EY659316

Overview
NameEY659316
Unique NameEY659316
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length902
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659316 vs. ExPASy Swiss-Prot
Match: LRRC7_HUMAN (Leucine-rich repeat-containing protein 7 OS=Homo sapiens GN=LRRC7 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.781e-12
Identity = 51/161 (31.68%), Postives = 86/161 (53.42%), Query Frame = 1
Query:  226 DTKVGDLPAHEVIYPTTHFMVPFLTTWGIYFMLITLDLSKNQLTGIIPTSLGNSRNLKRHTLGQNLLTGKIPPSLGHLTSLQALSLRHNLLAGEIPPSIGRLSSLEVLALRSNQLSGEIPRELGDLSQLRYISLPADGLSGTLPPKLGKLNNLQELWLTSN 708
            D  +    A E +  +++ +     + G+   L TL +  NQLT ++P ++GN   L+      N L   +P ++G+L SL+ L++  N L  E+P  IG   ++ V++LRSN+L   +P E+G + +LR ++L +D     LP    KL  L  LWL+ N
Sbjct:  246 DMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLT-MLPNTIGNLSLLEEFDCSCNELES-LPSTIGYLHSLRTLAVDENFLP-ELPREIGSCKNVTVMSLRSNKLE-FLPEEIGQMQKLRVLNL-SDNRLKNLPFSFTKLKELAALWLSDN 401          
BLAST of EY659316 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 8.856e-12
Identity = 45/109 (41.28%), Postives = 60/109 (55.05%), Query Frame = 1
Query:  331 LDLSKNQLTGIIPTSLGNSRNLKRHTLGQNLLTGKIPPSLGHLTSLQALSLRHNLLAGEIPPSIGRLSSLEVLALRSNQLSGEIPRELGDLSQLRYISLPADGLSGTLP 657
            LDL    L+G +   L    NL+   L  N +TG+IP  LG L  L +L L  N ++G IP S+G+L  L  L L +N LSGEIPR L  L  L  + +  + LSG +P
Sbjct:   75 LDLGSANLSGELVPQLAQLPNLQYLELFNNNITGEIPEELGDLMELVSLDLFANNISGPIPSSLGKLGKLRFLRLYNNSLSGEIPRSLTAL-PLDVLDISNNRLSGDIP 182          

HSP 2 Score: 69.707 bits (169), Expect = 2.577e-11
Identity = 43/110 (39.09%), Postives = 63/110 (57.27%), Query Frame = 1
Query:  391 NLKRHTLGQNLLTGKIPPSLGHLTSLQALSLRHNLLAGEIPPSIGRLSSLEVLALRSNQLSGEIPRELGDLSQLRYISLPADGLSGTLPPKLGKLNNLQELWLTSNNVMG 720
            ++ R  LG   L+G++ P L  L +LQ L L +N + GEIP  +G L  L  L L +N +SG IP  LG L +LR++ L  + LSG +P  L  L  L  L +++N + G
Sbjct:   71 SVTRLDLGSANLSGELVPQLAQLPNLQYLELFNNNITGEIPEELGDLMELVSLDLFANNISGPIPSSLGKLGKLRFLRLYNNSLSGEIPRSLTAL-PLDVLDISNNRLSG 179          
BLAST of EY659316 vs. ExPASy Swiss-Prot
Match: Y2267_ARATH (Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.157e-11
Identity = 49/133 (36.84%), Postives = 75/133 (56.39%), Query Frame = 1
Query:  328 TLDLSKNQLTGIIPT-SLGNSRNLKRHTLGQNLLTGKIPPSLGHLTSLQALSLRHNLLAGEIPPSIGRLSSLEVLALRSNQLSGEIPRELGDLSQLRYISLPADGLSGTLPP-KLGKLNNLQELWLTSNNVMG 720
            +L L    L G IP+ SLG    L+  +L  N L+G+IP    +LT L++L L+HN  +GE P S  +L++L  L + SN  +G IP  + +L+ L  + L  +G SG LP   LG    L +  +++NN+ G
Sbjct:   70 SLRLPGTGLVGQIPSGSLGRLTELRVLSLRSNRLSGQIPSDFSNLTHLRSLYLQHNEFSGEFPTSFTQLNNLIRLDISSNNFTGSIPFSVNNLTHLTGLFLGNNGFSGNLPSISLG----LVDFNVSNNNLNG 198          
BLAST of EY659316 vs. ExPASy Swiss-Prot
Match: Y1699_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g69990 OS=Arabidopsis thaliana GN=At1g69990 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.365e-11
Identity = 46/116 (39.66%), Postives = 65/116 (56.03%), Query Frame = 1
Query:  322 LITLDLSKNQLTGIIPTSLGNSRNLKRHTLGQNLLTGKIPPSL-GHLTSLQALSLRHNLLAGEIPPSIGRLSSLEVLALRSNQLSGEIPRELGDLSQLRYISLPADGLSGTLPPKL 666
            +++L L   QL+G IP SL   R+L+   L  N  +G IP  +   L  L  L L  N L+G IP  I     L  LAL  N+L+G IP EL  L++L+ +SL  + LSG++P +L
Sbjct:   67 ILSLQLQSMQLSGQIPESLKLCRSLQSLDLSFNDFSGLIPSQICSWLPYLVTLDLSGNKLSGSIPSQIVDCKFLNSLALNQNKLTGSIPSELTRLNRLQRLSLADNDLSGSIPSEL 182          
BLAST of EY659316 vs. ExPASy Swiss-Prot
Match: SHOC2_CAEBR (Leucine-rich repeat protein soc-2 OS=Caenorhabditis briggsae GN=soc-2 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.365e-11
Identity = 48/131 (36.64%), Postives = 79/131 (60.31%), Query Frame = 1
Query:  322 LITLDLSKNQLTGIIPTSLGNSRNLKRHTLGQNLLTGKIPPSLGHLTSLQALSLRHNLLAGEIPPSIGRLSSLEVLALRSNQLSGEIPRELGDLSQLRYISLPADGLSGTLPPKLGKLNNLQELWLTSNNV 714
            L  L L KN+LT  +PT +G   NLK+  L +N L+  +P SL  L SL+ L LRHN L  E+P  I +++SLE L LR N++   +  ++G+L +L+ + +  + +   LP  +GKL++L    ++ N++
Sbjct:   98 LTELFLYKNKLT-CLPTEIGQLVNLKKLGLSENALS-SLPDSLSSLESLETLDLRHNKLT-EVPAVIYKITSLETLWLRYNRIVA-VDEQIGNLQKLKMLDVRENKIR-ELPSAIGKLSSLVVCLVSYNHL 223          
BLAST of EY659316 vs. ExPASy Swiss-Prot
Match: Y5830_ARATH (Probable inactive receptor kinase At5g58300 OS=Arabidopsis thaliana GN=At5g58300 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.395e-11
Identity = 44/120 (36.67%), Postives = 70/120 (58.33%), Query Frame = 1
Query:  361 IIPTSLGNSRNLKRHTLGQNLLTGKIPPSLGHLTSLQALSLRHNLLAGEIPPSIGRLSSLEVLALRSNQLSGEIPRELGDLSQLRYISLPADGLSGTLPPKLGKLNNLQELWLTSNNVMG 720
            I P +LG   +L+  +L  NLL+G +PP +  L SL  + L+HN  +GE+P  + R   L +L L  N  +G+IP    +L QL  +SL  + LSG + P L  + +L+ L L++N++ G
Sbjct:  103 IPPNTLGKLESLRILSLRSNLLSGNLPPDIHSLPSLDYIYLQHNNFSGEVPSFVSR--QLNILDLSFNSFTGKIPATFQNLKQLTGLSLQNNKLSGPV-PNLDTV-SLRRLNLSNNHLNG 218          

HSP 2 Score: 67.781 bits (164), Expect = 9.792e-11
Identity = 41/100 (41.00%), Postives = 56/100 (56.00%), Query Frame = 1
Query:  424 LTGKIPPS-LGHLTSLQALSLRHNLLAGEIPPSIGRLSSLEVLALRSNQLSGEIPRELGDLSQLRYISLPADGLSGTLPPKLGKLNNLQELWLTSNNVMG 720
            L G IPP+ LG L SL+ LSLR NLL+G +PP I  L SL+ + L+ N  SGE+P  +    QL  + L  +  +G +P     L  L  L L +N + G
Sbjct:   99 LLGPIPPNTLGKLESLRILSLRSNLLSGNLPPDIHSLPSLDYIYLQHNNFSGEVPSFVS--RQLNILDLSFNSFTGKIPATFQNLKQLTGLSLQNNKLSG 196          
BLAST of EY659316 vs. ExPASy Swiss-Prot
Match: LRRA_DICDI (Leucine-rich repeat protein lrrA OS=Dictyostelium discoideum GN=lrrA PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.395e-11
Identity = 50/129 (38.76%), Postives = 72/129 (55.81%), Query Frame = 1
Query:  331 LDLSKNQLTGIIPTSLGNSRNLKRHTLGQNLLT-GKIPPSLGHLTSLQALSLRHNLLAGEIPPSIGRLSSLEVLALRSNQLSGEIPRELGDLSQLRYISLPADGLSGTLPPKLGKLNNLQELWLTSNNV 714
            LDL  N +  I+P  +GN  NL+   L QN LT   IP  +G L +L+ L L +NLL   +PP I  + +L+     +NQL   IP E+G+LS L  I+L  + L+ ++P   G L+ LQ   L SN +
Sbjct:  298 LDLFGNNMR-IVPREVGNLINLQTLDLRQNKLTIDNIPSEIGKLVNLKKLLLSNNLLIA-LPPEIASMKALKEFEASNNQLQA-IPTEIGELSGLTKINLSGNKLT-SIPASFGNLSELQICDLKSNEI 422          
BLAST of EY659316 vs. ExPASy Swiss-Prot
Match: LAP2_MOUSE (Protein LAP2 OS=Mus musculus GN=Erbb2ip PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.395e-11
Identity = 43/127 (33.86%), Postives = 71/127 (55.91%), Query Frame = 1
Query:  328 TLDLSKNQLTGIIPTSLGNSRNLKRHTLGQNLLTGKIPPSLGHLTSLQALSLRHNLLAGEIPPSIGRLSSLEVLALRSNQLSGEIPRELGDLSQLRYISLPADGLSGTLPPKLGKLNNLQELWLTSN 708
            TL + +NQL   +P S+G  R+++      N +   +P S+G LT+++  +  HN L  ++PP IG   ++ VL L  N+L   +P E+GD+ +L+ I+L +D     LP    KL  L  +WL+ N
Sbjct:  280 TLKIDENQLM-YLPDSIGGLRSIEELDCSFNEIEA-LPSSIGQLTNMRTFAADHNYLQ-QLPPEIGNWKNITVLFLHCNKLE-TLPEEMGDMQKLKVINL-SDNRLKNLPFSFTKLQQLTAMWLSDN 401          
BLAST of EY659316 vs. ExPASy Swiss-Prot
Match: Y5332_ARATH (Probable inactive receptor kinase At5g53320 OS=Arabidopsis thaliana GN=At5g53320 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.741e-11
Identity = 43/112 (38.39%), Postives = 60/112 (53.57%), Query Frame = 1
Query:  331 LDLSKNQLTGIIPTSLGNSRNLKRHTLGQNLLTGKIPPSLGHLTSLQALSLRHNLLAGEIPPSIGRLSSLEVLALRSNQLSGEIPRELGDLSQLRYISLPADGLSGTLPPKL 666
            L LS N ++G  PT+L   +NL    L  N  +G +P  L     LQ L L +N   G IP SIG+L+ L  L L  N+ SGEIP     +  L+ ++L  + L+GT+P  L
Sbjct:   95 LILSSNNISGTFPTTLQALKNLTELKLDFNEFSGPLPSDLSSWERLQVLDLSNNRFNGSIPSSIGKLTLLHSLNLAYNKFSGEIPDL--HIPGLKLLNLAHNNLTGTVPQSL 204          
BLAST of EY659316 vs. ExPASy Swiss-Prot
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana GN=SRF3 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.741e-11
Identity = 48/130 (36.92%), Postives = 70/130 (53.85%), Query Frame = 1
Query:  331 LDLSKNQLTGIIPTSLGNSRNLKRHTLGQNLLTGKIPPSLGHLTSLQALSLRHNLLAGEIPPSIGRLSSLEVLALRSNQLSGEIPRELGDLSQLRYISLPADGLSGTLPPKLGKLNNLQELWLTSNNVMG 720
            +D S N++ G IP++L  +  L+   L  N  TG IP SLG L+ L  +SL  NLL+GE+P     L  L  L + SN +SG +P  + +L  L  + +  + LSGTL    G    LQ+L + +N   G
Sbjct:  103 IDFSNNRIGGSIPSTLPVT--LQHFFLSANQFTGSIPESLGTLSFLNDMSLNDNLLSGELPDVFQNLVGLINLDISSNNISGTLPPSMENLLTLTTLRVQNNQLSGTLDVLQGL--PLQDLNIENNLFSG 228          
The following BLAST results are available for this feature:
BLAST of EY659316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
LRRC7_HUMAN6.781e-1231.68Leucine-rich repeat-containing protein 7 OS=Homo s... [more]
SERK5_ARATH8.856e-1241.28Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
Y2267_ARATH1.157e-1136.84Probable inactive receptor kinase At2g26730 OS=Ara... [more]
Y1699_ARATH3.365e-1139.66Probable LRR receptor-like serine/threonine-protei... [more]
SHOC2_CAEBR3.365e-1136.64Leucine-rich repeat protein soc-2 OS=Caenorhabditi... [more]
Y5830_ARATH4.395e-1136.67Probable inactive receptor kinase At5g58300 OS=Ara... [more]
LRRA_DICDI4.395e-1138.76Leucine-rich repeat protein lrrA OS=Dictyostelium ... [more]
LAP2_MOUSE4.395e-1133.86Protein LAP2 OS=Mus musculus GN=Erbb2ip PE=1 SV=2[more]
Y5332_ARATH5.741e-1138.39Probable inactive receptor kinase At5g53320 OS=Ara... [more]
SRF3_ARATH5.741e-1136.92Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-G09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659316 ID=EY659316; Name=EY659316; organism=Citrus sinensis; type=EST; length=902bp
ATCAAATTAGCGCATGCAAAATGATCTAACTACTGAGTGACTGAGCAAAC
TGATAGTGTAAAACAACCATCTTAGAATTCAAAGTTGAAAATAAAAAAAT
AAATTGGATGAACGGTCTTCATGGGCATCTGGTGGTTCTAATTTCTAAAA
CAGGGCTCTTACTAATCCTTGTTACTGCTATGTCAACTTGGCTCCTAATT
CAAATTACAGAGTACTGCTGAAAATGATACTAAAGTAGGAGATCTACCTG
CTCATGAAGTGATCTATCCGACAACACACTTCATGGTTCCATTCCTTACC
ACATGGGGGATCTATTTCATGCTTATCACTCTAGATTTATCAAAAAATCA
ATTAACTGGGATCATACCAACAAGCTTGGGGAATTCGAGGAACCTAAAAA
GACACACGTTGGGCCAGAACTTACTCACGGGGAAGATACCACCATCGTTG
GGGCACTTGACATCTCTTCAAGCATTGTCTCTGCGCCATAACTTACTCGC
GGGGGAGATACCACCATCGATTGGGCGCTTATCGTCTCTTGAAGTATTGG
CACTAAGGAGCAACCAACTATCGGGGGAAATTCCTCGTGAACTGGGAGAC
CTCTCTCAGCTCCGGTATATATCTCTGCCGGCAGATGGACTCAGCGGTAC
ACTCCCACCAAAACTTGGAAAATTAAACAATCTTCAAGAATTGTGGCTGA
CATCCAACAATGTAATGGGGTGATTTGCCACATGATTATGAGGATCTAAA
GGATCTGACCACTTTTGAAATATCAGGGAAATATTTGTCTGGTCCGGATC
CCCACATTCATTGCAAAATGGGTCAACCTCTATTCTCTGGTTGTCACTGA
CCTACAAACGAAAGGCTGATCCTTCCCAGATCAGCTAATTNGAGTAGTAT
AT
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