EY659269

Overview
NameEY659269
Unique NameEY659269
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_HALMA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Haloarcula marismortui GN=gpmI PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.853e-19
Identity = 76/201 (37.81%), Postives = 101/201 (50.25%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGK-------IYQDEGF---NYIKPSFET-----GTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQV 570
            ADTP  D +  +  G    L  HG  VGLP E  MGNSEVGH  +GAGR+  Q +  V  ++A  +         QD  F     I  +FE      G +H +GL+SDGGVHS  D L  L++ A ERG   +  H  TDGRD        ++  +E  + E  G G    +A+  GR Y  MDR +N W+  +R +DA V
Sbjct:   26 ADTPNFDRYRDA--GAASTLTTHGRRVGLP-EGQMGNSEVGHLNIGAGRVVKQDSARVSDSIARSRGEAPPDDDAQDPPFFENETILSAFEHAEAHGGRVHFMGLVSDGGVHSYQDHLHALIELAGERGTDAVS-HAFTDGRDTSPTGGEDYLADLEAHVEE-HGTG---HVATVCGR-YYAMDRDQN-WERTRRAYDAIV 216          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_FRATT (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Francisella tularensis subsp. tularensis GN=gpmI PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.853e-19
Identity = 74/195 (37.95%), Postives = 100/195 (51.28%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-----NYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEA 582
            A+TPT DS  +  P    L+ A    VGLP    MGNSEVGH  +G GR+  Q    +D A+       ++       N IK       LHLIGLLS GGVHS  + +  ++K A ++G KR+ LH   DGRD    S+   ++  +K L +L        IAS  GR Y  MDR +N WD V++ ++A V   A
Sbjct:   27 ANTPTWDSIWQEFPKT--LINASSLEVGLP-RSQMGNSEVGHVNIGCGRVVYQELTKIDKAIEEKTFGDNKAICAAIDNAIK---NDSNLHLIGLLSPGGVHSHEEHIFEMIKIAKQKGIKRLYLHAFLDGRDTPPRSAEKSIKKADKLLQDLN----LGYIASVCGR-YYAMDR-DNRWDRVEKAYNAIVNANA 209          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_FRATN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Francisella tularensis subsp. novicida (strain U112) GN=gpmI PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.853e-19
Identity = 74/195 (37.95%), Postives = 100/195 (51.28%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-----NYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEA 582
            A+TPT DS  +  P    L+ A    VGLP    MGNSEVGH  +G GR+  Q    +D A+       ++       N IK       LHLIGLLS GGVHS  + +  ++K A ++G KR+ LH   DGRD    S+   ++  +K L +L        IAS  GR Y  MDR +N WD V++ ++A V   A
Sbjct:   27 ANTPTWDSIWQEFPKT--LINASSLEVGLP-RGQMGNSEVGHVNIGCGRVVYQELTKIDKAIEEKTFGDNKAIGAAIDNVIK---NDSNLHLIGLLSPGGVHSHEEHIFEMIKIAKQKGIKRLYLHAFLDGRDTPPRSAEKSIKKADKLLQDLN----LGYIASVCGR-YYAMDR-DNRWDRVEKAYNAIVNANA 209          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_FRAT1 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=gpmI PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.853e-19
Identity = 74/195 (37.95%), Postives = 100/195 (51.28%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-----NYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEA 582
            A+TPT DS  +  P    L+ A    VGLP    MGNSEVGH  +G GR+  Q    +D A+       ++       N IK       LHLIGLLS GGVHS  + +  ++K A ++G KR+ LH   DGRD    S+   ++  +K L +L        IAS  GR Y  MDR +N WD V++ ++A V   A
Sbjct:   27 ANTPTWDSIWQEFPKT--LINASSLEVGLP-RSQMGNSEVGHVNIGCGRVVYQELTKIDKAIEEKTFGDNKAICAAIDNAIK---NDSNLHLIGLLSPGGVHSHEEHIFEMIKIAKQKGIKRLYLHAFLDGRDTPPRSAEKSIKKADKLLQDLN----LGYIASVCGR-YYAMDR-DNRWDRVEKAYNAIVNANA 209          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_FRAP2 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=gpmI PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.853e-19
Identity = 74/195 (37.95%), Postives = 103/195 (52.82%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLAL-----ASGKIYQDEGFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEA 582
            A+TPT DS  +  P    L+ A    VGLP    MGNSEVGH  +G GR+  Q    +D A+      + K   D   N I+   +   LHL+GLLS GGVHS  + +  ++K A ++G KR+ LH   DGRD    S+   ++  + DL +    G    IAS  GR Y  MDR +N WD V++ ++A V  +A
Sbjct:   27 ANTPTWDSIWQDFPRT--LISASSLEVGLP-RGQMGNSEVGHVNIGCGRVVYQELTKIDKAIEEKTFGNNKAICDAIDNVIQ---KDSNLHLMGLLSPGGVHSHEEHIFEMIKIAKQKGVKRVYLHAFLDGRDTPPRSAESSIKKTD-DLLQKLNLG---YIASVSGR-YYAMDR-DNRWDRVEKAYNAIVNADA 209          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_SHESM (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella sp. (strain MR-4) GN=gpmI PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.026e-18
Identity = 72/192 (37.50%), Postives = 103/192 (53.65%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEA 582
            A+TP +D  N  A     L+   G  VGLP +  MGNSEVGH  LG+GRI  Q    +  A+A  +  Q+    + +  + + G  +H++GLLS GGVHS  + ++ + + A  RGA ++ LH   DGRD    S+ G +   + DL    G G   +IAS  GR Y  MDR +N WD V + +D    G+A
Sbjct:   30 ANTPVLDRLN--AQYAHGLISGSGLDVGLP-DGQMGNSEVGHINLGSGRIVYQELTRISKAIADHEFEQNPALCDAVDVAVKAGGAVHIMGLLSPGGVHSHEEHIEAMCRMAVARGATKVYLHAFLDGRDTPPRSAKGSLSHFD-DLFTTLGHG---RIASIIGR-YFAMDR-DNRWDRVSQAYDLITQGKA 212          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_PSE14 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=gpmI PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.026e-18
Identity = 71/180 (39.44%), Postives = 96/180 (53.33%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVV 546
            A  P MD   ++ P    L+   G  VGLP +  MGNSEVGH  LGAGR+  Q    V  A+  G+ +++      +  +   G  +H++GLLSDGGVHS    L  + + A +RGA++I LH   DGRD    S+   +E ++   A L GKG  A I    GR Y  MDR +N WD V
Sbjct:   30 AKMPVMDRLYETMPNG--LISGSGMDVGLP-DGQMGNSEVGHMNLGAGRVVYQDFTRVTKAIRDGEFFENPTICAAVDKAVGAGKAVHIMGLLSDGGVHSHQGHLVAMAELAVKRGAEKIYLHAFLDGRDTPPRSAKKSLELMDATFARL-GKGRTATII---GR-YFAMDR-DNRWDRV 200          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_GLOVI (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Gloeobacter violaceus GN=gpmI PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.026e-18
Identity = 70/178 (39.33%), Postives = 94/178 (52.81%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFET--GTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWD 540
            A TP  D+   S P  + L+   G AVGLP    MGNSEVGH  LGAGR+  Q    +  A+  G +  +     +  +     G LH +GL+SDGGVHS ++ L  LL  A   G + + +H ++DGRD    S V + E +E  +AE  G G    IA+ GGR Y  MDR +  WD
Sbjct:   35 AKTPIFDALKASYP--FTLIHTSGKAVGLP-RGQMGNSEVGHLNLGAGRMVPQELVRISDAVEEGTLLSNPELLRLCRTVRERGGKLHGVGLVSDGGVHSHIEHLFGLLDLAKREGFETLFIHGMSDGRDTPPTSGVAYFEKLEARIAE-TGFGT---IATLGGR-YFGMDR-DRRWD 203          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_BACFR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacteroides fragilis GN=gpmI PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.026e-18
Identity = 68/173 (39.31%), Postives = 91/173 (52.60%), Query Frame = 1
Query:   70 LRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQD----EGFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLG 576
            L+A G  VGLP +  MGNSEVGH  +GAGR+  Q    ++L+     I ++      F+Y K + +   +H +GL SDGGVHS LD L  L   A E   +   +H   DGRD    S  GF+E +E   A+  GK     +AS  GR Y  MDR +  W+ VK  +D  V G
Sbjct:   44 LQASGENVGLP-DGQMGNSEVGHLNIGAGRVVYQDLVKINLSCRDNSILKNPEIVSAFSYAKENGKN--VHFMGLTSDGGVHSSLDHLFKLCDIAKEYNIENTFVHCFMDGRDTDPKSGKGFIEQLEAHCAKSAGK-----VASIIGR-YYAMDR-DKRWERVKEAYDLLVNG 206          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_BACFN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=gpmI PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.026e-18
Identity = 68/173 (39.31%), Postives = 91/173 (52.60%), Query Frame = 1
Query:   70 LRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQD----EGFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLG 576
            L+A G  VGLP +  MGNSEVGH  +GAGR+  Q    ++L+     I ++      F+Y K + +   +H +GL SDGGVHS LD L  L   A E   +   +H   DGRD    S  GF+E +E   A+  GK     +AS  GR Y  MDR +  W+ VK  +D  V G
Sbjct:   44 LQASGENVGLP-DGQMGNSEVGHLNIGAGRVVYQDLVKINLSCRDNSILKNPEIVSAFSYAKENGKN--VHFMGLTSDGGVHSSLDHLFKLCDIAKEYNIENTFVHCFMDGRDTDPKSGKGFIEQLEAHCAKSAGK-----VASIIGR-YYAMDR-DKRWERVKEAYDLLVNG 206          
The following BLAST results are available for this feature:
BLAST of EY659269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 272
Match NameE-valueIdentityDescription
GPMI_HALMA7.853e-1937.812,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_FRATT7.853e-1937.952,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_FRATN7.853e-1937.952,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_FRAT17.853e-1937.952,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_FRAP27.853e-1937.952,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHESM1.026e-1837.502,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSE141.026e-1839.442,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_GLOVI1.026e-1839.332,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACFR1.026e-1839.312,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACFN1.026e-1839.312,3-bisphosphoglycerate-independent phosphoglycera... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659269 ID=EY659269; Name=EY659269; organism=Citrus sinensis; type=EST; length=934bp
CCACGCGTCCGCGCCGACACTCCCACCATGGACTCTTTCAATAAGTCTGC
CCCTGGGAGGTGGAGGTTGCTCCGAGCTCACGGTAGTGCTGTGGGGCTTC
CAACTGAAGATGACATGGGTAACAGTGAAGTCGGTCATAATGCACTCGGT
GCTGGTCGCATTTTTGCTCAAGGTGCAAAGCTTGTTGACCTTGCTCTGGC
CTCTGGGAAAATCTATCAAGATGAGGGATTTAATTACATTAAGCCATCTT
TTGAAACCGGCACATTGCACCTTATTGGGTTACTGAGTGATGGTGGAGTA
CACTCTAGGCTTGATCAACTTCAGTTGTTGCTAAAAGGAGCTAGTGAGCG
TGGTGCTAAAAGAATTCGTCTTCATATTCTTACTGACGGGCGTGATGTTT
TGGATGGTTCAAGCGTAGGATTCGTAGAAACTATTGAGAAAGATCTTGCA
GAATTGCGTGGGAAAGGTGTTGACGCGCAGATTGCATCTGGAGGAGGCCG
CATGTACGTCACGATGGACCGTTATGAGAATGATTGGGATGTTGTCAAAC
GATGATGGGATGCCCAAGTTCTTGGAGAAGCTCACACAAGTTTAACAGCG
CCGTTGAAGCTGTCAAAAAACTAAGGGAACAGCCCAATGCCAATGACCAG
TACTTACCTNCATTTGTCATTGTTGATGAAAATGGAAAAGCTGTGGGTCC
AATAGTANATGGTGATGCNAGTGTAACTTTCAACTTCGAGCTGATCGAAT
GGTATGCTTGCTAAGCCCCTGATATGAAGATTTGACAATTGGATCCGAGT
CGGGTCCCTAAATNCGTATGCTGGATGCTCATATGATGGGGGAGTGAAAC
TCCAGTCATACCNTGNNGTCTCTCGAGATGACAGACTCTGGGAATATTAT
GCATAATGGGGTCCGACTTTGCTGCANGAGATGT
back to top