EY659269

Overview
NameEY659269
Unique NameEY659269
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_LARHH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Laribacter hongkongensis (strain HLHK9) GN=gpmI PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.441e-20
Identity = 69/190 (36.32%), Postives = 99/190 (52.11%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEA 582
            A TP  D   +  P  +  + A   AVGLP     GNSEVGH  +GAGRI  Q    +DL L   +   +  F +   +     LH++GLLSDGGVHS  + +  L++ A   G   IR+H   DGRD    S+  ++E ++  LAE      +A++A+  GR Y  MDR +  W+ V++ +   V GEA
Sbjct:   29 ARTPNWDRLRRDHP--YGTIDASERAVGLP-RGQFGNSEVGHLNIGAGRIVTQDISRIDLDLEEQRFAGNPAFTHAFAAARGHALHILGLLSDGGVHSHENHIHALIRAAQAAGVADIRVHAFLDGRDTPPRSARTYLERLDAVLAEC----PNARLATVCGR-YFAMDR-DKRWERVEQAYRLIVDGEA 209          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_SYNP6 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=gpmI PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.188e-20
Identity = 73/182 (40.11%), Postives = 98/182 (53.85%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFET--GTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR 552
            A+TP MD+  ++ P    L+   G  VGLP +  MGNSEVGH  LGAGRI  Q    +  A+  G I ++        +       LHLIGL SDGGVH+ LD L  LLK A+ +G + + +H +TDGRD      V  +  IE+ +A     GV  QI +  GR Y  MDR +  WD V++
Sbjct:   31 AETPIMDALWEAYPST--LIHTSGKDVGLP-DGQMGNSEVGHLNLGAGRIVPQELVRITDAVEDGSILENPALLQACSAVRQHGSKLHLIGLCSDGGVHAHLDHLGGLLKLAAAQGIQDVYIHAITDGRDTNPTEGVNCITKIERLIAT---AGV-GQIVTICGR-YFAMDR-DRRWDRVRK 203          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_SYNJB (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Synechococcus sp. GN=gpmI PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.188e-20
Identity = 72/178 (40.45%), Postives = 96/178 (53.93%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFET--GTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWD 540
            A+TP +DS   + P    LL+A G AVGLP    MGNSEVGH  LGAGR+  Q    +  A+ +G ++QD     +        G  H +GL S+GGVHS +D L  LLK A++       +H +TDGRD L       +  +EK+L  L G GV   IA+  GR Y  MDR +  W+
Sbjct:   31 AETPVLDSLWAAYPHT--LLQASGRAVGLPA-GQMGNSEVGHLTLGAGRVVPQELVRISDAIETGSLFQDPLLMQVCRQLRERGGRFHFVGLCSEGGVHSHIDHLYGLLKLAAQAEIPAY-VHAITDGRDTLPRDGARVLAALEKELQWL-GNGV---IATLSGR-YYAMDR-DRRWE 198          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_SYNE7 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Synechococcus elongatus (strain PCC 7942) GN=gpmI PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.188e-20
Identity = 73/182 (40.11%), Postives = 98/182 (53.85%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFET--GTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR 552
            A+TP MD+  ++ P    L+   G  VGLP +  MGNSEVGH  LGAGRI  Q    +  A+  G I ++        +       LHLIGL SDGGVH+ LD L  LLK A+ +G + + +H +TDGRD      V  +  IE+ +A     GV  QI +  GR Y  MDR +  WD V++
Sbjct:   31 AETPIMDALWEAYPST--LIHTSGKDVGLP-DGQMGNSEVGHLNLGAGRIVPQELVRITDAVEDGSILENPALLQACSAVRQHGSKLHLIGLCSDGGVHAHLDHLGGLLKLAAAQGIQDVYIHAITDGRDTNPTEGVNCITKIERLIAT---AGV-GQIVTICGR-YFAMDR-DRRWDRVRK 203          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_SHEPA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=gpmI PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.188e-20
Identity = 75/199 (37.69%), Postives = 107/199 (53.77%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNY-IKPSFET-GTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEA-HTSLTA 600
            A+TP +D  N   P    L+   G  VGLP +  MGNSEVGH  +G+GRI  Q    +  A+  G+   +      I  + E  G +H++GLLS GGVHS  D ++ + + A +RGAK++ LH   DGRD    S+   +   E +L +  G G   Q+AS  GR Y  MDR +N WD V + ++    G++ H S TA
Sbjct:   30 ANTPVLDQLNAKYPNS--LISGSGIDVGLP-DGQMGNSEVGHINIGSGRIVYQELTRISKAIDDGEFDTNPALTKAIDDAIEVNGAVHIMGLLSPGGVHSHQDHIEAMCRLAVKRGAKKVYLHAFLDGRDTPPRSAKPGLAHFE-ELFKSLGTG---QVASVIGR-YYAMDR-DNRWDRVSQAYELITEGKSLHQSATA 219          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_PSEPK (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas putida (strain KT2440) GN=gpmI PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.188e-20
Identity = 72/180 (40.00%), Postives = 100/180 (55.56%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFN-YIKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVV 546
            A+ P  D    + P    L+   G  VGLP +  MGNSEVGH  LGAGR+  Q    V  A+  G+ +++      +  +   G  +H++GLLSDGGVHS  D L  + + A++RGA++I LH   DGRD    S+   +E ++   A+L GKG   +IAS  GR Y  MDR +N WD V
Sbjct:   30 ANKPVYDRLCATQPHG--LISGSGMDVGLP-DGQMGNSEVGHMNLGAGRVVYQDFTRVTKAIRDGEFFENPVLTGAVDKAVGAGKAVHILGLLSDGGVHSHQDHLVAMAELAAQRGAEKIYLHAFLDGRDTPPRSAQSSIELLDATFAKL-GKG---RIASLIGR-YYAMDR-DNRWDRV 200          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_STAS1 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=gpmI PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.164e-20
Identity = 68/188 (36.17%), Postives = 101/188 (53.72%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDE----GFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDA 564
            A+ P  D +    P     + A G  VGLP E  MGNSEVGH  +GAGR+  Q    ++ ++  G  ++++      N++K +     LH+ GLLSDGGVHS    L  LL  A ++G +++ +H   DGRDV   S++ ++E  E    EL   G+  Q AS  GR Y  MDR +  WD  ++ ++A
Sbjct:   28 ANKPNFDRYYSKYPTTQ--IEASGLDVGLP-EGQMGNSEVGHMNIGAGRVVYQSLTRINKSIEDGDFFENDVLNNAINHVKKN--DSVLHVFGLLSDGGVHSHYKHLFALLDLAKKQGLEKVYVHAFLDGRDVDQKSALKYIEETEAKFKEL---GI-GQFASVSGR-YYAMDR-DKRWDREEKAYNA 204          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_STAES (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gpmI PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.164e-20
Identity = 71/187 (37.97%), Postives = 102/187 (54.55%), Query Frame = 1
Query:   10 RADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNY-IKPSFETGT-LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDA 564
            +A  P  D + +  P     + A G  VGLP E  MGNSEVGH  +GAGRI  Q    ++ ++  G+ + +   N  +K   + G+ LH+ GLLSDGGVHS    L  +L+ A ++G  ++ +H   DGRDV   S++ ++E  E    EL   GV  Q AS  GR Y  MDR +  WD  +R ++A
Sbjct:   27 QAHKPNFDRYYEKYPTTQ--IEASGLDVGLP-EGQMGNSEVGHMNIGAGRIVYQSLTRINKSIEDGEFFDNTVLNNAVKHVKDNGSALHVFGLLSDGGVHSHYKHLFAILELAKKQGIDKVYVHAFLDGRDVDQKSALKYIEETEDKFKEL---GV-GQFASVSGR-YYAMDR-DKRWDREERAYNA 204          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_STAEQ (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gpmI PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.164e-20
Identity = 71/187 (37.97%), Postives = 102/187 (54.55%), Query Frame = 1
Query:   10 RADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNY-IKPSFETGT-LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDA 564
            +A  P  D + +  P     + A G  VGLP E  MGNSEVGH  +GAGRI  Q    ++ ++  G+ + +   N  +K   + G+ LH+ GLLSDGGVHS    L  +L+ A ++G  ++ +H   DGRDV   S++ ++E  E    EL   GV  Q AS  GR Y  MDR +  WD  +R ++A
Sbjct:   27 QAHKPNFDRYYEKYPTTQ--IEASGLDVGLP-EGQMGNSEVGHMNIGAGRIVYQSLTRINKSIEDGEFFDNTVLNNAVKHVKDNGSALHVFGLLSDGGVHSHYKHLFAILELAKKQGIDKVYVHAFLDGRDVDQKSALKYIEETEDKFKEL---GV-GQFASVSGR-YYAMDR-DKRWDREERAYNA 204          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_SERP5 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Serratia proteamaculans (strain 568) GN=gpmI PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.164e-20
Identity = 73/187 (39.04%), Postives = 102/187 (54.55%), Query Frame = 1
Query:    7 VRADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNY-IKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WD 561
            + A TP MD   +  P +  L+ A G  VGLP +  MGNSEVGH  LGAGRI  Q    +D  +  G  + +      +  + + G  +H++GLLS GGVHS  D +  +++ AS+RGAK + LH   DGRD    S+   ++      A+L G G   +IAS  GR Y  MDR +N WD V+  +D
Sbjct:   28 LNAKTPVMDRLWQQQPHQ--LIAASGLDVGLP-DGQMGNSEVGHVNLGAGRIVYQDLTRLDKEIKEGDFFANPTLTAAVDKAVQAGKAVHIMGLLSPGGVHSHEDHILAMIELASQRGAKAVYLHAFLDGRDTPPRSAEASLQRFSDAFAKL-GTG---RIASLIGR-YYAMDR-DNRWDRVQLAYD 205          
The following BLAST results are available for this feature:
BLAST of EY659269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 272
Match NameE-valueIdentityDescription
GPMI_LARHH2.441e-2036.322,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SYNP63.188e-2040.112,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SYNJB3.188e-2040.452,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SYNE73.188e-2040.112,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHEPA3.188e-2037.692,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEPK3.188e-2040.002,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_STAS14.164e-2036.172,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_STAES4.164e-2037.972,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_STAEQ4.164e-2037.972,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SERP54.164e-2039.042,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659269 ID=EY659269; Name=EY659269; organism=Citrus sinensis; type=EST; length=934bp
CCACGCGTCCGCGCCGACACTCCCACCATGGACTCTTTCAATAAGTCTGC
CCCTGGGAGGTGGAGGTTGCTCCGAGCTCACGGTAGTGCTGTGGGGCTTC
CAACTGAAGATGACATGGGTAACAGTGAAGTCGGTCATAATGCACTCGGT
GCTGGTCGCATTTTTGCTCAAGGTGCAAAGCTTGTTGACCTTGCTCTGGC
CTCTGGGAAAATCTATCAAGATGAGGGATTTAATTACATTAAGCCATCTT
TTGAAACCGGCACATTGCACCTTATTGGGTTACTGAGTGATGGTGGAGTA
CACTCTAGGCTTGATCAACTTCAGTTGTTGCTAAAAGGAGCTAGTGAGCG
TGGTGCTAAAAGAATTCGTCTTCATATTCTTACTGACGGGCGTGATGTTT
TGGATGGTTCAAGCGTAGGATTCGTAGAAACTATTGAGAAAGATCTTGCA
GAATTGCGTGGGAAAGGTGTTGACGCGCAGATTGCATCTGGAGGAGGCCG
CATGTACGTCACGATGGACCGTTATGAGAATGATTGGGATGTTGTCAAAC
GATGATGGGATGCCCAAGTTCTTGGAGAAGCTCACACAAGTTTAACAGCG
CCGTTGAAGCTGTCAAAAAACTAAGGGAACAGCCCAATGCCAATGACCAG
TACTTACCTNCATTTGTCATTGTTGATGAAAATGGAAAAGCTGTGGGTCC
AATAGTANATGGTGATGCNAGTGTAACTTTCAACTTCGAGCTGATCGAAT
GGTATGCTTGCTAAGCCCCTGATATGAAGATTTGACAATTGGATCCGAGT
CGGGTCCCTAAATNCGTATGCTGGATGCTCATATGATGGGGGAGTGAAAC
TCCAGTCATACCNTGNNGTCTCTCGAGATGACAGACTCTGGGAATATTAT
GCATAATGGGGTCCGACTTTGCTGCANGAGATGT
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