EY659269

Overview
NameEY659269
Unique NameEY659269
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_BACAH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus thuringiensis (strain Al Hakam) GN=gpmI PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 5.865e-25
Identity = 80/199 (40.20%), Postives = 114/199 (57.29%), Query Frame = 1
Query:   10 RADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETGT-LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTA 600
            +A  P  D +    P     L A G AVGLP E  MGNSEVGH  +GAGRI  Q    V++A+  G+  ++E F + IK   E GT LHL GLLSDGGVHS ++ +  LL+ A++ G +++ +H   DGRDV   ++  +++   + + E    GV  Q A+  GR Y +MDR +  WD V++ + A V GE  T  +A
Sbjct:   26 QAKKPNFDGYWNKFPHT--TLTACGEAVGLP-EGQMGNSEVGHLNIGAGRIVYQSLTRVNVAIREGEFDKNETFQSAIKSVKEKGTALHLFGLLSDGGVHSHMNHMFALLRLAAKEGVEKVYIHAFLDGRDVGPKTAQSYIDATNEVMKE---TGV-GQFATISGR-YYSMDR-DKRWDRVEKCYRAMVNGEGPTYKSA 215          

HSP 2 Score: 23.8682 bits (50), Expect = 5.865e-25
Identity = 18/52 (34.62%), Postives = 26/52 (50.00%), Query Frame = 3
Query:  591 FNSAVEAVKKLREQPNAN---DQYLPXFVIVDENGKAVGPIVXGDASVTFNF 737
            + SA E V    E   AN   D+++   VIV+E+   V  I   DA + +NF
Sbjct:  212 YKSAEECV----EDSYANGIYDEFVLPSVIVNEDNTPVATINDDDAVIFYNF 259          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_CLOB1 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=gpmI PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 9.577e-25
Identity = 79/205 (38.54%), Postives = 116/205 (56.59%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFE--TGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTAPLKLSKN 621
            A+ P +D+  K  P     L A G  VGLP E  MGNSEVGH  +GAGRI  Q    +  +++ G  +++   N    + +    TLHL+GLLS GGVHS +D L+ L+K A E+  K++ +H   DGRDV   S+  ++E IE  + E+   GV  +IA+  GR Y  MDR +  W+ V+  ++A VLG+   + +A   L K+
Sbjct:   28 ANKPNLDNILKKYPHTQ--LGASGMDVGLP-EGQMGNSEVGHLNIGAGRIVYQALTKITKSISDGDFFENVALNKAIENVKKNNSTLHLLGLLSPGGVHSHIDHLKGLIKLAKEKDIKKVYIHAFLDGRDVAPSSAKEYIEDIENYMNEI---GV-GEIATISGR-YYAMDR-DKRWERVQLCYNAIVLGKGEEANSAVEGLEKS 223          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_CLOK5 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=gpmI PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 9.934e-25
Identity = 72/195 (36.92%), Postives = 112/195 (57.44%), Query Frame = 1
Query:   22 PTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSF--ETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTA 600
            P +D + K  P     L A G +VGLP E  MGNSEVGH  +GAGRI  Q    +  ++  G+ +++E  N    +       LHL+GL+S GGVHS  + L+ LL+ A ++GA R+ +H  TDGRDV   S+  +++ +EK + ++   G+  +IA+  GR Y  MDR +  W+ V+  ++A V G  + + +A
Sbjct:   31 PNLDKYFKKYPHTE--LGASGLSVGLP-EGQMGNSEVGHLNIGAGRIVYQALTRITKSINEGQFFKNEVLNSAVDNAVKNNSDLHLLGLVSPGGVHSHTNHLKGLLQLAKQKGASRVYIHAFTDGRDVPPSSAYMYIDDMEKYIQKI---GI-GKIATVSGR-YYAMDR-DKRWERVELAYNALVYGRGNKAASA 216          

HSP 2 Score: 27.7202 bits (60), Expect = 9.934e-25
Identity = 16/51 (31.37%), Postives = 27/51 (52.94%), Query Frame = 3
Query:  585 HKFNSAVEAVKKLREQPNANDQYLPXFVIVDENGKAVGPIVXGDASVTFNF 737
            +K  SA EAV    +    ++  +P   +++E+ K V  I  GD+ + FNF
Sbjct:  211 NKAASASEAVTNSYDNGKTDEFIVP--TVIEEDNKPVTTIKNGDSVIFFNF 259          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI1_METAC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1 OS=Methanosarcina acetivorans GN=gpmI1 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.251e-24
Identity = 78/190 (41.05%), Postives = 107/190 (56.32%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYI-KPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLG 576
            A TP +D   K  P  W LL A G AVGLP E  MGNSE GH  +GAGRI  Q    +++++ +G  +++  F N I K      +LHLIGL+S GGVHS    L  L+K A E+G K++ +H   DGRDV   +++G ++ + +   E  G    A+IA+  GR Y  MDR +  WD  K  +D   LG
Sbjct:   30 AGTPNLDRLVKDYP--WCLLEASGGAVGLP-EGMMGNSEDGHLNIGAGRIVYQNLTRINISIRNGDFFKNPVFLNAISKVKANDSSLHLIGLVSCGGVHSYTPHLHALIKLAKEKGLKKVYIHAFLDGRDVPPKTALGDIKKLNEFCKEHGG----AKIATVSGR-YYAMDR-DKRWDRTKLAYDVLTLG 210          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_CLOTH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=gpmI PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.293e-24
Identity = 77/198 (38.89%), Postives = 109/198 (55.05%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFE--TGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTA 600
            A+ P +D F +  P    ++R  G  VGLP +  MGNSEVGH  +GAGRI  Q    +  ++  G  ++ + F     +       LHL GLLSDGGVHS    L  LL+ A  +  K + +H   DGRDV   S++G+VE +E  + E+   GV  +IA+  GR Y  MDR +N W+ VK  +DA VLG  + + +A
Sbjct:   28 ANKPNIDRFMREYPNT--IVRTSGMDVGLP-DGQMGNSEVGHTNIGAGRIVYQELTRITKSIQDGDFFEKKEFLDAAENCRKHNSKLHLFGLLSDGGVHSHNTHLYGLLEFAKRQNLKDVYVHCFFDGRDVPPDSAMGYVEELENKIREI---GV-GEIATVMGR-YYAMDR-DNRWERVKLAYDAMVLGRGNQAQSA 216          

HSP 2 Score: 22.3274 bits (46), Expect = 1.293e-24
Identity = 13/47 (27.66%), Postives = 24/47 (51.06%), Query Frame = 3
Query:  597 SAVEAVKKLREQPNANDQYLPXFVIVDENGKAVGPIVXGDASVTFNF 737
            SA EAV +  ++   ++   P   ++ +NG  V  +   D+ + FNF
Sbjct:  215 SAKEAVAESYKRQEFDEFVKP--TVIMKNGSPVATVGENDSIIFFNF 259          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_BACP2 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus pumilus (strain SAFR-032) GN=gpmI PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.682e-24
Identity = 75/194 (38.66%), Postives = 110/194 (56.70%), Query Frame = 1
Query:   10 RADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF----NYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGE 579
            +A  P  D +    P +   L A G AVGLP +  MGNSEVGH  +GAGRI  Q    V++A+  G+  ++E F     Y K + +   LHL GLLSDGGVHS +  L  LLK A + G  ++ +H   DGRDV   ++  +++ +E+ + E+   GV  ++A+  GR Y +MDR +  WD V++ + A   GE
Sbjct:   27 QAKKPNFDRYWNEFPHQ--TLTASGEAVGLP-QGQMGNSEVGHLNIGAGRIVYQSLTRVNVAIRDGEFEKNETFLEAMTYAKENDKA--LHLFGLLSDGGVHSHIQHLFALLKLAKKEGLTKVYIHGFLDGRDVGQKTAKVYLKQLEEQIKEI---GV-GEVATLSGR-YYSMDR-DKRWDRVEKAYRAMAYGE 209          

HSP 2 Score: 26.9498 bits (58), Expect = 1.682e-24
Identity = 11/31 (35.48%), Postives = 19/31 (61.29%), Query Frame = 3
Query:  645 DQYLPXFVIVDENGKAVGPIVXGDASVTFNF 737
            D+++   VI  ENG+ V  +  GD+ + +NF
Sbjct:  230 DEFVIPSVITRENGEPVAKVNDGDSVIFYNF 260          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_BACSU (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus subtilis GN=gpmI PE=1 SV=4)

HSP 1 Score: 106.301 bits (264), Expect = 1.682e-24
Identity = 76/191 (39.79%), Postives = 107/191 (56.02%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGE 579
            A  P  D +    P +   L A G AVGLP E  MGNSEVGH  +GAGRI  Q    V++A+  G+  +++ F + I  + E    LHL GLLSDGGVHS ++ L  LLK A + G  ++ +H   DGRDV   ++  ++  +   + E+   GV  +IAS  GR Y +MDR +  WD V++ + A   GE
Sbjct:   28 AKKPNFDRYWNQYPHQ--TLTASGEAVGLP-EGQMGNSEVGHLNIGAGRIVYQSLTRVNVAIREGEFERNQTFLDAISNAKENNKALHLFGLLSDGGVHSHINHLFALLKLAKKEGLTKVYIHGFLDGRDVGPQTAKTYINQLNDQIKEI---GV-GEIASISGR-YYSMDR-DKRWDRVEKAYRAMAYGE 209          

HSP 2 Score: 28.1054 bits (61), Expect = 1.682e-24
Identity = 12/31 (38.71%), Postives = 19/31 (61.29%), Query Frame = 3
Query:  645 DQYLPXFVIVDENGKAVGPIVXGDASVTFNF 737
            D+++   VI  ENG+ V  I  GD+ + +NF
Sbjct:  230 DEFVIPSVITKENGEPVAKIQDGDSVIFYNF 260          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_CLOBL (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=gpmI PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.134e-24
Identity = 79/205 (38.54%), Postives = 116/205 (56.59%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFE--TGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTAPLKLSKN 621
            A+ P +D+  K  P     L A G  VGLP E  MGNSEVGH  +GAGRI  Q    +  +++ G  +++   N    + +    TLHL+GLLS GGVHS +D L+ L+K A E+  K++ +H   DGRDV   S+  ++E IE  + E+   GV  +IA+  GR Y  MDR +  W+ V+  ++A VLG+   + +A   L K+
Sbjct:   28 ANKPNLDNILKKYPHTQ--LGASGMDVGLP-EGQMGNSEVGHLNIGAGRIVYQALTKITKSISDGDFFENVALNKAIENAKKNNSTLHLLGLLSPGGVHSHIDHLKGLIKLAKEKDIKKVYIHAFLDGRDVAPSSAKEYIEDIEIYMQEI---GV-GEIATISGR-YYAMDR-DKRWERVQLCYNAIVLGKGEEANSAVEGLEKS 223          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_THICR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Thiomicrospira crunogena (strain XCL-2) GN=gpmI PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.753e-24
Identity = 75/196 (38.27%), Postives = 111/196 (56.63%), Query Frame = 1
Query:   10 RADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETGT-----LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEA 582
            +A TP  D+  K       L+   G AVGLP E  MGNSEVGH  LGAGR+  Q    +   +  G+ +++   N +  + +  +     +H++GLLSDGGVHS +  ++  +K A +RGAK + +HI TDGRD    S++ ++E +E  + EL G     +IAS  GR Y  +DR +N W+ VK+ +DA   G A
Sbjct:   33 QAHTPNWDNLLKDY--HHTLINTSGLAVGLP-EGQMGNSEVGHMNLGAGRVVYQELTRIQKDIDDGRFFEN---NALVKAIDAASNRDHKVHILGLLSDGGVHSHISHIKASIKMAHDRGAK-VYVHIFTDGRDTAPQSALQYIEELETFMKELGG----GRIASVTGR-YFALDR-DNRWERVKKAYDAIACGSA 215          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_PROMT (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Prochlorococcus marinus (strain NATL2A) GN=gpmI PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.208e-24
Identity = 72/179 (40.22%), Postives = 103/179 (57.54%), Query Frame = 1
Query:   10 RADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFETG--TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWD 540
            +A TP +D+   + P    L+ A G+ VGLP E  MGNSEVGH  +GAGRI  Q    +   +   K+  +   N    S + G  TLH++GL SDGGVHS +  L  L++ A+ +G K + LH+ TDGRD    S+  ++ TIE   A+++  GV  +I+S  GR Y  MDR +N W+
Sbjct:   39 QASTPVIDALWHAYPHT--LIEASGADVGLPDEQ-MGNSEVGHLTIGAGRIIQQELVRISNTVKENKLIANPALNQFSQSLKKGGGTLHIMGLCSDGGVHSHIKHLCGLIEWAASKGLKNVSLHLFTDGRDTSAKSATKYINTIE---AKIKATGV-GEISSLCGR-YWAMDR-DNRWE 208          
The following BLAST results are available for this feature:
BLAST of EY659269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 272
Match NameE-valueIdentityDescription
GPMI_BACAH5.865e-2540.202,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CLOB19.577e-2538.542,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CLOK59.934e-2536.922,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI1_METAC1.251e-2441.052,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CLOTH1.293e-2438.892,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACP21.682e-2438.662,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACSU1.682e-2439.792,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CLOBL2.134e-2438.542,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_THICR4.753e-2438.272,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PROMT6.208e-2440.222,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659269 ID=EY659269; Name=EY659269; organism=Citrus sinensis; type=EST; length=934bp
CCACGCGTCCGCGCCGACACTCCCACCATGGACTCTTTCAATAAGTCTGC
CCCTGGGAGGTGGAGGTTGCTCCGAGCTCACGGTAGTGCTGTGGGGCTTC
CAACTGAAGATGACATGGGTAACAGTGAAGTCGGTCATAATGCACTCGGT
GCTGGTCGCATTTTTGCTCAAGGTGCAAAGCTTGTTGACCTTGCTCTGGC
CTCTGGGAAAATCTATCAAGATGAGGGATTTAATTACATTAAGCCATCTT
TTGAAACCGGCACATTGCACCTTATTGGGTTACTGAGTGATGGTGGAGTA
CACTCTAGGCTTGATCAACTTCAGTTGTTGCTAAAAGGAGCTAGTGAGCG
TGGTGCTAAAAGAATTCGTCTTCATATTCTTACTGACGGGCGTGATGTTT
TGGATGGTTCAAGCGTAGGATTCGTAGAAACTATTGAGAAAGATCTTGCA
GAATTGCGTGGGAAAGGTGTTGACGCGCAGATTGCATCTGGAGGAGGCCG
CATGTACGTCACGATGGACCGTTATGAGAATGATTGGGATGTTGTCAAAC
GATGATGGGATGCCCAAGTTCTTGGAGAAGCTCACACAAGTTTAACAGCG
CCGTTGAAGCTGTCAAAAAACTAAGGGAACAGCCCAATGCCAATGACCAG
TACTTACCTNCATTTGTCATTGTTGATGAAAATGGAAAAGCTGTGGGTCC
AATAGTANATGGTGATGCNAGTGTAACTTTCAACTTCGAGCTGATCGAAT
GGTATGCTTGCTAAGCCCCTGATATGAAGATTTGACAATTGGATCCGAGT
CGGGTCCCTAAATNCGTATGCTGGATGCTCATATGATGGGGGAGTGAAAC
TCCAGTCATACCNTGNNGTCTCTCGAGATGACAGACTCTGGGAATATTAT
GCATAATGGGGTCCGACTTTGCTGCANGAGATGT
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