EY659269

Overview
NameEY659269
Unique NameEY659269
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_SALPA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Salmonella paratyphi A GN=gpmI PE=3 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 2.208e-21
Identity = 75/193 (38.86%), Postives = 106/193 (54.92%), Query Frame = 1
Query:    7 VRADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGE 579
            + A TP MD+     P    L+ A G  VGLP +  MGNSEVGH  LGAGRI  Q    +D+ +     + +    N +  +   G  +H++GLLS GGVHS  D +  +++ A+ERGA++I LH   DGRD    S+   ++  E   A L GKG   ++AS  GR Y  MDR +N WD V++ +D   L +
Sbjct:   28 LNAKTPVMDALWAKRPHT--LIDASGLEVGLP-DRQMGNSEVGHVNLGAGRIVYQDLTRLDVEIKERTFFANPVLTNAVDQAKNAGKAVHIMGLLSAGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPRSAEASLKKFEDKFAAL-GKG---RVASIVGR-YYAMDR-DNRWDRVEKAYDLMTLAQ 211          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_PSEPG (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas putida (strain GB-1) GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.208e-21
Identity = 73/180 (40.56%), Postives = 100/180 (55.56%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYI--KPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVV 546
            A+TP  D    + P    L+   G  VGLP +  MGNSEVGH  LGAGR+  Q    V  A+  G+ +++        K +     +H++GLLSDGGVHS  D L  + + A++RGA++I LH   DGRD    S+   +E ++   A+L GKG   +IAS  GR Y  MDR +N WD V
Sbjct:   30 ANTPVYDRLRATLPHG--LISGSGMDVGLP-DGQMGNSEVGHMNLGAGRVVYQDFTRVTKAIRDGEFFKNPVLTGAVDKAASAGKAVHILGLLSDGGVHSHQDHLVAMAELAAQRGAEKIYLHAFLDGRDTPPRSAQSSIELLDATFAKL-GKG---RIASLIGR-YYAMDR-DNRWDRV 200          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_PSEE4 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas entomophila (strain L48) GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.208e-21
Identity = 73/180 (40.56%), Postives = 100/180 (55.56%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYI--KPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVV 546
            A+TP  D    + P    L+   G  VGLP +  MGNSEVGH  LGAGR+  Q    V  A+  G+ +++        K +     +H++GLLSDGGVHS  D L  + + A++RGA++I LH   DGRD    S+   +E ++   A+L GKG   +IAS  GR Y  MDR +N WD V
Sbjct:   30 ANTPVYDRLRATQPHG--LISGSGMDVGLP-DGQMGNSEVGHMNLGAGRVVYQDFTRVTKAIRDGEFFENPVLTGAVDKAASAGKAVHILGLLSDGGVHSHQDHLIAMAELAAQRGAEKIYLHAFLDGRDTPPRSAQSSIELLDATFAKL-GKG---RIASLIGR-YYAMDR-DNRWDRV 200          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_DINSH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Dinoroseobacter shibae (strain DFL 12) GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.208e-21
Identity = 74/198 (37.37%), Postives = 100/198 (50.51%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFET--GTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTA 600
            ADTP MD    + P     L   G  VGLP+   MGNSEVGH  +GAGR+ A     +DLA+  G   ++          ++  GT HL+G+ SDGGVH   D +    K  +  G   + LH +TDGRDV   S+  F+  +E  L E       A+I +  GR Y  MDR +N WD V R + A V  +  T+ +A
Sbjct:   29 ADTPVMDRLMATCPNA--TLTTFGPDVGLPS-GQMGNSEVGHTNIGAGRVVAMDLGQIDLAIEDGSFARNPALTGFIDRLKSSGGTAHLMGVASDGGVHGHTDHIIAAAKAVAGAGVP-VVLHAITDGRDVAPKSADRFMPALEAALPE------GARIGTVIGR-YYAMDR-DNRWDRVARAFVAMVRAQGETAESA 214          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_PSEA6 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=gpmI PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.884e-21
Identity = 76/205 (37.07%), Postives = 107/205 (52.20%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF--NYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTAPLKLSKN 621
            A TP +D   K       L+ A G  VGLP    MGNSEVGH  LGAGR+  Q    V  A+  G  +++E    N  K   +   +H++GLLS GGVHS  D +  ++K A++RGAK+I LH   DGRD    S+   +E  +K   EL G G  A +    GR Y  MDR ++ WD V++ +     GE   ++   ++  +N
Sbjct:   30 AKTPVLDRLTKETTNT--LISASGMDVGLPG-GQMGNSEVGHVNLGAGRVVYQDFTRVTKAIEDGDFFENEVLVSNVDKAIKQDKAVHIMGLLSPGGVHSHQDHIFAMIKLAAKRGAKKIFLHAFLDGRDTPPRSAKAPLEAADKVFEEL-GVGKTATLV---GR-YYAMDR-DSRWDRVEKAYKVIAKGEGAFNVACAIEGLEN 225          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_CYAP4 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=gpmI PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.766e-21
Identity = 74/182 (40.66%), Postives = 95/182 (52.20%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSF-ETGT-LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR 552
            A TP MDS  ++ P    L+   G AVGLP +  MGNSEVGH  LGAGRI  Q    +  A   G +  +     +     + GT LHL+GL SDGGVHS LD L  LL  A   G  ++ +H +TDGRD L      F++ ++  L  L       QI +  GR Y  MDR +  WD V+R
Sbjct:   31 AHTPVMDSLWQAYPHT--LVYTSGKAVGLP-KGQMGNSEVGHLNLGAGRIVPQELVRISDAAEDGSLAANPALVQVYEGVKQRGTKLHLVGLCSDGGVHSHLDHLLALLDMAKSLGVTQVCVHAITDGRDTLPTEGKTFIQRLQDHLDRLE----MGQIVTLSGR-YYAMDR-DRRWDRVER 203          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_SYNPX (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Synechococcus sp. (strain WH8102) GN=gpmI PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.919e-21
Identity = 69/186 (37.10%), Postives = 104/186 (55.91%), Query Frame = 1
Query:   10 RADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFE--TGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WD 561
            + DTP M++   + P    L++A GS VGLP +  MGNSEVGH  +GAGRI  Q    +   +   ++        +    +  TGTLHL+GL SDGGVHS ++ L  L+  A+  G K++ +H +TDGRD    S++G +  +++ + E    GV   +AS  GR Y  MDR +  WD  ++ +D
Sbjct:   39 QGDTPVMEALWHAYPHA--LIQASGSHVGLP-DHQMGNSEVGHLTIGAGRIIRQELVRISDTVRDDQLNNTPALVELAEHLQNDTGTLHLLGLCSDGGVHSHVNHLCGLIHWAAAAGIKKVAVHAITDGRDTPTQSAMGSITLVQRAMEE---AGV-GHLASLCGR-YWAMDR-DKRWDRTEKAYD 215          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_SALCH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Salmonella choleraesuis GN=gpmI PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.919e-21
Identity = 74/193 (38.34%), Postives = 106/193 (54.92%), Query Frame = 1
Query:    7 VRADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGE 579
            + A TP MD+     P    L+ A G  VGLP +  MGNSEVGH  LGAGRI  Q    +D+ +     + +    N +  +   G  +H++GLLS GGVHS  D +  +++ A+ERGA++I LH   DGRD    S+   ++  E   A  +GKG   ++AS  GR Y  MDR +N WD V++ +D   L +
Sbjct:   28 LNAKTPVMDALWAKRPHT--LIDASGLEVGLP-DRQMGNSEVGHVNLGAGRIVYQDLTRLDVEIKERTFFANPVLTNAVDQAKNAGKAVHIMGLLSAGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPRSAEASLKKFEDKFA-AQGKG---RVASIVGR-YYAMDR-DNRWDRVEKAYDLMTLAQ 211          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_MYCH7 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mycoplasma hyopneumoniae (strain 7448) GN=gpmI PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.919e-21
Identity = 75/200 (37.50%), Postives = 111/200 (55.50%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNY-IKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTAPL 606
            A TP  D   +  P    L+ A G  VGLP E  MGNSEVGH  +GAG +   G  +++ AL +GK +++E F    + S +TG  L ++GL S GGVHS  D L  L+  A+  G K++ LH+  DGRDV   S   +++ +   L        + +IAS  GR Y +MDR +  +D V+  ++A +LG+A  + T P+
Sbjct:   27 AKTPVFDRLFQEYPNS--LIAASGQEVGLP-EGQMGNSEVGHLNIGAGFVVYTGISIINNALKTGKFFENEKFILAFRHSIKTGFPLQIMGLFSPGGVHSHQDHLFALIDFAANFGVKKLNLHLFGDGRDVGPKSIKPWIKMLNLKLKNYE----NYKIASISGRFY-SMDR-DKMFDRVELGYNA-LLGKAENTFTDPI 216          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_MYCH2 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mycoplasma hyopneumoniae (strain 232) GN=gpmI PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.919e-21
Identity = 75/200 (37.50%), Postives = 111/200 (55.50%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNY-IKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTAPL 606
            A TP  D   +  P    L+ A G  VGLP E  MGNSEVGH  +GAG +   G  +++ AL +GK +++E F    + S +TG  L ++GL S GGVHS  D L  L+  A+  G K++ LH+  DGRDV   S   +++ +   L        + +IAS  GR Y +MDR +  +D V+  ++A +LG+A  + T P+
Sbjct:   34 AKTPVFDRLFQEYPNS--LIAASGQEVGLP-EGQMGNSEVGHLNIGAGFVVYTGISIINNALKTGKFFENEKFILAFRHSIKTGFPLQIMGLFSPGGVHSHQDHLFALIDFAANFGVKKLNLHLFGDGRDVGPKSIKPWIKMLNLKLKNYE----NYKIASISGRFY-SMDR-DKMFDRVELGYNA-LLGKAENTFTDPI 223          
The following BLAST results are available for this feature:
BLAST of EY659269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 272
Match NameE-valueIdentityDescription
GPMI_SALPA2.208e-2138.862,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEPG2.208e-2140.562,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEE42.208e-2140.562,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_DINSH2.208e-2137.372,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEA62.884e-2137.072,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CYAP43.766e-2140.662,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SYNPX4.919e-2137.102,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SALCH4.919e-2138.342,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_MYCH74.919e-2137.502,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_MYCH24.919e-2137.502,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659269 ID=EY659269; Name=EY659269; organism=Citrus sinensis; type=EST; length=934bp
CCACGCGTCCGCGCCGACACTCCCACCATGGACTCTTTCAATAAGTCTGC
CCCTGGGAGGTGGAGGTTGCTCCGAGCTCACGGTAGTGCTGTGGGGCTTC
CAACTGAAGATGACATGGGTAACAGTGAAGTCGGTCATAATGCACTCGGT
GCTGGTCGCATTTTTGCTCAAGGTGCAAAGCTTGTTGACCTTGCTCTGGC
CTCTGGGAAAATCTATCAAGATGAGGGATTTAATTACATTAAGCCATCTT
TTGAAACCGGCACATTGCACCTTATTGGGTTACTGAGTGATGGTGGAGTA
CACTCTAGGCTTGATCAACTTCAGTTGTTGCTAAAAGGAGCTAGTGAGCG
TGGTGCTAAAAGAATTCGTCTTCATATTCTTACTGACGGGCGTGATGTTT
TGGATGGTTCAAGCGTAGGATTCGTAGAAACTATTGAGAAAGATCTTGCA
GAATTGCGTGGGAAAGGTGTTGACGCGCAGATTGCATCTGGAGGAGGCCG
CATGTACGTCACGATGGACCGTTATGAGAATGATTGGGATGTTGTCAAAC
GATGATGGGATGCCCAAGTTCTTGGAGAAGCTCACACAAGTTTAACAGCG
CCGTTGAAGCTGTCAAAAAACTAAGGGAACAGCCCAATGCCAATGACCAG
TACTTACCTNCATTTGTCATTGTTGATGAAAATGGAAAAGCTGTGGGTCC
AATAGTANATGGTGATGCNAGTGTAACTTTCAACTTCGAGCTGATCGAAT
GGTATGCTTGCTAAGCCCCTGATATGAAGATTTGACAATTGGATCCGAGT
CGGGTCCCTAAATNCGTATGCTGGATGCTCATATGATGGGGGAGTGAAAC
TCCAGTCATACCNTGNNGTCTCTCGAGATGACAGACTCTGGGAATATTAT
GCATAATGGGGTCCGACTTTGCTGCANGAGATGT
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