EY659290

Overview
NameEY659290
Unique NameEY659290
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length906
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: STHA_PSEFL (Soluble pyridine nucleotide transhydrogenase OS=Pseudomonas fluorescens GN=sthA PE=1 SV=3)

HSP 1 Score: 63.1586 bits (152), Expect = 2.329e-18
Identity = 46/126 (36.51%), Postives = 63/126 (50.00%), Query Frame = 2
Query:  101 IYKRLLSNAG------VKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQR-APIPGQELAI-TSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEM 454
            I K++ S  G      V L+ G G       VEV   +G      AKHI+IATGSR  R A I      I  SD  LSL   P++ ++ G G I  E+ASI+ G+G  V+L+  ++  L   D E+
Sbjct:   93 ISKQVASRTGYYARNRVDLFFGTGSFADEQTVEVVCANGVVEKLVAKHIIIATGSRPYRPADIDFHHPRIYDSDTILSLGHTPRKLIIYGAGVIGCEYASIFSGLGVLVELVDNRDQLLSFLDSEI 218          

HSP 2 Score: 50.447 bits (119), Expect = 2.329e-18
Identity = 23/55 (41.82%), Postives = 37/55 (67.27%), Query Frame = 1
Query:  565 GEEIVADVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGD 729
            G++I AD +L+  GR  NT +L ++ + V+V+  G +EVD+N RT V +I+  GD
Sbjct:  256 GKKIKADALLWCNGRTGNTDKLGMENIGVKVNSRGQIEVDENYRTCVTNIYGAGD 310          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: STHA_PSEPG (Soluble pyridine nucleotide transhydrogenase OS=Pseudomonas putida (strain GB-1) GN=sthA PE=3 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 2.329e-18
Identity = 45/126 (35.71%), Postives = 63/126 (50.00%), Query Frame = 2
Query:  101 IYKRLLSNAG------VKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQR-APIPGQELAI-TSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEM 454
            I K++ S  G      V ++ G G       VEV   +G     +AKHI+IATGSR  R A I      +  SD  LSL   P++ +V G G I  E+ASI+ G+G  V+L+  +   L   D E+
Sbjct:   93 ISKQVASRTGYYARNRVDVFFGTGSFADEQTVEVVCPNGVVEKLNAKHIIIATGSRPYRPADIDFHHPRVYDSDTILSLSHTPRKLIVYGAGVIGCEYASIFSGLGVLVELVDNRGQLLSFLDSEI 218          

HSP 2 Score: 51.9878 bits (123), Expect = 2.329e-18
Identity = 23/55 (41.82%), Postives = 37/55 (67.27%), Query Frame = 1
Query:  565 GEEIVADVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGD 729
            G++I AD +L+  GR  NT +L L+ + ++V+  G +EVD+  RT VP+I+  GD
Sbjct:  256 GKKIKADALLWCNGRTGNTDKLGLENIGIKVNSRGQIEVDEAYRTTVPNIYGAGD 310          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: MERA_SHEPU (Mercuric reductase OS=Shewanella putrefaciens GN=merA PE=3 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 3.017e-18
Identity = 47/130 (36.15%), Postives = 69/130 (53.08%), Query Frame = 2
Query:   59 LLQKKTDEILRLNGI-YKRLL-SNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG--QELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLR 436
            L Q++T  +  L    Y+ +L +N  + L +G  +    N + V + DGT+ +  A  ILIATGS     PI G  +    TS EAL  +ELP+  VV+G   +A+E A  +R +GS V +L R  L  R
Sbjct:  174 LTQQQTARVEELRAAKYQNILETNPALSLLKGWAQFKNANTLIVRKNDGTEQAVHADKILIATGSTPTIPPIDGLTETPYWTSTEALFAQELPQHLVVIGSSVVALEIAQAYRRLGSEVTILARHTLLYR 303          

HSP 2 Score: 48.1358 bits (113), Expect = 3.017e-18
Identity = 30/87 (34.48%), Postives = 46/87 (52.87%), Query Frame = 1
Query:  478 EGRGINLHPRTTIKELIKSEESIKVITDHGEEIVADVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGDGTN 738
            E  GI +   T   ++        + T+ G+ +  D +L +TGR  NT +LNL AV V  ++ G + V++   TNVP I+A GD  N
Sbjct:  317 EKEGIRVLNSTQATKVTHDGSQFTLETNAGD-LRCDRLLVSTGRHANTCQLNLGAVGVTTNKKGEIVVNERMETNVPGIYAAGDCCN 402          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: STHA_PSEE4 (Soluble pyridine nucleotide transhydrogenase OS=Pseudomonas entomophila (strain L48) GN=sthA PE=3 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 3.029e-18
Identity = 45/126 (35.71%), Postives = 62/126 (49.21%), Query Frame = 2
Query:  101 IYKRLLSNAG------VKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQR-APIPGQELAI-TSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEM 454
            I K++ S  G      V ++ G G       VEV   +G      AKHI+IATGSR  R A I      +  SD  LSL   P++ +V G G I  E+ASI+ G+G  V+L+  +   L   D E+
Sbjct:   93 ISKQVASRTGYYARNRVDVFFGTGSFADEQTVEVVCPNGVVEKLVAKHIIIATGSRPYRPADIDFHHPRVYDSDTILSLSHTPRKLIVYGAGVIGCEYASIFSGLGVLVELVDNRGQLLSFLDSEI 218          

HSP 2 Score: 52.7582 bits (125), Expect = 3.029e-18
Identity = 24/55 (43.64%), Postives = 37/55 (67.27%), Query Frame = 1
Query:  565 GEEIVADVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGD 729
            G++I AD +L+  GR  NT RL L+ + ++V+  G +EVD   RT+VP+I+  GD
Sbjct:  256 GKKIKADALLWCNGRTGNTDRLGLENIGIKVNSRGQIEVDQAYRTSVPNIYGAGD 310          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: DLDH_THESC (Dihydrolipoyl dehydrogenase OS=Thermus scotoductus GN=lpd PE=1 SV=2)

HSP 1 Score: 58.9214 bits (141), Expect = 3.029e-18
Identity = 43/126 (34.13%), Postives = 62/126 (49.21%), Query Frame = 2
Query:   41 DFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAP-IPGQELAITSDEALSLEE-LPKRAVVLGGGYIAVEFASIWRGMGSTVDLL 412
            + D KKL   +   + +L G    LL    V+L  G  +  GP E+EV        +Y A+  +IATGS        P  E    S  AL +EE +PKR +V+GGG + +E   I+  +GS V L+
Sbjct:   75 ELDLKKLGAWRDGVVKKLTGGVAGLLKGNKVELLRGFARFKGPREIEVNGE-----TYGAQSFIIATGSEPMPLKGFPFGEDVWDSTRALRVEEGIPKRLLVIGGGAVGLELGQIYHRLGSEVTLI 195          

HSP 2 Score: 54.299 bits (129), Expect = 3.029e-18
Identity = 29/90 (32.22%), Postives = 48/90 (53.33%), Query Frame = 1
Query:  475 LEGRGINLHPRTTIKELIKSEESIKVITDHG-----EEIVADVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGD 729
            LE  G+ +   T      K ++ + V+ +       EEIV D +L A GR P T+ L L+   V+VD+ G ++V+    T+ P ++A+GD
Sbjct:  217 LEKEGLKVRTGTKAVGYEKKQDGLHVLLEAAQGGSQEEIVVDKILVAVGRRPRTEGLGLEKAGVKVDERGFIQVNARMETSAPGVYAIGD 306          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: STHA_PSEA7 (Soluble pyridine nucleotide transhydrogenase OS=Pseudomonas aeruginosa (strain PA7) GN=sthA PE=3 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 5.120e-18
Identity = 41/126 (32.54%), Postives = 57/126 (45.24%), Query Frame = 2
Query:  101 IYKRLLSNAG------VKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG--QELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEM 454
            I K++ S  G      + ++ G    V    VEV    G      A   +IATGSR  R             SD  LSL   P+R ++ G G I  E+ASI+ G+G  VDL+  ++  L   DDE+
Sbjct:   93 ISKQVASRTGYYARNRIDMFTGTASFVDERTVEVVTPSGAVERLVADQFVIATGSRPYRPSDINFNHPRVYDSDTILSLSHTPRRLIIYGAGVIGCEYASIFSGLGVLVDLIDTRDQLLSFLDDEI 218          

HSP 2 Score: 54.299 bits (129), Expect = 5.120e-18
Identity = 26/55 (47.27%), Postives = 39/55 (70.91%), Query Frame = 1
Query:  565 GEEIVADVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGD 729
            G++I AD +L+  GR  NT +L L+ V ++V+  G VEVD+N RT+V +I+A GD
Sbjct:  256 GKKIKADALLWCNGRTGNTDKLGLENVGIKVNSRGQVEVDENYRTSVSNIFAAGD 310          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: STHA_PSEAE (Soluble pyridine nucleotide transhydrogenase OS=Pseudomonas aeruginosa GN=sthA PE=1 SV=2)

HSP 1 Score: 58.151 bits (139), Expect = 6.657e-18
Identity = 41/126 (32.54%), Postives = 57/126 (45.24%), Query Frame = 2
Query:  101 IYKRLLSNAG------VKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG--QELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEM 454
            I K++ S  G      + ++ G    V    VEV    G      A   +IATGSR  R             SD  LSL   P+R ++ G G I  E+ASI+ G+G  VDL+  ++  L   DDE+
Sbjct:   93 ISKQVASRTGYYARNRIDMFTGTASFVDERTVEVVTPSGAVERLVADQFVIATGSRPYRPSDINFNHPRVYDSDTILSLSHTPRRLIIYGAGVIGCEYASIFSGLGVLVDLIDTRDQLLSFLDDEI 218          

HSP 2 Score: 53.9138 bits (128), Expect = 6.657e-18
Identity = 25/55 (45.45%), Postives = 39/55 (70.91%), Query Frame = 1
Query:  565 GEEIVADVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGD 729
            G++I AD +L+  GR  NT +L L+ V ++V+  G +EVD+N RT+V +I+A GD
Sbjct:  256 GKKIKADALLWCNGRTGNTDKLGLENVGIKVNSRGQIEVDENYRTSVSNIFAAGD 310          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: STHA_PSEAB (Soluble pyridine nucleotide transhydrogenase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=sthA PE=3 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 6.657e-18
Identity = 41/126 (32.54%), Postives = 57/126 (45.24%), Query Frame = 2
Query:  101 IYKRLLSNAG------VKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG--QELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEM 454
            I K++ S  G      + ++ G    V    VEV    G      A   +IATGSR  R             SD  LSL   P+R ++ G G I  E+ASI+ G+G  VDL+  ++  L   DDE+
Sbjct:   93 ISKQVASRTGYYARNRIDMFTGTASFVDERTVEVVTPSGAVERLVADQFVIATGSRPYRPSDINFNHPRVYDSDTILSLSHTPRRLIIYGAGVIGCEYASIFSGLGVLVDLIDTRDQLLSFLDDEI 218          

HSP 2 Score: 53.9138 bits (128), Expect = 6.657e-18
Identity = 25/55 (45.45%), Postives = 39/55 (70.91%), Query Frame = 1
Query:  565 GEEIVADVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGD 729
            G++I AD +L+  GR  NT +L L+ V ++V+  G +EVD+N RT+V +I+A GD
Sbjct:  256 GKKIKADALLWCNGRTGNTDKLGLENVGIKVNSRGQIEVDENYRTSVSNIFAAGD 310          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: STHA_PSEA8 (Soluble pyridine nucleotide transhydrogenase OS=Pseudomonas aeruginosa (strain LESB58) GN=sthA PE=3 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 6.657e-18
Identity = 41/126 (32.54%), Postives = 57/126 (45.24%), Query Frame = 2
Query:  101 IYKRLLSNAG------VKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPG--QELAITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEM 454
            I K++ S  G      + ++ G    V    VEV    G      A   +IATGSR  R             SD  LSL   P+R ++ G G I  E+ASI+ G+G  VDL+  ++  L   DDE+
Sbjct:   93 ISKQVASRTGYYARNRIDMFTGTASFVDERTVEVVTPSGAVERLVADQFVIATGSRPYRPSDINFNHPRVYDSDTILSLSHTPRRLIIYGAGVIGCEYASIFSGLGVLVDLIDTRDQLLSFLDDEI 218          

HSP 2 Score: 53.9138 bits (128), Expect = 6.657e-18
Identity = 25/55 (45.45%), Postives = 39/55 (70.91%), Query Frame = 1
Query:  565 GEEIVADVVLFATGRAPNTKRLNLKAVVVEVDQTGAVEVDDNSRTNVPSIWAVGD 729
            G++I AD +L+  GR  NT +L L+ V ++V+  G +EVD+N RT+V +I+A GD
Sbjct:  256 GKKIKADALLWCNGRTGNTDKLGLENVGIKVNSRGQIEVDENYRTSVSNIFAAGD 310          
BLAST of EY659290 vs. ExPASy Swiss-Prot
Match: DLDH_MYCGE (Dihydrolipoyl dehydrogenase OS=Mycoplasma genitalium GN=pdhD PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.315e-18
Identity = 54/165 (32.73%), Postives = 94/165 (56.97%), Query Frame = 2
Query:    5 ARSYGWEVHEINDFDWKKLLQKKTDEILRLNGIYKRLLSNAGVKLYEGEGKIVGPNEVEVTQLDGTKLSYSAKHILIATGSRAQRAPIPGQELA------ITSDEALSLEELPKRAVVLGGGYIAVEFASIWRGMGSTVDLLFRKELPLRGFDDEMRAVVAEIWK 481
            A+ YG  ++     DWK+LL++K + + +L    K ++  A V+  EGE  ++  N+V+V        +Y+  +I++ATGSR +   +PG E A      I S +AL+LE +PK+ VV+GGG I VEFA ++  +GS V ++   +  L   D ++  ++++  K
Sbjct:   64 AKDYGITINGQAKLDWKQLLKQKQEVVDKLVAGVKTIIKGAKVESIEGEATVIDKNKVQVNNT-----TYTTNNIIVATGSRPRYLTLPGFEKAQQAGFIIDSTQALALEGVPKKFVVVGGGVIGVEFAFLFASLGSEVTIIQGVDRILEVCDSDVSELISKTLK 223          
The following BLAST results are available for this feature:
BLAST of EY659290 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
STHA_PSEFL2.329e-1836.51Soluble pyridine nucleotide transhydrogenase OS=Ps... [more]
STHA_PSEPG2.329e-1835.71Soluble pyridine nucleotide transhydrogenase OS=Ps... [more]
MERA_SHEPU3.017e-1836.15Mercuric reductase OS=Shewanella putrefaciens GN=m... [more]
STHA_PSEE43.029e-1835.71Soluble pyridine nucleotide transhydrogenase OS=Ps... [more]
DLDH_THESC3.029e-1834.13Dihydrolipoyl dehydrogenase OS=Thermus scotoductus... [more]
STHA_PSEA75.120e-1832.54Soluble pyridine nucleotide transhydrogenase OS=Ps... [more]
STHA_PSEAE6.657e-1832.54Soluble pyridine nucleotide transhydrogenase OS=Ps... [more]
STHA_PSEAB6.657e-1832.54Soluble pyridine nucleotide transhydrogenase OS=Ps... [more]
STHA_PSEA86.657e-1832.54Soluble pyridine nucleotide transhydrogenase OS=Ps... [more]
DLDH_MYCGE8.315e-1832.73Dihydrolipoyl dehydrogenase OS=Mycoplasma genitali... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-E04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659290 ID=EY659290; Name=EY659290; organism=Citrus sinensis; type=EST; length=906bp
AGATGCAAGGAGTTATGGATGGGAGGTACATGAGATAAATGACTTCGACT
GGAAAAAACTTCTGCAAAAGAAGACAGATGAAATACTCAGACTAAATGGA
ATTTACAAGCGATTATTATCTAATGCTGGGGTAAAATTATATGAAGGGGA
GGGAAAGATAGTTGGTCCAAATGAAGTTGAGGTCACACAACTAGATGGCA
CTAAGTTAAGTTACTCAGCAAAGCACATATTGATCGCAACTGGAAGTAGG
GCTCAACGTGCTCCTATTCCTGGCCAGGAGCTGGCTATAACCTCTGACGA
GGCATTGAGCTTGGAAGAATTACCCAAGCGTGCTGTGGTGCTTGGTGGAG
GGTACATTGCTGTTGAGTTTGCTTCCATATGGCGAGGGATGGGTTCTACT
GTGGATCTATTATTTAGAAAGGAACTTCCATTAAGAGGGTTTGATGATGA
AATGCGGGCAGTAGTTGCCGAAATCTGGAAGGGAGGGGAATTAATTTGCA
CCCGAGGACTACCATAAAGGAGTTGATTAAGTCAGAGGAGAGTATAAAAG
TTATTACAGATCATGGTGAAGAGATTGTTGCAGATGTTGTACTCTTTGCC
ACTGGCAGGGCACCTAATACAAAAAGGTTGAATTTGAAAGCTGTTGTGGT
GGAAGTTGATCAAACAGGAGCTGTGGAGGTGGACGATAACTCACGCACCA
ACGTACCTAGTATATGGGCTGTGGGTGATGGAACTAATCGAATGAATCCT
ACCCCTGCGGCTTGATGGAGGGAACATGCTTTGCAAAAACTGTTTTTGGG
GGACACCCTGCAAACCAACTACGGGATGGACCCTGGGCTGGATTTGGCTA
CCTCCTTCTTTGGGAGGGGCCCCATGGAGGGACAGGCCTTAACCAGGAAA
TGGTGT
back to top