EY659269

Overview
NameEY659269
Unique NameEY659269
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_SHESH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella sediminis (strain HAW-EB3) GN=gpmI PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.067e-19
Identity = 69/192 (35.94%), Postives = 102/192 (53.12%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF--NYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEA 582
            A+TP +D  N   P    L+   G  VGLP +  MGNSEVGH  +G+GRI  Q    +  A+  G+  +++    +  K     G +H++GLLS GGVHS    ++ + + A  RGAK++ LH   DGRD    S+ G +   + DL    G G   ++AS  GR Y  MDR +N WD V + ++    G++
Sbjct:   30 ANTPVLDRLNAQYPNS--LISGSGLDVGLP-DGQMGNSEVGHINIGSGRIVYQELTRIGKAIEDGEFDKNQALVESIDKAIANQGAVHIMGLLSPGGVHSHESHIEAMCRLAVARGAKQVYLHAFLDGRDTPPRSAKGSLAHFD-DLFTTLGTG---RVASVIGR-YYAMDR-DNRWDRVSQAYELITEGKS 212          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_MYCPU (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mycoplasma pulmonis GN=gpmI PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.067e-19
Identity = 66/172 (38.37%), Postives = 90/172 (52.33%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFE--TGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDR 522
            A TP  D   K  P  W  ++A G  VGLP E  MGNSEVGH  +GAG+I   G  L++  L       ++ F  +    +    TLHL+GL+S GGVHS  D L  ++  A ++G K++ +H+  DGRDV   S     E +EK   +      +  IAS  GR Y +MDR
Sbjct:   31 AKTPFFDKMFKEFP--WSFIQASGKFVGLP-EGQMGNSEVGHLNIGAGQIVYTGLSLINKDLEEKNFINNKAFLEVIEDVKKNNSTLHLMGLVSPGGVHSLEDHLFEIIDVAYQKGLKKVSVHVFGDGRDVAPRSIKSSFEKLEKITNK-----YNYDIASISGRFY-SMDR 193          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_CYAP8 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Cyanothece sp. (strain PCC 8801) GN=gpmI PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.067e-19
Identity = 71/185 (38.38%), Postives = 95/185 (51.35%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFET--GTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WD 561
            A TP MD    S P    L+   G  VGLP    MGNSEVGH  LGAGRI  Q    +  A+    + ++     I          LHLIGL SDGGVHS LD L  LL+ A E+   ++ +H++TDGRD      +  V  +E  + E+   GV  +I +  GR Y  MDR +  WD +++ +D
Sbjct:   31 AKTPVMDCLWTSYPRT--LIHTSGKDVGLPN-GQMGNSEVGHLNLGAGRIVPQELVRISDAVEDKSLLRNPALVNICQEVRDRQSKLHLIGLCSDGGVHSHLDHLIGLLELAKEQHLDQVCIHVITDGRDTNTNEGINAVAKLESSIKEI---GV-GRIVTVSGR-YYAMDR-DRRWDRIQKAYD 206          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_PSYIN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Psychromonas ingrahamii (strain 37) GN=gpmI PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.699e-19
Identity = 71/199 (35.68%), Postives = 107/199 (53.77%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEA-HTSLTA 600
            A+TP +D   K       LL A G  VGLP +  MGNSEVGH  +GAGR   Q    V  +++ G  + ++ F + +  +   G  +H++GL S GGVHS    +   ++ A++RGAK I +H   DGRD    S+ G +   ++  A+L G G  A +    GR Y  MDR +N WD V++ ++     +A HT+ +A
Sbjct:   30 ANTPVLDKLCKDYANN--LLSASGMDVGLP-DGQMGNSEVGHTNIGAGRTVYQNLTKVTKSISDGDFFDNKNFVDAVDQAVAAGKAVHIMGLASPGGVHSHDQHIVAAIELAAQRGAKNILVHAFLDGRDTPPRSAAGTLALFDEKYAQL-GVGRTATLV---GR-YFAMDR-DNRWDRVEQAYNLLTQAKADHTAESA 219          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_PSEPF (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas fluorescens (strain Pf0-1) GN=gpmI PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.699e-19
Identity = 73/191 (38.22%), Postives = 102/191 (53.40%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGE 579
            A  P +D    + P    L+   G  VGLP +  MGNSEVGH  LGAGR+  Q    V  A+  G+ +++      +  +   G  +H +GLLSDGGVHS  D L  + + A +RGA++I LH   DGRD    S+   +E ++     L GKG   +IAS  GR Y  MDR +N WD V + ++  V G+
Sbjct:   30 AKKPVLDRLWATVPNG--LISGSGMDVGLP-DGQMGNSEVGHMNLGAGRVVYQDFTRVTKAIRDGEFFENPTICAAVDKAVAAGKAVHFMGLLSDGGVHSHQDHLIAMAELAFKRGAEKIYLHAFLDGRDTPPKSAASSIELLDATFQAL-GKG---RIASLIGR-YYAMDR-DNRWDRVAQAYNLIVDGK 211          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_GEOSL (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Geobacter sulfurreducens GN=gpmI PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 3.031e-19
Identity = 68/189 (35.98%), Postives = 97/189 (51.32%), Query Frame = 1
Query:   19 TPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFET--GTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGE 579
            TP MD      P     +   G AVGLP +  MGNSEVGH  +GAGR+  Q    +  ++  G  + +          +   G LHL GLLSDGGVHS    L  L++ A  +G K + +H   DGRD    S  G++  +E ++  + G G   ++A+  GR Y  MDR +N W+ V+R ++  V GE
Sbjct:   29 TPAMDRLMAEYPSVE--METSGMAVGLP-DGQMGNSEVGHLNIGAGRVVYQDLTRITKSIDDGDFFTNPVLLDCMARVKAAGGRLHLGGLLSDGGVHSHNTHLYALIELARRQGVKDVFVHAFLDGRDTPPSSGAGYLAELEAEIGRI-GFG---RVATVMGR-YWAMDR-DNRWERVERAYNTIVKGE 208          

HSP 2 Score: 23.483 bits (49), Expect = 3.031e-19
Identity = 8/23 (34.78%), Postives = 13/23 (56.52%), Query Frame = 3
Query:  669 IVDENGKAVGPIVXGDASVTFNF 737
            ++  NG  +G +  GD  + FNF
Sbjct:  236 VIAPNGSPLGLLADGDGFICFNF 258          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_MYCS5 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mycoplasma synoviae (strain 53) GN=gpmI PE=3 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 3.525e-19
Identity = 76/203 (37.44%), Postives = 112/203 (55.17%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDE----GFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTAPLK 609
            A+TP  D      P    L++A G  VGLP +  +GNSEVGH  +GAGR+   G  L++ AL   K  +++     FN +K +    TLHL+GLLS GGVHS    L  +LK A   G + + +H+  DGRDV   S     E++EK L EL  K    +IA+  GR Y +MDR +  +D  ++ + A +LG++    ++ L+
Sbjct:   26 ANTPFFDKLFSEYPNT--LIQASGEYVGLP-DGQIGNSEVGHLNIGAGRVVYTGLSLINKALKDDKFKENQVFLNAFNKVKEN--NSTLHLMGLLSPGGVHSLEAHLFEILKQAHNSGVENVAVHVFGDGRDVAPKS---IRESLEK-LQELVDK-YGYKIATISGRFY-SMDR-DKMFDRTEKAYKA-ILGKSGNEFSSALE 215          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_YERE8 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=gpmI PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.604e-19
Identity = 77/200 (38.50%), Postives = 107/200 (53.50%), Query Frame = 1
Query:    7 VRADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNY-IKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTA 600
            + A TP MD   +  P    L+ A G  VGLP +  MGNSEVGH  LGAGRI  Q    +D  +  G  + +      +  + + G  +H++GLLS GGVHS  D +  +++ A++RGA  I LH   DGRD    S+   ++   +  A L GKG   +IAS  GR Y  MDR +N WD V+  +D  +L +A    TA
Sbjct:   28 LNAKTPVMDRLWQQQPHT--LIAASGLDVGLP-DGQMGNSEVGHVNLGAGRIVYQDLTRLDKEIKDGDFFTNPTLTAAVDKAVKAGKAVHIMGLLSAGGVHSHEDHILAMVELAAKRGATAIYLHAFLDGRDTPPRSAEPSLKRFTEKFAAL-GKG---RIASIIGR-YYAMDR-DNRWDRVQLAYD--LLTQAKGEFTA 216          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_THIDA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=gpmI PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.604e-19
Identity = 74/196 (37.76%), Postives = 101/196 (51.53%), Query Frame = 1
Query:   10 RADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTS 591
            +A+ P  D   K  P    L+ A  S VGLP +  MGNSEVGH  +GAGR+  Q    +D A+ SG  Y +    N +  + + G TLH++GLLSDGGVHS       LL  A+  G  ++ LH+  DGRD    S+  ++  +   +A+    GV   +AS  GR Y  MDR +  W  VK  +D    G A  S
Sbjct:   27 QANKPNWDRLWKHHPHT--LIHASESEVGLP-KGQMGNSEVGHLNIGAGRVVYQEFTRIDRAIESGYFYTNPALLNAVHLARDNGKTLHVLGLLSDGGVHSHELHFHALLDLAAREGLSKVCLHVFLDGRDTPPKSAELYLRRLTDKIAQ---AGV-GHVASMIGR-YFAMDR-DRRWQRVKSAYDLLTQGAAEFS 213          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_RHOPA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Rhodopseudomonas palustris GN=gpmI PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.604e-19
Identity = 70/184 (38.04%), Postives = 97/184 (52.72%), Query Frame = 1
Query:    7 VRADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYI--KPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR 552
            ++A TPT D+   + P  +  LR  G +VGLP    MGNSEVGH  +GAGR+  Q    +  A+A+G+I +  G      K     GT HL+GL+S GGVHS  D    L K  ++ G K + LH  TDGRD    S+V  +  +  +L        +  IA+  GR Y  MDR +N W+ V +
Sbjct:   27 LQAKTPTFDALWTNGPHAF--LRTSGKSVGLPN-GQMGNSEVGHLNIGAGRVVMQDLPRISDAIANGEIERAPGLVAFIDKLKASGGTCHLMGLVSPGGVHSLQDHACALAKILAKAGVKTV-LHAFTDGRDTPPKSAVDDIVRLRAELPP------NVPIATVSGR-YYAMDR-DNRWERVSK 198          
The following BLAST results are available for this feature:
BLAST of EY659269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 272
Match NameE-valueIdentityDescription
GPMI_SHESH2.067e-1935.942,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_MYCPU2.067e-1938.372,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CYAP82.067e-1938.382,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSYIN2.699e-1935.682,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEPF2.699e-1938.222,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_GEOSL3.031e-1935.982,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_MYCS53.525e-1937.442,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_YERE84.604e-1938.502,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_THIDA4.604e-1937.762,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_RHOPA4.604e-1938.042,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659269 ID=EY659269; Name=EY659269; organism=Citrus sinensis; type=EST; length=934bp
CCACGCGTCCGCGCCGACACTCCCACCATGGACTCTTTCAATAAGTCTGC
CCCTGGGAGGTGGAGGTTGCTCCGAGCTCACGGTAGTGCTGTGGGGCTTC
CAACTGAAGATGACATGGGTAACAGTGAAGTCGGTCATAATGCACTCGGT
GCTGGTCGCATTTTTGCTCAAGGTGCAAAGCTTGTTGACCTTGCTCTGGC
CTCTGGGAAAATCTATCAAGATGAGGGATTTAATTACATTAAGCCATCTT
TTGAAACCGGCACATTGCACCTTATTGGGTTACTGAGTGATGGTGGAGTA
CACTCTAGGCTTGATCAACTTCAGTTGTTGCTAAAAGGAGCTAGTGAGCG
TGGTGCTAAAAGAATTCGTCTTCATATTCTTACTGACGGGCGTGATGTTT
TGGATGGTTCAAGCGTAGGATTCGTAGAAACTATTGAGAAAGATCTTGCA
GAATTGCGTGGGAAAGGTGTTGACGCGCAGATTGCATCTGGAGGAGGCCG
CATGTACGTCACGATGGACCGTTATGAGAATGATTGGGATGTTGTCAAAC
GATGATGGGATGCCCAAGTTCTTGGAGAAGCTCACACAAGTTTAACAGCG
CCGTTGAAGCTGTCAAAAAACTAAGGGAACAGCCCAATGCCAATGACCAG
TACTTACCTNCATTTGTCATTGTTGATGAAAATGGAAAAGCTGTGGGTCC
AATAGTANATGGTGATGCNAGTGTAACTTTCAACTTCGAGCTGATCGAAT
GGTATGCTTGCTAAGCCCCTGATATGAAGATTTGACAATTGGATCCGAGT
CGGGTCCCTAAATNCGTATGCTGGATGCTCATATGATGGGGGAGTGAAAC
TCCAGTCATACCNTGNNGTCTCTCGAGATGACAGACTCTGGGAATATTAT
GCATAATGGGGTCCGACTTTGCTGCANGAGATGT
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