EY659278

Overview
NameEY659278
Unique NameEY659278
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7012 contig Csv1_Contig7012:158..1076. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659278 vs. ExPASy Swiss-Prot
Match: MDS1_YEAST (Serine/threonine-protein kinase MDS1/RIM11 OS=Saccharomyces cerevisiae GN=MDS1 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.631e-24
Identity = 60/164 (36.59%), Postives = 90/164 (54.88%), Query Frame = 1
Query:  400 ISYMAERVVGTGSFGVVFQAKCLETGDSVAIKNVLXG*RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNPVLEYISETVYRVS*HYTRMNXHVPILYVQLYTYQICRALKLLHHVGGGGSFETLATKFIGHPHTHQLKNVTFEVPKCLCQVNPT*RYL 891
            IS+    VVG GSFGVVF     ET + VAIK VL   R+KNREL+IM++L+H N++ LK+ F+    +DE+YLN +LEY+ +++Y+   H+      +  L ++ Y +Q+ ++L  LHH       +      +  P T  LK   F   K L    P   Y+
Sbjct:   37 ISFPTTEVVGHGSFGVVFATVIQETNEKVAIKKVLQDKRFKNRELEIMKMLSHINIIDLKYFFYERDSQDEIYLNLILEYMPQSLYQRLRHFVHQRTPMSRLEIKYYMFQLFKSLNYLHHFANVCHRDIKPQNLLVDPETWSLKLCDFGSAKQLKPTEPNVSYI 200          
BLAST of EY659278 vs. ExPASy Swiss-Prot
Match: MCK1_YEAST (Protein kinase MCK1 OS=Saccharomyces cerevisiae GN=MCK1 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.105e-14
Identity = 49/153 (32.03%), Postives = 79/153 (51.63%), Query Frame = 1
Query:  325 NGNGTEAG-QVIATTVGGRNGQPKQTISYMAERVVGTGSFGVVFQAKCLETGDS----VAIKNVLXG*RYKNRELQIMRLLNHPNVVSLKHCFFSTTEKD-ELYLNPVLEYISETVYRVS*HYTRMNXHVPILYVQLYTYQICRALKLLHHVG 765
            NG   + G + IA  V        + +     R +G G+FG V QA   +   +     AIK V     YK+RELQI+R+ +HPN+V L++ F   + +D ++Y +  +E + ET+      Y      +P+ +++LYTYQI R +  LH +G
Sbjct:    7 NGVPLQRGSEFIADDVTSNKSNNTRRMLVKEYRKIGRGAFGTVVQAYLTQDKKNWLGPFAIKKVPAHTEYKSRELQILRIADHPNIVKLQYFFTHLSPQDNKVYQHLAMECLPETLQIEINRYVTNKLEMPLKHIRLYTYQIARGMLYLHGLG 159          

HSP 2 Score: 24.2534 bits (51), Expect = 3.105e-14
Identity = 11/32 (34.38%), Postives = 21/32 (65.62%), Query Frame = 3
Query:  825 VKECDF*SAKMFVPSEPNLT-VSGQNYKPPDL 917
            +K CDF SAK    ++P+++ +  + Y+ P+L
Sbjct:  179 LKICDFGSAKKLEHNQPSISYICSRFYRAPEL 210          
BLAST of EY659278 vs. ExPASy Swiss-Prot
Match: MPK17_ARATH (Mitogen-activated protein kinase 17 OS=Arabidopsis thaliana GN=MPK17 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.442e-11
Identity = 39/123 (31.71%), Postives = 64/123 (52.03%), Query Frame = 1
Query:  406 YMAERVVGTGSFGVVFQAKCLETGDSVAIKNVLXG*RYKN------RELQIMRLLNHPNVVSLKHCFFSTTEKDELYLNPVLEYISETVYRVS*HYTRMNXHVPILYVQLYTYQICRALKLLH 756
            Y  + VVG GS+GVV  A+C  TG  VAIK +     + +      RE++++RLL HP++V +KH       K+   +  V E +   ++    H  ++N  +   + Q + YQ+ R LK +H
Sbjct:   16 YQIQEVVGKGSYGVVASAECPHTGGKVAIKKMTNVFEHVSDAIRILREIKLLRLLRHPDIVEIKHIMLPPCRKEFKDIYVVFELMESDLH----HVLKVNDDLTPQHHQFFLYQLLRGLKFMH 134          
The following BLAST results are available for this feature:
BLAST of EY659278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
MDS1_YEAST4.631e-2436.59Serine/threonine-protein kinase MDS1/RIM11 OS=Sacc... [more]
MCK1_YEAST3.105e-1432.03Protein kinase MCK1 OS=Saccharomyces cerevisiae GN... [more]
MPK17_ARATH3.442e-1131.71Mitogen-activated protein kinase 17 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-D03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659278 ID=EY659278; Name=EY659278; organism=Citrus sinensis; type=EST; length=919bp
ATGCGCCGTCTCAATAGCATTGCTTCTGGTCGCACTTCTATTTCTTCTGA
TCCGGGTGGAGATTCTGGCATAAAGAGGGCAAAGGTCGATAAAGAATTAG
AGGTAAATGGGGAAGCAAATTTGGTTGAAAGAAGTGCCTCCAGTCTAGAG
CAGCATATGGCTTCTACATCTCTGGAGCCTGTTGCAAGCACGTCCGAAGC
AGCCACAGTTGCTAGAACTGAAAGATCAGGTTTTGATCAACTGCCTAAGG
AAATGAATGAGATGAGAATAAGAGATGAAAAAAATGTTAACCATGATGAT
AAGGATTTGGAACCCTCAATTGTCAATGGCAATGGAACAGAAGCAGGTCA
AGTCATTGCTACTACAGTAGGTGGTCGAAATGGACAACCAAAGCAGACAA
TCTCCTATATGGCAGAACGTGTGGTGGGGACTGGTTCCTTTGGTGTTGTC
TTCCAAGCTAAGTGCCTTGAAACAGGGGACTCTGTTGCAATAAAGAATGT
GCTCCNAGGATAGAGATACAAGAATAGGGAACTCCAAATTATGCGTTTAC
TTAACCATCCTAATGTTGTTTCTCTGAAACATTGTTTCTTTTCAACTACT
GAGAAAGATGAGCTTTATCTTAACCCTGTCTTGGAGTATATATCTGAAAC
TGTCTACCGAGTTTCATAGCACTATACCAGAATGAACCANCATGTGCCCA
TTCTTTACGTGCAGCTGTATACATACCAGATTTGCCGTGCACTGAAATTA
CTGCATCATGTTGGTGGGGGTGGGTCATTCGAGACTTTAGCCACAAAATT
TATTGGTCATCCCCATACACACCAGTTAAAGAATGTGACTTTTGAAGTGC
CAAAATGTTTGTGCCAAGTGAACCCAACCTAACGGTATCTGGTCAGAATT
ACAAGCCCCCGGACTTATA
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