EY659269

Overview
NameEY659269
Unique NameEY659269
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_MYCPE (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mycoplasma penetrans GN=gpmI PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 5.628e-17
Identity = 68/204 (33.33%), Postives = 106/204 (51.96%), Query Frame = 1
Query:    7 VRADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQD----EGFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTAPL 606
            + A TP MD+  K     +  + A G  VGLP +  +GNSEVGH  +GAGRI   G  L++  + + K   +    E  N+ K +     +H++GLLS GGVHS    +  +++  SE G K + +H+  DGRDV   S +  +E +   L +  G      IA+  GR Y +MDR +  W+  K+ +D  +LG ++     P+
Sbjct:   26 LNAKTPFMDNLVKEYDHCY--IEASGEYVGLP-DGQIGNSEVGHLTIGAGRIVYTGLSLINQDIKTKKFDSNKTLLEAINHAKKN--NSNIHIMGLLSPGGVHSNEQHIFEMIRIVSENGLKPV-IHVFGDGRDVAPQSIISSLERLNDVLKKYPG-----TIATISGRFY-SMDR-DKRWERTKQAYD-NLLGISNNYFDNPI 215          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_MYCMS (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mycoplasma mycoides subsp. mycoides SC GN=gpmI PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.628e-17
Identity = 59/158 (37.34%), Postives = 81/158 (51.27%), Query Frame = 1
Query:   61 WRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEG----FNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDR 522
            W    A G  VGLP E+ MGNSEVGH  LGAGRI  +    ++    +  I +++     F Y+K +     LHL+GL S+GGVHS  D +  + K A + G   I+  ++TDGRD     +  F+    KDL EL  +  +  I S     Y  MDR
Sbjct:   43 WLKAHASGKWVGLP-ENQMGNSEVGHIHLGAGRINLESLAKLNHETKTNNIAKNDEIVKTFEYVKKN--NSALHLMGLFSNGGVHSHFDHMIAIYKAAIDYGITNIKFDLITDGRDTKPKLAYDFI----KDLLELIKQNNNIGIISSISGRYYAMDR 193          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_THEEB (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Thermosynechococcus elongatus (strain BP-1) GN=gpmI PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.350e-17
Identity = 66/178 (37.08%), Postives = 95/178 (53.37%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFE--TGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWD 540
            A TP +DS  ++ P    L+   G AVGLP +  MGNSEVGH  +GAGRI  Q    +  A+  G ++ +     +  + +   G LH IGL S GGVHS +D L  L++ A   G     +H++TDGRD     + G +E +E+ L +  G G   +I +  GR Y  MDR +  W+
Sbjct:   31 AYTPVIDSLWQAYPHT--LIHTSGKAVGLP-KGQMGNSEVGHLNIGAGRIVPQELVRISDAVEEGSLFSNPVLVRLCQTVKERNGKLHFIGLCSAGGVHSHIDHLYGLVELAKRHGLPAC-IHVITDGRDTPPRDAAGVLEELEQRL-KTSGCG---RIVTVSGR-YYAMDR-DRRWE 198          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_SHESW (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella sp. (strain W3-18-1) GN=gpmI PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.350e-17
Identity = 67/192 (34.90%), Postives = 99/192 (51.56%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEA 582
            A TP +D  N   P    L+   G  VGLP +  MGNSEVGH  LG+GRI  Q    +  A++  +   +    + +  +   G  +H++GLLS GGVHS  + ++ + + A  RGA ++ LH   DGRD    S+   +   + DL    G G   ++AS  GR Y  MDR +N WD V + ++    G+A
Sbjct:   30 AKTPVLDRLNAQYPHG--LISGSGLDVGLP-DGQMGNSEVGHINLGSGRIVYQELTRISKAISDHEFETNPALCDAVDSAINAGGAVHIMGLLSPGGVHSHEEHIEAMCRMAVARGATKVYLHAFLDGRDTPPRSAKASLSHFD-DLFTTLGHG---RVASIIGR-YFAMDR-DNRWDRVSQAYELITQGKA 212          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_SHEPC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=gpmI PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.350e-17
Identity = 67/192 (34.90%), Postives = 99/192 (51.56%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEA 582
            A TP +D  N   P    L+   G  VGLP +  MGNSEVGH  LG+GRI  Q    +  A++  +   +    + +  +   G  +H++GLLS GGVHS  + ++ + + A  RGA ++ LH   DGRD    S+   +   + DL    G G   ++AS  GR Y  MDR +N WD V + ++    G+A
Sbjct:   30 AKTPVLDRLNAQYPHG--LISGSGLDVGLP-DGQMGNSEVGHINLGSGRIVYQELTRISKAISDHEFETNPALCDAVDSAINAGGAVHIMGLLSPGGVHSHEEHIEAMCRMAVARGATKVYLHAFLDGRDTPPRSAKASLSHFD-DLFTTLGHG---RVASIIGR-YFAMDR-DNRWDRVSQAYELITQGKA 212          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_ANTSP (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Antithamnion sp. GN=gpmI PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.139e-16
Identity = 68/193 (35.23%), Postives = 101/193 (52.33%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFN-------YIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQV 570
            A+TP +D    + P    LL A G  VGLP +  MGNSEVGH  +GAGRI  Q     DL   S  I   E FN       Y     +   +H++GL S+GGVHS ++ L+ L++  S++      LH++TDGRD L   +  FV    K++ ++  +  + +I +  GR Y +MDR +  W   ++ + A V
Sbjct:   31 ANTPIIDKLWDNYPKT--LLSASGEHVGLPHKQ-MGNSEVGHTTIGAGRIINQ-----DLVKISKSIKNKEFFNNYQLHNIYKYSCEKNSKVHIVGLCSNGGVHSHINHLKALIQ-ISKQYKVMTCLHLITDGRDTLPKQAKLFV----KEIIDIIDENYNTEICTISGR-YYSMDR-DCRWSRTEKAYKAMV 208          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_ACIAD (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Acinetobacter sp. (strain ADP1) GN=gpmI PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.648e-16
Identity = 65/182 (35.71%), Postives = 94/182 (51.65%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF--NYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR 552
            A TP++    +  P    L+   G  VGLP +  MGNSEVGH  LGAGR+  Q    +   +  G  ++ E       K     G +H++GLLS+GGVHS  D +  + + A +RGA  + LH   DGRD    S+   +E ++   A+   +G   +I S  GR Y  MDR +N WD V++
Sbjct:   33 AKTPSLSMMKQKHPHS--LISGSGEDVGLP-DGQMGNSEVGHMNLGAGRVLYQDFTRITKDIRDGVFFEHEVLVDAVEKAKAVHGAVHIMGLLSEGGVHSHEDHIVAMCELALKRGA-TVYLHAFLDGRDTPPKSAQPSLEKLDALFAQYPEQG---RIVSMIGR-YFAMDR-DNRWDRVEQ 205          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_MYCGA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mycoplasma gallisepticum GN=gpmI PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.764e-16
Identity = 60/178 (33.71%), Postives = 100/178 (56.18%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEG-FNYIKPSFETGT-LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWD 540
            A TP +D+   + P    +L+A G AVGLP ++ +GNSEVGH  +GAGRI   G  L++  + + K + ++   N I  + +  + LH++GL+S+GGVHS ++ +  +++ A++     I LHI  DGRDV     +  ++ + K     + +    +I +  GR Y  MDR +  WD
Sbjct:   26 AKTPHLDNLMNNNPTI--MLQASGEAVGLP-KNQIGNSEVGHLNIGAGRIIYTGLSLINKEIENKKFFTNQALLNAIDHAKKNNSKLHILGLVSNGGVHSHINHIYAIMELANQHNVPAI-LHIFGDGRDVPPTQLLADLDQLIK-----KAETTKTKIGTISGRFY-AMDR-DQRWD 192          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_MYCCT (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) GN=gpmI PE=3 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 4.764e-16
Identity = 58/158 (36.71%), Postives = 80/158 (50.63%), Query Frame = 1
Query:   61 WRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEG----FNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDR 522
            W    A G  VGLP E+ MGNSEVGH  LGAGRI  +    ++    +  I +++     F Y+K +     LHL+GL S+GGVHS  D +  + K A   G   I+  ++TDGRD     +  F+    K+L EL  +  +  I S     Y  MDR
Sbjct:   43 WLKAHASGKWVGLP-ENQMGNSEVGHIHLGAGRINLESLAKLNHETKTNNIAKNDEIVKTFEYVKKN--NSALHLMGLFSNGGVHSHFDHMIAIYKAAIVYGITNIKFDLITDGRDTKPKLAYDFI----KNLLELIKQNNNIGIISSVSGRYYAMDR 193          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_MESFL (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mesoplasma florum GN=gpmI PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.127e-16
Identity = 63/168 (37.50%), Postives = 87/168 (51.79%), Query Frame = 1
Query:   37 FNKSAPGRWRLLRAHGSA--VGLPTEDDMGNSEVGHNALGAGRIFAQG-AKLVDLALASGKIYQD---EGFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDR 522
            F K   G +  ++AH S   VGLP E  MGNSEVGH  LGAGRI  +  AKL       G +  +   + F Y+K       LHL+GL SDGGVHS ++ +  + K A + G   I+  ++TDGRD     +  ++  +   L  ++      +IAS  GR Y  MDR
Sbjct:   33 FVKEMMGMYPWVKAHASGEWVGLP-EGQMGNSEVGHIHLGAGRINMESLAKLNHEVKVDGFLTNEVLVDTFKYVKE--HNSALHLMGLFSDGGVHSHMNHMISMYKAAVKFGLTNIKFDLITDGRDTAPKVAEQYINQL---LQVIKDNNNIGEIASISGR-YFAMDR 193          
The following BLAST results are available for this feature:
BLAST of EY659269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 272
Match NameE-valueIdentityDescription
GPMI_MYCPE5.628e-1733.332,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_MYCMS5.628e-1737.342,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_THEEB7.350e-1737.082,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHESW7.350e-1734.902,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHEPC7.350e-1734.902,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ANTSP2.139e-1635.232,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ACIAD3.648e-1635.712,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_MYCGA4.764e-1633.712,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_MYCCT4.764e-1636.712,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_MESFL8.127e-1637.502,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659269 ID=EY659269; Name=EY659269; organism=Citrus sinensis; type=EST; length=934bp
CCACGCGTCCGCGCCGACACTCCCACCATGGACTCTTTCAATAAGTCTGC
CCCTGGGAGGTGGAGGTTGCTCCGAGCTCACGGTAGTGCTGTGGGGCTTC
CAACTGAAGATGACATGGGTAACAGTGAAGTCGGTCATAATGCACTCGGT
GCTGGTCGCATTTTTGCTCAAGGTGCAAAGCTTGTTGACCTTGCTCTGGC
CTCTGGGAAAATCTATCAAGATGAGGGATTTAATTACATTAAGCCATCTT
TTGAAACCGGCACATTGCACCTTATTGGGTTACTGAGTGATGGTGGAGTA
CACTCTAGGCTTGATCAACTTCAGTTGTTGCTAAAAGGAGCTAGTGAGCG
TGGTGCTAAAAGAATTCGTCTTCATATTCTTACTGACGGGCGTGATGTTT
TGGATGGTTCAAGCGTAGGATTCGTAGAAACTATTGAGAAAGATCTTGCA
GAATTGCGTGGGAAAGGTGTTGACGCGCAGATTGCATCTGGAGGAGGCCG
CATGTACGTCACGATGGACCGTTATGAGAATGATTGGGATGTTGTCAAAC
GATGATGGGATGCCCAAGTTCTTGGAGAAGCTCACACAAGTTTAACAGCG
CCGTTGAAGCTGTCAAAAAACTAAGGGAACAGCCCAATGCCAATGACCAG
TACTTACCTNCATTTGTCATTGTTGATGAAAATGGAAAAGCTGTGGGTCC
AATAGTANATGGTGATGCNAGTGTAACTTTCAACTTCGAGCTGATCGAAT
GGTATGCTTGCTAAGCCCCTGATATGAAGATTTGACAATTGGATCCGAGT
CGGGTCCCTAAATNCGTATGCTGGATGCTCATATGATGGGGGAGTGAAAC
TCCAGTCATACCNTGNNGTCTCTCGAGATGACAGACTCTGGGAATATTAT
GCATAATGGGGTCCGACTTTGCTGCANGAGATGT
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