EY659276

Overview
NameEY659276
Unique NameEY659276
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length927
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659276 vs. ExPASy Swiss-Prot
Match: PAT11_SOLTU (Patatin-11 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 3.243e-41
Identity = 96/227 (42.29%), Postives = 132/227 (58.15%), Query Frame = 1
Query:   28 VVLYKIMITNT---IAKGKKIAVLSIDGGGVRGIIPGTILAFLESQLQDLDG-PKARIADYFDIVSGTSTGGLIATMLTAPDKDRRPIFAAKDINKFYFKHCPEIFPQDSCKNFPRSVTSPLRKWVRPMYDGKYMRTLTNRILGEITIKDTLTNLIIPTFDVKRA*PVIFSPNDGKIHALKNARLADMCIGTFGASTYLPAHWFVTKDSITGDTCGFDLNDGGVAAM 696
            V+++ I+ T +      G+ + VLS DGGG++GIIPG I  FLE QLQ +D    AR+ADYFD++ GTSTGGL+  M+T P+++ RP  AAKDI  FYF+H P IF             S   ++  P YDGKY+  +    LGE  +   LT + I +FD+K   PVIF+ ++       +A++ D+C  T  A  Y P H FVT  S  G T  F+L DGGVA +
Sbjct:    9 VLIFMILATTSSTFATLGEMVTVLSTDGGGIKGIIPGIIPEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFQHGPHIF------------NSSTGQFFGPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHHFVTHTS-NGATYEFNLVDGGVATV 222          
BLAST of EY659276 vs. ExPASy Swiss-Prot
Match: PAT12_SOLTU (Patatin-12 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 4.235e-41
Identity = 94/229 (41.05%), Postives = 134/229 (58.52%), Query Frame = 1
Query:   25 FVVLYKIMITNTIAK----GKKIAVLSIDGGGVRGIIPGTILAFLESQLQDLDG-PKARIADYFDIVSGTSTGGLIATMLTAPDKDRRPIFAAKDINKFYFKHCPEIFPQDSCKNFPRSVTSPLRKWVRPMYDGKYMRTLTNRILGEITIKDTLTNLIIPTFDVKRA*PVIFSPNDGKIHALKNARLADMCIGTFGASTYLPAHWFVTKDSITGDTCGFDLNDGGVAAM 696
            F++L  +++  T +      + + VLSIDGGG++GIIPGTIL FL  QLQ +D    AR+ADYFD++ GTSTGGL+  M+T P+++ RP  AA +I  FYF+H P IF             S   ++  P YDGKY+  +    LGE  +   LT + I +FD+K   PVIF+ ++       +A++ D+C  T  A  Y P H+F+T  S  GD   F+L DGGVA +
Sbjct:    7 FLILIVMILATTSSTFASLEEMVTVLSIDGGGIKGIIPGTILEFLGGQLQKMDNNADARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAANEIVPFYFEHGPHIF------------NSSTGQFFGPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHYFITHTS-NGDIYEFNLVDGGVATV 222          
BLAST of EY659276 vs. ExPASy Swiss-Prot
Match: PATD3_SOLTU (Patatin group D-3 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 5.531e-41
Identity = 93/229 (40.61%), Postives = 136/229 (59.39%), Query Frame = 1
Query:   25 FVVLYKIMITNTIAK----GKKIAVLSIDGGGVRGIIPGTILAFLESQLQDLDG-PKARIADYFDIVSGTSTGGLIATMLTAPDKDRRPIFAAKDINKFYFKHCPEIFPQDSCKNFPRSVTSPLRKWVRPMYDGKYMRTLTNRILGEITIKDTLTNLIIPTFDVKRA*PVIFSPNDGKIHALKNARLADMCIGTFGASTYLPAHWFVTKDSITGDTCGFDLNDGGVAAM 696
            F++L  +++  T +      + + VLSIDGGG++GIIPGTIL FLE QLQ +D    AR+ADYFD++ GTSTGGL+ +M+T P+++ RP  AA +I  F+F+H P IF             S   ++  P YDGKY+  +    LGE  +   LT + I + D+K   PVIF+ ++       +A++ D+C  T  A TY P H+F T ++I GD   F+L DG VA +
Sbjct:    7 FLILIVMILATTSSTFASLEEMVTVLSIDGGGIKGIIPGTILEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTSMITTPNENNRPFAAANEIVPFFFEHGPHIF------------NSSTGQFFGPKYDGKYLMQVLQENLGETRVHQALTEVAISSLDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPTYFPPHYFTT-NTINGDKYEFNLVDGAVATV 222          
BLAST of EY659276 vs. ExPASy Swiss-Prot
Match: PAT16_SOLTU (Patatin-16 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.232e-40
Identity = 93/229 (40.61%), Postives = 135/229 (58.95%), Query Frame = 1
Query:   25 FVVLYKIMITNTIAK----GKKIAVLSIDGGGVRGIIPGTILAFLESQLQDLDG-PKARIADYFDIVSGTSTGGLIATMLTAPDKDRRPIFAAKDINKFYFKHCPEIFPQDSCKNFPRSVTSPLRKWVRPMYDGKYMRTLTNRILGEITIKDTLTNLIIPTFDVKRA*PVIFSPNDGKIHALKNARLADMCIGTFGASTYLPAHWFVTKDSITGDTCGFDLNDGGVAAM 696
            F++L  +++  T +      + + VLSIDGGG++GIIPGTIL FLE QLQ +D    AR+ADYFD++ GTSTGGL+  M+T P+++ RP  AA +I  FYF+H P IF   + + F +             YDGKY+  +    LGE  +   LT + I +FD+K   PVIF+ ++       +A++ D+C  T  A TY P H+F T ++I GD    +L DG VA +
Sbjct:    7 FLILIVMILATTSSTFASLEEMVTVLSIDGGGIKGIIPGTILEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAANEIVPFYFEHGPHIFNSSTGQFFRK-------------YDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPTYFPPHYFAT-NTINGDKYELNLVDGAVATV 221          
The following BLAST results are available for this feature:
BLAST of EY659276 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
PAT11_SOLTU3.243e-4142.29Patatin-11 OS=Solanum tuberosum PE=2 SV=1[more]
PAT12_SOLTU4.235e-4141.05Patatin-12 OS=Solanum tuberosum PE=2 SV=1[more]
PATD3_SOLTU5.531e-4140.61Patatin group D-3 OS=Solanum tuberosum PE=2 SV=1[more]
PAT16_SOLTU1.232e-4040.61Patatin-16 OS=Solanum tuberosum PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-D01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659276 ID=EY659276; Name=EY659276; organism=Citrus sinensis; type=EST; length=927bp
CTTTCTTTTATATGCCTAGCACCATTTGTGGTCTTATACAAAATCATGAT
TACTAATACCATCGCCAAAGGCAAGAAAATAGCCGTGCTGAGCATTGATG
GCGGCGGCGTTAGGGGCATCATTCCTGGCACTATTTTGGCCTTTCTTGAA
TCCCAGCTTCAGGATCTGGACGGACCCAAGGCGAGAATTGCAGATTATTT
CGATATAGTTTCAGGAACAAGCACAGGTGGGCTAATAGCCACCATGCTTA
CAGCCCCCGACAAGGACCGCAGACCTATTTTTGCTGCAAAGGATATCAAC
AAATTTTATTTTAAGCACTGTCCTGAAATTTTCCCTCAAGATAGCTGTAA
GAATTTTCCAAGATCAGTTACAAGCCCTTTGCGTAAGTGGGTACGACCAA
TGTACGATGGGAAGTACATGCGGACTCTTACGAACAGGATACTAGGAGAA
ATTACCATCAAAGATACCCTAACAAATTTGATCATTCCAACTTTTGACGT
CAAGCGGGCTTAGCCAGTGATATTCTCACCCAATGATGGAAAAATACATG
CTTTGAAGAATGCCCGGCTTGCTGATATGTGCATTGGCACCTTTGGAGCT
TCCACCTACTTACCAGCGCACTGGTTTGTGACCAAAGATTCAATTACCGG
CGACACATGTGGGTTTGATCTCAATGATGGGGGGGTTGCGGCAATGACCC
CGTAAGTAACTTCATTTTTGGAACCTGGGGGCCATATCTGGGGATTGACA
ATAAATTATTGGGGGATTTGGAATATATGAGGGAAAGATAATGAATGTGT
TAACCCTTAGGGCCCTAACCCGCTTTTGCTGGAGGGTTTAAACATAAGCC
TGGGTCGATGCTTAAACCATTTACACCGGGGAACCTACTCTTGGCCTAGG
GCAGGGGCGGCCAGGGACCACCATTCC
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