EY659269

Overview
NameEY659269
Unique NameEY659269
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_YERPA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=gpmI PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.277e-20
Identity = 78/200 (39.00%), Postives = 107/200 (53.50%), Query Frame = 1
Query:    7 VRADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNY-IKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTA 600
            + A TP MD   +  P    L+ A G  VGLP +  MGNSEVGH  LGAGRI  Q    +D  +  G  + +      +  + +TG  +H++GLLS GGVHS  D +  +++ A++RGA  I LH   DGRD    S+   ++      AEL G G   +IAS  GR Y  MDR +N WD V+  +D  +L +A    TA
Sbjct:   28 LNAKTPVMDVLWQQQPHT--LIAASGLDVGLP-DGQMGNSEVGHVNLGAGRIVYQDLTRLDKEIKEGDFFTNPTLTAAVDNAVKTGKAVHIMGLLSAGGVHSHEDHIMAMVELAAKRGATAIYLHAFLDGRDTPPRSAESSLKRFTAKFAEL-GNG---RIASIIGR-YYAMDR-DNRWDRVQLAYD--LLTQAKGEFTA 216          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_YERP3 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=gpmI PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.277e-20
Identity = 78/200 (39.00%), Postives = 107/200 (53.50%), Query Frame = 1
Query:    7 VRADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNY-IKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTA 600
            + A TP MD   +  P    L+ A G  VGLP +  MGNSEVGH  LGAGRI  Q    +D  +  G  + +      +  + +TG  +H++GLLS GGVHS  D +  +++ A++RGA  I LH   DGRD    S+   ++      AEL G G   +IAS  GR Y  MDR +N WD V+  +D  +L +A    TA
Sbjct:   28 LNAKTPVMDVLWQQQPHT--LIAASGLDVGLP-DGQMGNSEVGHVNLGAGRIVYQDLTRLDKEIKDGDFFTNPTLTAAVDNAVKTGKAVHIMGLLSAGGVHSHEDHIMAMVELAAKRGATAIYLHAFLDGRDTPPRSAESSLKRFTAKFAEL-GNG---RIASIIGR-YYAMDR-DNRWDRVQLAYD--LLTQAKGEFTA 216          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_TRIEI (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Trichodesmium erythraeum (strain IMS101) GN=gpmI PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.277e-20
Identity = 72/203 (35.47%), Postives = 106/203 (52.22%), Query Frame = 1
Query:   19 TPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSF--ETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTAPLKLSKN 621
            TP +DS  ++ P    L++A G AVGLP E  MGNSEVGH  +GAGR+  Q    +  A+  G I Q++    I          LHL+GL S GGVHS ++ L  LL  A  +G   + +H +TDGRD    S +  ++ IE    ++   G+  +IA+  GR Y  MDR +  WD +++ ++        T  +A   L K+
Sbjct:   33 TPNIDSLWQAYPRT--LIQASGKAVGLP-EGQMGNSEVGHLNIGAGRVVPQELVRISDAIEDGLIVQNQAIKKICQDVIERNSKLHLVGLCSSGGVHSHVNHLLGLLDVAKAKGISDVCVHAITDGRDTNPKSGLHVLKQIEYHTNQI---GI-GRIATVSGR-YYAMDR-DKRWDRIQKAYEVMTQDGYGTGCSASDLLQKS 226          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_SYNP2 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=gpmI PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.277e-20
Identity = 72/187 (38.50%), Postives = 100/187 (53.48%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETGT----LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WD 561
            A+TP +D+F  + P    L+   G  VGLP +  MGNSEVGH  LGAGR+  Q    +  A+  G   +++    +K   ET      LHLIGL SDGGVHS L+ L  LL  A   G   + +H +TDGRD      + +++ I+   A +   GV   I++  GR Y  MDR +  WD VK+ +D
Sbjct:   31 ANTPNVDAFFATYPST--LIHTSGKRVGLP-DGQMGNSEVGHLNLGAGRVVPQELVRISDAIEDGSFLRNDVL--VKVCRETRQAGKKLHLIGLCSDGGVHSHLNHLLGLLDLAKVNGIADVHIHAITDGRDTNTTEGINYLQQIQ---AHIDKFGV-GSISTISGR-YFAMDR-DRRWDRVKQAYD 206          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_HALSA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Halobacterium salinarium GN=gpmI PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.277e-20
Identity = 69/186 (37.10%), Postives = 101/186 (54.30%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFET--GTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDA 564
            ADTPT D + +   G +  L   G  VGLP +  MGNSEVGH  +GAGR+  Q    ++ A+A+G +  ++  +          GTLH++GL+SDGGVH+    +  L++ A+ RG +   +H  TDGRD        ++  +E  +A+  G G    +AS  GR Y  MDR +N W   KR +DA
Sbjct:   25 ADTPTFDEYAER--GAFGTLTTSGRDVGLP-DGQMGNSEVGHLTIGAGRVVKQAYTRIEDAIAAGDLCGNDAISGALDHVADTGGTLHVMGLVSDGGVHADQQHIHALVECAAGRGVE-AAVHAFTDGRDTSPTGGEDYLADLEA-VADEHGTG---DVASVSGR-YYAMDRDQN-WARTKRAYDA 200          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_ENTS8 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=gpmI PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.277e-20
Identity = 74/191 (38.74%), Postives = 104/191 (54.45%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNY-IKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGE 579
            A TP MDS   + P    L+ A G  VGLP +  MGNSEVGH  LGAGRI  Q    +D+ +     +++      +  +   G  +H++GL S GGVHS  D +  +++ A+ RGA++I LH   DGRD    S+   +E      AE+ GKG   +IAS  GR Y  MDR +N WD V++ +D   L +
Sbjct:   30 AKTPVMDSLWVNRPHT--LIDASGLEVGLP-DRQMGNSEVGHVNLGAGRIVYQDLTRLDVEIKERTFFENPVLTAAVDKAVAAGKAVHIMGLASPGGVHSHEDHILAMIELAAARGAEKIYLHAFLDGRDTPPRSAKASLEKFAAKFAEV-GKG---RIASIIGR-YFAMDR-DNRWDRVEQAYDLLTLAK 211          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_HELPY (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Helicobacter pylori GN=gpmI PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.212e-19
Identity = 65/171 (38.01%), Postives = 98/171 (57.31%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDR 522
            A  PT D   K+ P  + L+  HG +VGLP +  MGNSEVGH  +GAGR+  Q    + L+L + ++  +  F N I+ S     +HL+GL+SDGGVHS ++   + L    E+  K++ LH++TDGRDV   S++ +++ ++    E        QIA+  GR Y  MDR
Sbjct:   27 AKKPTYDLMFKTLP--YSLIDTHGLSVGLP-KGQMGNSEVGHMCIGAGRVLYQDLVKISLSLQNDELKNNPAFLNTIQKS---PVVHLMGLMSDGGVHSHIEHF-IALALECEKSHKKVCLHLITDGRDVAPKSALTYLKQMQNICNE------SIQIATISGRFY-AMDR 183          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_PELCD (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=gpmI PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.582e-19
Identity = 67/191 (35.08%), Postives = 103/191 (53.93%), Query Frame = 1
Query:   10 RADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSF--ETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLG 576
            +ADTP + +  +S P     + A G  VGLP +  MGNSEVGH  +GAGR   Q    + L++     +++     +        G LHL+GLLSDGGVHS ++ L  L++ A   G +++ +H   DGRD    S  G++  +E  L ++ G G   ++A+  GR Y  MDR +N W+ V++ + A   G
Sbjct:   30 QADTPRLRALLESWPHA--RIGASGRDVGLP-DGQMGNSEVGHLNIGAGRTVYQDLTRISLSIEEDTFFENTELRKVMQQVVESQGKLHLMGLLSDGGVHSHMEHLYALVEMARRAGVEQVCIHAFMDGRDTPPQSGAGYLAQLEDKLQDI-GLG---RVATVIGR-YWAMDR-DNRWERVEKAYRAMTEG 211          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_CYAP7 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Cyanothece sp. (strain PCC 7424) GN=gpmI PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.582e-19
Identity = 74/185 (40.00%), Postives = 98/185 (52.97%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFET--GTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WD 561
            A+TP MDS  ++ P    L+R  G  VGLP E  MGNSEVGH  +GAGRI  Q    +  A+  G I+Q      +    +   G LHLIGL S GGVHS L  L  LL  A       + +H +TDGRD      V  +E I+  + ++   GV  +I++  GR Y  MDR +  WD VK+ +D
Sbjct:   31 ANTPVMDSLWEAYPKT--LIRTSGKDVGLP-EGQMGNSEVGHLNIGAGRIVPQELVRITDAIEDGSIFQSPVLINLCDEVKGRGGKLHLIGLSSAGGVHSHLCHLLGLLDLAKLHSVSDVCVHAITDGRDTNPTEGVNVIEAIQAHIDKI---GV-GRISTVCGR-YYAMDR-DRRWDRVKKAYD 206          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_VIBPA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vibrio parahaemolyticus GN=gpmI PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.067e-19
Identity = 73/198 (36.87%), Postives = 109/198 (55.05%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTA 600
            A TP MD+   + P    L+ A G  VGLP +  MGNSEVGH  +GAGR+  Q    +  ++A G+  Q       I  + +    +H++GL+S GGVHS  D +   ++ A+ RGA++I LH   DGRD    S+   ++  +   A+L GKG   ++AS  GR Y  MDR +N+W+ V+  +D  +L +A    TA
Sbjct:   29 AKTPVMDALIANNPHT--LISASGMDVGLP-DGQMGNSEVGHTNIGAGRVVYQDLTRITKSIADGEFEQTPALVEAIDAAVKAEKAVHIMGLMSPGGVHSHEDHIYAAVEMAAARGAEKIYLHCFLDGRDTPPRSAENSLQRFQDLFAKL-GKG---RVASLVGR-YYAMDR-DNNWERVQVAYD--LLTQAKAEFTA 215          
The following BLAST results are available for this feature:
BLAST of EY659269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 272
Match NameE-valueIdentityDescription
GPMI_YERPA9.277e-2039.002,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_YERP39.277e-2039.002,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_TRIEI9.277e-2035.472,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SYNP29.277e-2038.502,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_HALSA9.277e-2037.102,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ENTS89.277e-2038.742,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_HELPY1.212e-1938.012,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PELCD1.582e-1935.082,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CYAP71.582e-1940.002,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_VIBPA2.067e-1936.872,3-bisphosphoglycerate-independent phosphoglycera... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659269 ID=EY659269; Name=EY659269; organism=Citrus sinensis; type=EST; length=934bp
CCACGCGTCCGCGCCGACACTCCCACCATGGACTCTTTCAATAAGTCTGC
CCCTGGGAGGTGGAGGTTGCTCCGAGCTCACGGTAGTGCTGTGGGGCTTC
CAACTGAAGATGACATGGGTAACAGTGAAGTCGGTCATAATGCACTCGGT
GCTGGTCGCATTTTTGCTCAAGGTGCAAAGCTTGTTGACCTTGCTCTGGC
CTCTGGGAAAATCTATCAAGATGAGGGATTTAATTACATTAAGCCATCTT
TTGAAACCGGCACATTGCACCTTATTGGGTTACTGAGTGATGGTGGAGTA
CACTCTAGGCTTGATCAACTTCAGTTGTTGCTAAAAGGAGCTAGTGAGCG
TGGTGCTAAAAGAATTCGTCTTCATATTCTTACTGACGGGCGTGATGTTT
TGGATGGTTCAAGCGTAGGATTCGTAGAAACTATTGAGAAAGATCTTGCA
GAATTGCGTGGGAAAGGTGTTGACGCGCAGATTGCATCTGGAGGAGGCCG
CATGTACGTCACGATGGACCGTTATGAGAATGATTGGGATGTTGTCAAAC
GATGATGGGATGCCCAAGTTCTTGGAGAAGCTCACACAAGTTTAACAGCG
CCGTTGAAGCTGTCAAAAAACTAAGGGAACAGCCCAATGCCAATGACCAG
TACTTACCTNCATTTGTCATTGTTGATGAAAATGGAAAAGCTGTGGGTCC
AATAGTANATGGTGATGCNAGTGTAACTTTCAACTTCGAGCTGATCGAAT
GGTATGCTTGCTAAGCCCCTGATATGAAGATTTGACAATTGGATCCGAGT
CGGGTCCCTAAATNCGTATGCTGGATGCTCATATGATGGGGGAGTGAAAC
TCCAGTCATACCNTGNNGTCTCTCGAGATGACAGACTCTGGGAATATTAT
GCATAATGGGGTCCGACTTTGCTGCANGAGATGT
back to top