N+ +G IP S     +L+   L +N L G IP           L     ++ L L  N L G +P  IG +  ++VL L +N+LSGE+P +L  LS L ++ L  +   G +P KL
Sbjct:  416 IDLSSNKFSGFIPVSFFTFASLRSLNLSRNNLEGPIPFRGSRASELLVLNSYPQMELLDLSTNSLTGMLPGDIGTMEKIKVLNLANNKLSGELPSDLNKLSGLLFLDLSNNTFKGQIPNKL 536          

HSP 2 Score: 20.7866 bits (42), Expect = 6.315e-12
Identity = 8/12 (66.67%), Postives = 9/12 (75.00%), Query Frame = 3
Query:  261 DLSDNTLHGSIP 296
            DLS N L GS+P
Sbjct:  370 DLSSNNLSGSLP 381          
BLAST of EY659316 vs. ExPASy Swiss-Prot
Match: SHOC2_CAEEL (Leucine-rich repeat protein soc-2 OS=Caenorhabditis elegans GN=soc-2 PE=1 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 6.781e-12
Identity = 50/131 (38.17%), Postives = 78/131 (59.54%), Query Frame = 1
Query:  322 LITLDLSKNQLTGIIPTSLGNSRNLKRHTLGQNLLTGKIPPSLGHLTSLQALSLRHNLLAGEIPPSIGRLSSLEVLALRSNQLSGEIPRELGDLSQLRYISLPADGLSGTLPPKLGKLNNLQELWLTSNNV 714
            L  L L KN+LT  +PT +G   NLK+  L +N LT  +P SL  L SL+ L LRHN L  E+P  I ++ SLE L LR N++   +  ++G+LS+L+ + +  + +   LP  +GKL +L    ++ N++
Sbjct:   98 LTELFLYKNKLT-CLPTEIGQLVNLKKLGLSENALT-SLPDSLASLESLETLDLRHNKLT-EVPSVIYKIGSLETLWLRYNRIVA-VDEQIGNLSKLKMLDVRENKIR-ELPSAIGKLTSLVVCLVSYNHL 223          
The following BLAST results are available for this feature:
BLAST of EY659316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
LRRC7_RAT8.010e-1332.30Leucine-rich repeat-containing protein 7 OS=Rattus... [more]
LRRC7_MOUSE8.010e-1332.30Leucine-rich repeat-containing protein 7 OS=Mus mu... [more]
SRF1_ARATH1.366e-1237.40Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsi... [more]
Y5977_ARATH1.784e-1233.97Probable leucine-rich repeat receptor-like protein... [more]
PSYR1_ARATH2.331e-1234.56Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]
Y4374_ARATH3.044e-1238.00Probable inactive receptor kinase At4g23740 OS=Ara... [more]
POPC_RALSO3.044e-1234.76Protein popC OS=Ralstonia solanacearum GN=popC PE=... [more]
SRF5_ARATH3.975e-1236.94Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsi... [more]
Y5020_ARATH6.315e-1234.71Probable inactive receptor kinase At5g10020 OS=Ara... [more]
SHOC2_CAEEL6.781e-1238.17Leucine-rich repeat protein soc-2 OS=Caenorhabditi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-G09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659316 ID=EY659316; Name=EY659316; organism=Citrus sinensis; type=EST; length=902bp
ATCAAATTAGCGCATGCAAAATGATCTAACTACTGAGTGACTGAGCAAAC
TGATAGTGTAAAACAACCATCTTAGAATTCAAAGTTGAAAATAAAAAAAT
AAATTGGATGAACGGTCTTCATGGGCATCTGGTGGTTCTAATTTCTAAAA
CAGGGCTCTTACTAATCCTTGTTACTGCTATGTCAACTTGGCTCCTAATT
CAAATTACAGAGTACTGCTGAAAATGATACTAAAGTAGGAGATCTACCTG
CTCATGAAGTGATCTATCCGACAACACACTTCATGGTTCCATTCCTTACC
ACATGGGGGATCTATTTCATGCTTATCACTCTAGATTTATCAAAAAATCA
ATTAACTGGGATCATACCAACAAGCTTGGGGAATTCGAGGAACCTAAAAA
GACACACGTTGGGCCAGAACTTACTCACGGGGAAGATACCACCATCGTTG
GGGCACTTGACATCTCTTCAAGCATTGTCTCTGCGCCATAACTTACTCGC
GGGGGAGATACCACCATCGATTGGGCGCTTATCGTCTCTTGAAGTATTGG
CACTAAGGAGCAACCAACTATCGGGGGAAATTCCTCGTGAACTGGGAGAC
CTCTCTCAGCTCCGGTATATATCTCTGCCGGCAGATGGACTCAGCGGTAC
ACTCCCACCAAAACTTGGAAAATTAAACAATCTTCAAGAATTGTGGCTGA
CATCCAACAATGTAATGGGGTGATTTGCCACATGATTATGAGGATCTAAA
GGATCTGACCACTTTTGAAATATCAGGGAAATATTTGTCTGGTCCGGATC
CCCACATTCATTGCAAAATGGGTCAACCTCTATTCTCTGGTTGTCACTGA
CCTACAAACGAAAGGCTGATCCTTCCCAGATCAGCTAATTNGAGTAGTAT
AT
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