EY659269

Overview
NameEY659269
Unique NameEY659269
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_NITOC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=gpmI PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.810e-15
Identity = 63/192 (32.81%), Postives = 97/192 (50.52%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYI--KPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEA 582
            A TP  D+     P    ++RA G+ VGLP E  MGNSEVGH  LG+GR+  Q    V+ AL +G  + +        +       +H++GLLS  G+H   D +  +++ A +R  + + LH   DGRD    S+   +  ++    EL GKG   + AS  GR Y  MDR ++ W  ++  ++    G+A
Sbjct:   30 AHTPIWDTLWDRYPHT--IIRASGAEVGLPNEQ-MGNSEVGHLNLGSGRVIYQEYTRVNRALRTGSFFTNHTLTEAVDRAVKSDKAIHILGLLSPSGIHCHEDHIHAMVELAIKRRCQEVYLHAFLDGRDTAPKSAQASILAMQAKFTEL-GKG---RFASLIGR-YYGMDR-DHRWPRIQAAYNLIATGQA 212          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_RHOBA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Rhodopirellula baltica GN=gpmI PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.364e-15
Identity = 68/198 (34.34%), Postives = 95/198 (47.98%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDE----GFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERG--AKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHT 588
            A+TP  D   +  P    L+   G  VGLP    MGNSEVGH  +GAGRI  Q    +  A+     + +       +++K S   G LHL+GL+SDG VHS L     ++  A   G    ++ +H +TDGRD      + FV  +  D  E  G GV   +AS  GR Y  MDR +  W+ V+  ++    G   T
Sbjct:   39 ANTPVDDKLTQEYPSV--LIHTSGEDVGLPA-GVMGNSEVGHQNIGAGRIVDQEVMRITRAIRDDSFFSNPVVTGAIDHVKKS--GGRLHLLGLMSDGRVHSDLQHGIAVIDLAKRNGLTGDQLAIHAITDGRDTSPRGGLKFVSQL-TDHCEASGVGV---VASVIGRFY-AMDR-DLRWERVEAAYNLMTQGTGQT 225          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_MYCGE (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mycoplasma genitalium GN=gpmI PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.033e-15
Identity = 72/216 (33.33%), Postives = 106/216 (49.07%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFET--GTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTAPLKLSKN*GNSPMPMTST 654
            A+TP +D    S P    LL A G AVGLP    +GNSEVGH  +GAGR+   G  L++  +     + ++ F       E     +HLIGL S+GGVHS  + L  L++  S+    ++ LH+  DGRDV   +     + +EK +  L+    +  I + GGR Y  MDR +         WD +++     +  A L +SKN  N P+    T
Sbjct:   27 ANTPMLDELINSYP--CVLLDASGEAVGLPM-GQIGNSEVGHLNIGAGRVVYTGLSLINQHIKDRSFFANKAFLKTIEHVEKNHSKIHLIGLFSNGGVHSHNEHLLALIELFSKHA--KVVLHLFGDGRDV---APCSLKQDLEKLMIFLKNY-PNVVIGTIGGR-YYGMDRDQR--------WDREMI-----AYKALLGVSKNKFNDPIGYIET 219          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_WOLPM (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Wolbachia pipientis wMel GN=gpmI PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.880e-15
Identity = 56/158 (35.44%), Postives = 81/158 (51.27%), Query Frame = 1
Query:   70 LRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLV--DLALASGKIYQDEGFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDW 537
            L A G+ VGLP    +GNSEVGH  +G+GR+  Q  + +  ++      +      N +K   + G  H++GL+SDGGVHS    +  L    S+ G K + +H   DGRD L  S    ++   K +     KG D +IA+  GR Y  MDR +N W
Sbjct:   46 LSACGADVGLPG-GQIGNSEVGHMNIGSGRVVIQSLQRINQEIGTIENNVNLQSFINDLKS--KNGVCHIMGLVSDGGVHSHQKHISTLANKISQHGIK-VVIHAFLDGRDTLPNSGKKCIQEFTKSI-----KGNDTRIATVSGR-YYAMDR-DNRW 192          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_WOLTR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=gpmI PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.934e-14
Identity = 54/157 (34.39%), Postives = 83/157 (52.87%), Query Frame = 1
Query:   70 LRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWD 540
            L A G+ VGLP +  +GNSEVGH  + +GR+  Q  + +D  + + +  ++          + G  H++GL+SDGGVHS    +  L    S+   K + +H   DGRD L  S    V+  E+++     KG D +IA+  GR Y  MDR +N W+
Sbjct:   46 LSACGTDVGLP-DGQIGNSEVGHMNICSGRVVMQSLQRIDREIKTIENNKNLRSFISDLKDKNGVCHIMGLVSDGGVHSHQKHISTLANKISQHEIK-VVIHAFLDGRDTLPNSGKKCVQEFEENI-----KGNDIRIATVSGR-YYAMDR-DNRWE 193          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_ANAPZ (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Anaplasma phagocytophilum (strain HZ) GN=gpmI PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.297e-13
Identity = 65/205 (31.71%), Postives = 108/205 (52.68%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKP-SFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTAPLKLSKN 621
            A TP  D+     P     L A G+ VGLP+   +GNSEVGH ++G GRI  Q    ++L +   +++++    ++++    + G  H+IGLLSDGGVHS    ++ +++  +  G K + +H++ DGRDV   S+  ++  +   +  L     +A+IA+  GR Y  MDR +N  D   + +DA        S +A   L K+
Sbjct:   28 AYTPFWDTAVSCCP--MSSLSASGTDVGLPS-GQVGNSEVGHISIGCGRIVLQDLLRINLEI--NEVHKNPKLLDFVRDIQAKGGVCHMIGLLSDGGVHSLQAHMETIIEVITGFGIK-VFIHVILDGRDVPPRSAEKYIGMLNAKIEHL-----NAEIATVAGR-YYAMDR-DNRLDRTCKAYDAIAYATGPRSGSAMEALEKS 219          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_EHRCJ (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Ehrlichia canis (strain Jake) GN=gpmI PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.410e-13
Identity = 55/153 (35.95%), Postives = 80/153 (52.29%), Query Frame = 1
Query:   70 LRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLV--DLALASGKIYQDEGFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDR 522
            L  HGS+VGLP +  +GNSEVGH  LG+GRI  Q    +  ++      +Y  E  N IK +   G  H+ GLLSDGGVHS    +  ++   S+    ++ +HI  DGRD    S+  ++  + + +  L     +  IA+  GR Y  MDR
Sbjct:   45 LITHGSSVGLP-DGQIGNSEVGHVNLGSGRIVLQDLCKINNEIKYIKDNVYLLEFINKIKKN--NGICHIAGLLSDGGVHSSYTHILDIINTLSDFQI-QVAVHIFLDGRDTPPISATKYISILCEHIKHLN----NINIATLSGR-YYAMDR 188          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_EHRRG (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Ehrlichia ruminantium (strain Gardel) GN=gpmI PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.174e-12
Identity = 62/195 (31.79%), Postives = 96/195 (49.23%), Query Frame = 1
Query:   10 RADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFE-----TGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGE 579
            +ADTP  DS     P     +  HG  VGLP +  +GNSEVGH +LG+GRI  Q     DL   + +I       ++    E      G  H+ GLLSDGG+HS L  +  ++   S     ++ +HI  DGRD    S++ ++  +   + +L     +  IA+  GR Y +MDR +N  D   + +++   G+
Sbjct:   27 QADTPYWDSIISQYPQS--NIVTHGPDVGLP-DRQIGNSEVGHISLGSGRIVLQ-----DLCRINEEIKNIRKNTHLLEFTEQIKRNNGICHIAGLLSDGGIHSSLSHMLDIIDALSYLKI-QVVIHIFLDGRDTPPISALKYINILCSHIKDLN----NVSIATISGR-YYSMDR-DNRLDRTTKAYNSIAFGD 206          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_ANAMM (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Anaplasma marginale (strain St. Maries) GN=gpmI PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 5.451e-12
Identity = 54/153 (35.29%), Postives = 77/153 (50.33%), Query Frame = 1
Query:   70 LRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETG--TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDR 522
            L A G  VGLP    +GNSEVGH +LGAGR+  Q  + ++  +  G+I+ +        + + G    H++GLLSDGGVH   D +  L +  +E   K + +H   DGRDV   S+   V  +   +        D  IA+  GR Y  MDR
Sbjct:   45 LSASGEDVGLPAAQ-VGNSEVGHISLGAGRVVLQDLQRINAEI--GEIHSNPYLLQFAEAIKNGRGVCHIMGLLSDGGVHGLQDHITQLARVLAELRIK-VLIHAFLDGRDVSPRSAKKHVTALNDAV-----HSYDISIATISGR-YYAMDR 187          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_EHRRW (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Ehrlichia ruminantium (strain Welgevonden) GN=gpmI PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.119e-12
Identity = 59/176 (33.52%), Postives = 87/176 (49.43%), Query Frame = 1
Query:   10 RADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFE-----TGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDR 522
            +ADTP  DS     P     +  HG  VGLP +  +GNSEVGH +LG+GRI  Q     DL   + +I       ++    E      G  H+ GLLSDGG+HS L  +  ++   S     ++ +HI  DGRD    S++ ++  +   + +L     +  IA+  GR Y +MDR
Sbjct:   27 QADTPYWDSIISQYPQS--NIVTHGPDVGLP-DRQIGNSEVGHISLGSGRIVLQ-----DLCRINEEIKNIRKNTHLLEFTEQIKRNNGICHIAGLLSDGGIHSSLSHMLDIIDALSYLKI-QVVIHIFLDGRDTPPISALKYINILCSHIKDLS----NVSIATISGR-YYSMDR 188          
The following BLAST results are available for this feature:
BLAST of EY659269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 272
Match NameE-valueIdentityDescription
GPMI_NITOC1.810e-1532.812,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_RHOBA2.364e-1534.342,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_MYCGE4.033e-1533.332,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_WOLPM6.880e-1535.442,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_WOLTR9.934e-1434.392,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ANAPZ1.297e-1331.712,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_EHRCJ8.410e-1335.952,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_EHRRG4.174e-1231.792,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ANAMM5.451e-1235.292,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_EHRRW7.119e-1233.522,3-bisphosphoglycerate-independent phosphoglycera... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659269 ID=EY659269; Name=EY659269; organism=Citrus sinensis; type=EST; length=934bp
CCACGCGTCCGCGCCGACACTCCCACCATGGACTCTTTCAATAAGTCTGC
CCCTGGGAGGTGGAGGTTGCTCCGAGCTCACGGTAGTGCTGTGGGGCTTC
CAACTGAAGATGACATGGGTAACAGTGAAGTCGGTCATAATGCACTCGGT
GCTGGTCGCATTTTTGCTCAAGGTGCAAAGCTTGTTGACCTTGCTCTGGC
CTCTGGGAAAATCTATCAAGATGAGGGATTTAATTACATTAAGCCATCTT
TTGAAACCGGCACATTGCACCTTATTGGGTTACTGAGTGATGGTGGAGTA
CACTCTAGGCTTGATCAACTTCAGTTGTTGCTAAAAGGAGCTAGTGAGCG
TGGTGCTAAAAGAATTCGTCTTCATATTCTTACTGACGGGCGTGATGTTT
TGGATGGTTCAAGCGTAGGATTCGTAGAAACTATTGAGAAAGATCTTGCA
GAATTGCGTGGGAAAGGTGTTGACGCGCAGATTGCATCTGGAGGAGGCCG
CATGTACGTCACGATGGACCGTTATGAGAATGATTGGGATGTTGTCAAAC
GATGATGGGATGCCCAAGTTCTTGGAGAAGCTCACACAAGTTTAACAGCG
CCGTTGAAGCTGTCAAAAAACTAAGGGAACAGCCCAATGCCAATGACCAG
TACTTACCTNCATTTGTCATTGTTGATGAAAATGGAAAAGCTGTGGGTCC
AATAGTANATGGTGATGCNAGTGTAACTTTCAACTTCGAGCTGATCGAAT
GGTATGCTTGCTAAGCCCCTGATATGAAGATTTGACAATTGGATCCGAGT
CGGGTCCCTAAATNCGTATGCTGGATGCTCATATGATGGGGGAGTGAAAC
TCCAGTCATACCNTGNNGTCTCTCGAGATGACAGACTCTGGGAATATTAT
GCATAATGGGGTCCGACTTTGCTGCANGAGATGT
back to top