EY659269

Overview
NameEY659269
Unique NameEY659269
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_COLP3 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=gpmI PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.438e-20
Identity = 70/197 (35.53%), Postives = 106/197 (53.81%), Query Frame = 1
Query:   10 RADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETGT--LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAEL-----RGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGE 579
            +A+TP +D+     P    L+   G AVGLP E  MGNSEVGH  LGAGR+  Q    +  A++ G   ++    +   +  +    +H+ GLLS GGVHS  + +  +++ A +RGA+++ LH   DGRD    S+   +E  ++  ++L      G+G   QIAS  GR Y  MDR +  WD V+  ++  V GE
Sbjct:   28 QANTPVLDNLKAKYPNM--LIDTSGMAVGLP-EGQMGNSEVGHVNLGAGRVVYQDFTRITKAISDGDFIENPTLCHAVDTATSNNKAVHIFGLLSPGGVHSHEEHIFAMMELAKKRGAQKVYLHAFLDGRDTPPRSAQASLEKAQQKFSKLFTETDTGEG---QIASVIGR-YYAMDR-DQRWDRVEAAYNLMVNGE 216          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_VIBHB (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=gpmI PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 7.103e-20
Identity = 73/198 (36.87%), Postives = 107/198 (54.04%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETG--TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTA 600
            A TP MD+   + P    L+ A G  VGLP +  MGNSEVGH  +GAGR+  Q    +  ++A G+  +         S       +H++GL+S GGVHS  D +   ++ A+ RGA++I LH   DGRD    S+   ++  +   A+L GKG   ++AS  GR Y  MDR +N+WD V+  +D  +L +A    TA
Sbjct:   29 AKTPVMDALIANNPNT--LISASGMDVGLP-DGQMGNSEVGHTNIGAGRVVYQDLTRITKSIADGEFAETAALVEAIDSAVKAEKAVHIMGLMSPGGVHSHEDHIYAAVEMAAARGAEKIYLHCFLDGRDTPPRSAENSLQRFQDLFAKL-GKG---RVASLVGR-YYAMDR-DNNWDRVQVAYD--LLTQAKAEFTA 215          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_SYNJA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Synechococcus sp. (strain JA-3-3Ab) GN=gpmI PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 7.103e-20
Identity = 74/180 (41.11%), Postives = 100/180 (55.56%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQD----EGFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWD 540
            A TP +DS   + P    LL+A G AVGLP+   MGNSEVGH  LGAGR+  Q    +  A+ +G ++ +    E  + +K   + G  H IGL S+GGVHS +D L  LLK A++ G     +H +TDGRD L       +  +EK+L  L G GV   IA+  GR Y  MDR +  W+
Sbjct:   31 ARTPVVDSLWATYPHT--LLQASGRAVGLPS-GQMGNSEVGHLTLGAGRVVPQELVRISDAIETGSLFHEPLLVEVCHRLKE--QGGRFHFIGLCSEGGVHSHIDHLYGLLKLAAQAGIPAY-VHAITDGRDTLPRDGARVLAALEKELQWL-GSGV---IATLSGR-YYAMDR-DRRWE 198          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_STAHJ (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=gpmI PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 7.103e-20
Identity = 68/187 (36.36%), Postives = 99/187 (52.94%), Query Frame = 1
Query:   10 RADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFET--GTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDA 564
            +A  P  D +    P     + A G  VGLP E  MGNSEVGH  +GAGRI  Q    ++ ++A G  ++++  N            LH+ GLLSDGGVHS    L  LL+ A ++G  ++ +H   DGRDV   S++ ++E  E   A+ +  GV  + AS  GR Y  MDR +  WD  ++ ++A
Sbjct:   27 QAHKPNFDRYYSKYPTTQ--IEASGLDVGLP-EGQMGNSEVGHMNIGAGRIVYQSLTRINKSIADGDFFENDVLNNAVQHVNEHDSALHVFGLLSDGGVHSHYQHLFALLELAKQKGLDKVYVHAFLDGRDVDQKSALKYIEETE---AKFKSLGV-GEFASISGR-YYAMDR-DKRWDREQKAYNA 204          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_PSEU2 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=gpmI PE=3 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 7.103e-20
Identity = 72/180 (40.00%), Postives = 97/180 (53.89%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVV 546
            A  P MD   ++ P    L+   G  VGLP +  MGNSEVGH  LGAGR+  Q    V  A+  G+ +++      +  +   G  +H++GLLSDGGVHS  D L  + + A +RGA++I LH   DGRD    S+   +E ++   A L GKG  A I    GR Y  MDR +N WD V
Sbjct:   30 AKMPVMDRLYQTMPNG--LISGSGMDVGLP-DGQMGNSEVGHMNLGAGRVVYQDFTRVTKAIRDGEFFENPTICAAVDKAVSAGKAVHIMGLLSDGGVHSHQDHLVAMAELAVKRGAEKIYLHAFLDGRDTPPRSAKKSLELMDATFARL-GKGRTATIV---GR-YFAMDR-DNRWDRV 200          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_GRATL (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Gracilaria tenuistipitata var. liui GN=gpmI PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 7.103e-20
Identity = 71/172 (41.28%), Postives = 89/172 (51.74%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYI--KPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDR 522
            ADTPT+D    S P    LL A G  VGLP E  MGNSEVGH  +GAGRI  Q    +  ++     + +E  N I  K +F    LHLIGL S+GGVHS +  L  LL  A  R   +I +H +TDGRD     S  F+E I   + +         I +  GR Y +MDR
Sbjct:   26 ADTPTIDKLWNSYPNT--LLNASGRDVGLP-EGQMGNSEVGHTTIGAGRIINQDLVRISKSIEDRSFFNNEAINSICQKINFYNTKLHLIGLCSNGGVHSHIKHLFALLDIAM-RYKIQICIHAITDGRDTSPYGSKIFIEEINNQIQQFN----HINICTISGR-YYSMDR 188          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_YERPS (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Yersinia pseudotuberculosis GN=gpmI PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.277e-20
Identity = 78/200 (39.00%), Postives = 107/200 (53.50%), Query Frame = 1
Query:    7 VRADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNY-IKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTA 600
            + A TP MD   +  P    L+ A G  VGLP +  MGNSEVGH  LGAGRI  Q    +D  +  G  + +      +  + +TG  +H++GLLS GGVHS  D +  +++ A++RGA  I LH   DGRD    S+   ++      AEL G G   +IAS  GR Y  MDR +N WD V+  +D  +L +A    TA
Sbjct:   28 LNAKTPVMDVLWQQQPHT--LIAASGLDVGLP-DGQMGNSEVGHVNLGAGRIVYQDLTRLDKEIKEGDFFTNPTLTAAVDNAVKTGKAVHIMGLLSAGGVHSHEDHIMAMVELAAKRGATAIYLHAFLDGRDTPPRSAESSLKRFTAKFAEL-GNG---RIASIIGR-YYAMDR-DNRWDRVQLAYD--LLTQAKGEFTA 216          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_YERPP (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Yersinia pestis (strain Pestoides F) GN=gpmI PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.277e-20
Identity = 78/200 (39.00%), Postives = 107/200 (53.50%), Query Frame = 1
Query:    7 VRADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNY-IKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTA 600
            + A TP MD   +  P    L+ A G  VGLP +  MGNSEVGH  LGAGRI  Q    +D  +  G  + +      +  + +TG  +H++GLLS GGVHS  D +  +++ A++RGA  I LH   DGRD    S+   ++      AEL G G   +IAS  GR Y  MDR +N WD V+  +D  +L +A    TA
Sbjct:   28 LNAKTPVMDVLWQQQPHT--LIAASGLDVGLP-DGQMGNSEVGHVNLGAGRIVYQDLTRLDKEIKEGDFFTNPTLTAAVDNAVKTGKAVHIMGLLSAGGVHSHEDHIMAMVELAAKRGATAIYLHAFLDGRDTPPRSAESSLKRFTAKFAEL-GNG---RIASIIGR-YYAMDR-DNRWDRVQLAYD--LLTQAKGEFTA 216          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_YERPN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=gpmI PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.277e-20
Identity = 78/200 (39.00%), Postives = 107/200 (53.50%), Query Frame = 1
Query:    7 VRADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNY-IKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTA 600
            + A TP MD   +  P    L+ A G  VGLP +  MGNSEVGH  LGAGRI  Q    +D  +  G  + +      +  + +TG  +H++GLLS GGVHS  D +  +++ A++RGA  I LH   DGRD    S+   ++      AEL G G   +IAS  GR Y  MDR +N WD V+  +D  +L +A    TA
Sbjct:   28 LNAKTPVMDVLWQQQPHT--LIAASGLDVGLP-DGQMGNSEVGHVNLGAGRIVYQDLTRLDKEIKEGDFFTNPTLTAAVDNAVKTGKAVHIMGLLSAGGVHSHEDHIMAMVELAAKRGATAIYLHAFLDGRDTPPRSAESSLKRFTAKFAEL-GNG---RIASIIGR-YYAMDR-DNRWDRVQLAYD--LLTQAKGEFTA 216          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_YERPE (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Yersinia pestis GN=gpmI PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.277e-20
Identity = 78/200 (39.00%), Postives = 107/200 (53.50%), Query Frame = 1
Query:    7 VRADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNY-IKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTA 600
            + A TP MD   +  P    L+ A G  VGLP +  MGNSEVGH  LGAGRI  Q    +D  +  G  + +      +  + +TG  +H++GLLS GGVHS  D +  +++ A++RGA  I LH   DGRD    S+   ++      AEL G G   +IAS  GR Y  MDR +N WD V+  +D  +L +A    TA
Sbjct:   28 LNAKTPVMDVLWQQQPHT--LIAASGLDVGLP-DGQMGNSEVGHVNLGAGRIVYQDLTRLDKEIKEGDFFTNPTLTAAVDNAVKTGKAVHIMGLLSAGGVHSHEDHIMAMVELAAKRGATAIYLHAFLDGRDTPPRSAESSLKRFTAKFAEL-GNG---RIASIIGR-YYAMDR-DNRWDRVQLAYD--LLTQAKGEFTA 216          
The following BLAST results are available for this feature:
BLAST of EY659269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 272
Match NameE-valueIdentityDescription
GPMI_COLP35.438e-2035.532,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_VIBHB7.103e-2036.872,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SYNJA7.103e-2041.112,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_STAHJ7.103e-2036.362,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEU27.103e-2040.002,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_GRATL7.103e-2041.282,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_YERPS9.277e-2039.002,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_YERPP9.277e-2039.002,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_YERPN9.277e-2039.002,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_YERPE9.277e-2039.002,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659269 ID=EY659269; Name=EY659269; organism=Citrus sinensis; type=EST; length=934bp
CCACGCGTCCGCGCCGACACTCCCACCATGGACTCTTTCAATAAGTCTGC
CCCTGGGAGGTGGAGGTTGCTCCGAGCTCACGGTAGTGCTGTGGGGCTTC
CAACTGAAGATGACATGGGTAACAGTGAAGTCGGTCATAATGCACTCGGT
GCTGGTCGCATTTTTGCTCAAGGTGCAAAGCTTGTTGACCTTGCTCTGGC
CTCTGGGAAAATCTATCAAGATGAGGGATTTAATTACATTAAGCCATCTT
TTGAAACCGGCACATTGCACCTTATTGGGTTACTGAGTGATGGTGGAGTA
CACTCTAGGCTTGATCAACTTCAGTTGTTGCTAAAAGGAGCTAGTGAGCG
TGGTGCTAAAAGAATTCGTCTTCATATTCTTACTGACGGGCGTGATGTTT
TGGATGGTTCAAGCGTAGGATTCGTAGAAACTATTGAGAAAGATCTTGCA
GAATTGCGTGGGAAAGGTGTTGACGCGCAGATTGCATCTGGAGGAGGCCG
CATGTACGTCACGATGGACCGTTATGAGAATGATTGGGATGTTGTCAAAC
GATGATGGGATGCCCAAGTTCTTGGAGAAGCTCACACAAGTTTAACAGCG
CCGTTGAAGCTGTCAAAAAACTAAGGGAACAGCCCAATGCCAATGACCAG
TACTTACCTNCATTTGTCATTGTTGATGAAAATGGAAAAGCTGTGGGTCC
AATAGTANATGGTGATGCNAGTGTAACTTTCAACTTCGAGCTGATCGAAT
GGTATGCTTGCTAAGCCCCTGATATGAAGATTTGACAATTGGATCCGAGT
CGGGTCCCTAAATNCGTATGCTGGATGCTCATATGATGGGGGAGTGAAAC
TCCAGTCATACCNTGNNGTCTCTCGAGATGACAGACTCTGGGAATATTAT
GCATAATGGGGTCCGACTTTGCTGCANGAGATGT
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