EY659272
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659272 vs. ExPASy Swiss-Prot
Match: BLM_CAEEL (Bloom syndrome protein homolog OS=Caenorhabditis elegans GN=him-6 PE=2 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 9.626e-17 Identity = 45/119 (37.82%), Postives = 71/119 (59.66%), Query Frame = 1 Query: 415 NENLGRLLRLVYGYDSFRDGQLEAIKMVLDKKSTMLVLPTGAGKSLCYQIPAMILPGLTLVVCPLVALMIDQLRHLPPVIHGGFLSSSQRPEEVAETIRLIQVG----AIKVLFVSPER 759 N+ L L+ +G++ FR Q + I L T +++PTGAGKSLCYQ+PA+ILPG+T+VV PL +L+ DQ + + G ++ E I ++G +IK+L+V+PE+ Sbjct: 232 NKELYDTLKSKFGFNQFRHRQKQCILSTLMGHDTFVLMPTGAGKSLCYQLPAVILPGVTVVVSPLRSLIEDQKMKMKELGIGCEALTADLGAPAQEKI-YAELGSGNPSIKLLYVTPEK 349 HSP 2 Score: 33.8834 bits (76), Expect = 9.626e-17 Identity = 12/17 (70.59%), Postives = 14/17 (82.35%), Query Frame = 2 Query: 821 DEAHCVSEWAHNFPPLY 871 DEAHCVS+W H+F P Y Sbjct: 375 DEAHCVSQWGHDFRPDY 391
BLAST of EY659272 vs. ExPASy Swiss-Prot
Match: BLM_HUMAN (Bloom syndrome protein OS=Homo sapiens GN=BLM PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.098e-16 Identity = 40/107 (37.38%), Postives = 66/107 (61.68%), Query Frame = 1 Query: 448 YGYDSFRDGQLEAIKMVLDKKSTMLVLPTGAGKSLCYQIPAMILPGLTLVVCPLVALMIDQLRHLPPV-IHGGFLSSSQRPEEVAETIRLI--QVGAIKVLFVSPER 759 +G +FR QLEAI L + +++PTG GKSLCYQ+PA + PG+T+V+ PL +L++DQ++ L + I +L+ + E + + IK+L+V+PE+ Sbjct: 663 FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTVVISPLRSLIVDQVQKLTSLDIPATYLTGDKTDSEATNIYLQLSKKDPIIKLLYVTPEK 769 HSP 2 Score: 31.187 bits (69), Expect = 2.098e-16 Identity = 12/26 (46.15%), Postives = 18/26 (69.23%), Query Frame = 2 Query: 782 NIYCYFIISLVGGDEAHCVSEWAHNF 859 N+Y +++ DEAHCVS+W H+F Sbjct: 782 NLYERKLLARFVIDEAHCVSQWGHDF 807
BLAST of EY659272 vs. ExPASy Swiss-Prot
Match: WRN_HUMAN (Werner syndrome ATP-dependent helicase OS=Homo sapiens GN=WRN PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.543e-16 Identity = 51/161 (31.68%), Postives = 86/161 (53.42%), Query Frame = 1 Query: 280 TESKGAEDEYGLIIENLEQNQKNRRAAGELELVEDAVRAVKDEASNENLGRLLRLVYGYDSFRDGQLEAIKMVLD-KKSTMLVLPTGAGKSLCYQIPAMILPGLTLVVCPLVALMIDQLRHLP-PVIHGGFLSSSQRPEEVAETIRLIQVGAIKVLFVSPE 756 T SK + E L + E+ + + A E E ED + A NE L++ +G+ SF+ Q + I VL+ ++ + V+ TG GKSLC+Q P + + + LV+ PL++LM DQ+ L I FL S+Q + + I++G ++++V+PE Sbjct: 490 THSKCLKMERNLGLPTKEEEEDDENEANEGE--EDDDKDFLWPAPNEEQVTCLKMYFGHSSFKPVQWKVIHSVLEERRDNVAVMATGYGKSLCFQYPPVYVGKIGLVISPLISLMEDQVLQLKMSNIPACFLGSAQSENVLTD----IKLGKYRIVYVTPE 644 HSP 2 Score: 35.039 bits (79), Expect = 3.543e-16 Identity = 12/19 (63.16%), Postives = 16/19 (84.21%), Query Frame = 2 Query: 803 ISLVGGDEAHCVSEWAHNF 859 I+L+ DEAHC+SEW H+F Sbjct: 662 ITLIAVDEAHCISEWGHDF 680
BLAST of EY659272 vs. ExPASy Swiss-Prot
Match: RECQ1_CAEEL (Putative ATP-dependent DNA helicase Q1 OS=Caenorhabditis elegans GN=tag-51 PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 3.781e-15 Identity = 52/183 (28.42%), Postives = 91/183 (49.73%), Query Frame = 1 Query: 265 LNKNETESKGAEDEYGLIIENLEQ-NQKNRRAAGELELVEDAVRAVKDEASN--------------ENLGRLLRLVYGYDSFRDGQLEAIKMVLDKKSTMLVLPTGAGKSLCYQIPAMILPGLTLVVCPLVALMIDQLRHLPPV-IHGGFLSSSQRPEEVAETIRLI--QVGAIKVLFVSPER 759 L+K TE + E G I + + Q +K + + +E + +E S+ + ++L+ + + FR Q AI V+ K+ +++L TG GKSLCYQ+PA++ GL LVV PL++L+ DQ+ L + I L+++ EE I + ++L+V+PE+ Sbjct: 408 LSKLSTELADLDGEIGQIDQQISQLRRKKSELTQKRQAIERKIELKTNEDSDVVTDRWDRDGFPWSDEATKILKEQFHLEKFRPLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALLANGLALVVSPLISLVEDQILQLRSLGIDSSSLNANTSKEEAKRVEDAITNKDSKFRLLYVTPEK 590 HSP 2 Score: 29.261 bits (64), Expect = 3.781e-15 Identity = 9/19 (47.37%), Postives = 13/19 (68.42%), Query Frame = 2 Query: 803 ISLVGGDEAHCVSEWAHNF 859 + L+ DE HC S+W H+F Sbjct: 610 LKLIAIDEVHCCSQWGHDF 628
BLAST of EY659272 vs. ExPASy Swiss-Prot
Match: WRN_XENLA (Werner syndrome ATP-dependent helicase homolog OS=Xenopus laevis GN=wrn PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 6.317e-15 Identity = 36/109 (33.03%), Postives = 66/109 (60.55%), Query Frame = 1 Query: 436 LRLVYGYDSFRDGQLEAIKMVL-DKKSTMLVLPTGAGKSLCYQIPAMILPGLTLVVCPLVALMIDQLRHLP-PVIHGGFLSSSQRPEEVAETIRLIQVGAIKVLFVSPE 756 L+ +G+ SF+ Q + + VL +++ ++V+ TG GKSLCYQ + G+ +V+CPL++LM DQ+ L I FL S+Q + + ++ G ++V++++PE Sbjct: 481 LKTYFGHSSFKPVQWKVVHSVLRERRDNLVVMATGYGKSLCYQFAPVYTSGIGIVICPLISLMEDQVLQLEMSNISSCFLGSAQSKNVLQD----VKDGKMRVIYMTPE 585 HSP 2 Score: 35.8094 bits (81), Expect = 6.317e-15 Identity = 13/23 (56.52%), Postives = 17/23 (73.91%), Query Frame = 2 Query: 803 ISLVGGDEAHCVSEWAHNFPPLY 871 I+L+ DEAHC+SEW H+F Y Sbjct: 603 ITLIAIDEAHCISEWGHDFRSAY 625
BLAST of EY659272 vs. ExPASy Swiss-Prot
Match: YR290_MIMIV (Putative ATP-dependent RNA helicase R290 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R290 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.416e-14 Identity = 42/113 (37.17%), Postives = 65/113 (57.52%), Query Frame = 1 Query: 418 ENLGRLLRLVYGYDSFRDGQLEAIKMVLDKKSTMLVLPTGAGKSLCYQIPAMILPGLTLVVCPLVALMIDQLRHLPPVIHGGFLSSSQRPEEVAETIRLIQVGAIKVLFVSPE 756 + L +LL++VYGYD+FR Q E I V++ + +L T AGKSLC+QIPA+ L +++ PL++LM DQ R + + + E A+ + I K ++VSPE Sbjct: 15 KKLKKLLKMVYGYDNFRPRQYEIINKVINGEDVCAILMTSAGKSLCFQIPALYLDKPAIIISPLISLMEDQ-RLILEKLGISSCCYNSNVENKAQMRKDIMQFKYKFIYVSPE 126 HSP 2 Score: 27.7202 bits (60), Expect = 1.416e-14 Identity = 11/23 (47.83%), Postives = 15/23 (65.22%), Query Frame = 2 Query: 803 ISLVGGDEAHCVSEWAHNFPPLY 871 ISL+ DEAHC+S + +F Y Sbjct: 144 ISLIAIDEAHCISAYGFDFRTAY 166
BLAST of EY659272 vs. ExPASy Swiss-Prot
Match: WRN_MOUSE (Werner syndrome ATP-dependent helicase homolog OS=Mus musculus GN=Wrn PE=1 SV=2) HSP 1 Score: 58.9214 bits (141), Expect = 1.531e-12 Identity = 33/108 (30.56%), Postives = 62/108 (57.41%), Query Frame = 1 Query: 436 LRLVYGYDSFRDGQLEAIKMVLD-KKSTMLVLPTGAGKSLCYQIPAMILPGLTLVVCPLVALMIDQLRHLPPVIHGGFLSSSQRPEEVAETIRLIQVGAIKVLFVSPE 756 L+ +G+ SF+ Q + I VL+ ++ ++V+ TG GKSLC+Q P + + +V+ PL++LM DQ+ L L S + + + ++L G +V++++PE Sbjct: 504 LKTYFGHSSFKPVQWKVIHSVLEERRDNVVVMATGYGKSLCFQYPPVYTGKIGIVISPLISLMEDQVLQLELSNVPACLLGSAQSKNILGDVKL---GKYRVIYITPE 608 HSP 2 Score: 35.039 bits (79), Expect = 1.531e-12 Identity = 12/19 (63.16%), Postives = 16/19 (84.21%), Query Frame = 2 Query: 803 ISLVGGDEAHCVSEWAHNF 859 I+L+ DEAHC+SEW H+F Sbjct: 626 ITLIAVDEAHCISEWGHDF 644 The following BLAST results are available for this feature:
BLAST of EY659272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659272 ID=EY659272; Name=EY659272; organism=Citrus sinensis; type=EST; length=924bpback to top |