EY659269

Overview
NameEY659269
Unique NameEY659269
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_BACSK (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus clausii (strain KSM-K16) GN=gpmI PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 8.734e-23
Identity = 73/193 (37.82%), Postives = 108/193 (55.96%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF----NYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGE 579
            A  P  D +    P     LRA G  VGLP E  MGNSEVGH  +GAGRI  Q    V+L++  G  +++E F    +++K   +   LH+ GLLSDGG+HS +D +  LL  A ++  +R+ +H   DGRDV   S+  +++ ++    E+ G G   ++A+  GR Y  MDR +  WD V++ + A V GE
Sbjct:   28 AQKPNFDRYWNEFPHA--TLRADGENVGLP-EGQMGNSEVGHLNIGAGRIVYQSLTRVNLSIREGDFFKNETFIKAMDHVKE--KQSALHIYGLLSDGGIHSHIDHIYALLDMAKQQNVERVYVHGFLDGRDVGPTSAEVYLKGLQDKFDEV-GLG---KLATVHGR-YYAMDR-DKRWDRVEKSYRAMVYGE 209          

HSP 2 Score: 23.483 bits (49), Expect = 8.734e-23
Identity = 11/34 (32.35%), Postives = 18/34 (52.94%), Query Frame = 3
Query:  636 NANDQYLPXFVIVDENGKAVGPIVXGDASVTFNF 737
            N  D+++   VI +E+G  V  +   DA +  NF
Sbjct:  227 NIVDEFVIPSVITEEDGTPVATVKDDDAVIFCNF 260          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_DESAP (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Desulforudis audaxviator (strain MP104C) GN=gpmI PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 8.735e-23
Identity = 77/205 (37.56%), Postives = 106/205 (51.71%), Query Frame = 1
Query:   10 RADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNY-IKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTAPLKLSK 618
            +ADTP  + +    P    +L+  G  VGLP    MGNSEVGH  LGAGRI  Q    +  A+  G  +++      I+ S   G  LHL+GLLSDGGVHS +  L  LL+ A     + + +H   DGRDV   +++ +VE +E  L  L G G    +AS  GR Y  MDR +  W+   R + A V GE   + +A   + K
Sbjct:   28 QADTPNWNRYRSVWPRT--VLKCSGEDVGLPP-GQMGNSEVGHLNLGAGRIVYQDLTRITRAVRDGSFFENAVLRTSIEASRRNGHALHLMGLLSDGGVHSHISHLFALLELAGRLDQRSVYVHAFLDGRDVPPANALEYVEALEDKLKTL-GYGA---VASVIGR-YYAMDR-DRRWERTARAYRAMVYGEGLRASSARQAVEK 223          

HSP 2 Score: 28.4906 bits (62), Expect = 8.735e-23
Identity = 19/48 (39.58%), Postives = 29/48 (60.42%), Query Frame = 3
Query:  594 NSAVEAVKKLREQPNANDQYLPXFVIVDENGKAVGPIVXGDASVTFNF 737
            +SA +AV+K  E+    D+++   VIV  +G+ V  +  GDA V FNF
Sbjct:  215 SSARQAVEKGYER-GETDEFIQPTVIV-RDGRPVAQVRDGDALVFFNF 260          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_COXBU (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Coxiella burnetii GN=gpmI PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.964e-23
Identity = 86/222 (38.74%), Postives = 119/222 (53.60%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYI--KPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAH-TSLTAP--LKLSKN*GNSPMPMTSTYLH 663
            A+TPT+D   +  P    LL A G AVGLP +  MGNSEVGH  +G GR   Q    +D A+ASG+ Y++        K       +H++GLLS GGVHSR +Q+  L++ A   G K+I LH + DGRD    S++  +E I  D     G G   +IAS  GR Y  MDR +  WD  ++ +D    G A   +LTA   L L+   GN+   ++ T +H
Sbjct:   34 ANTPTLDKLFRHYPHT--LLEASGRAVGLP-DGQMGNSEVGHLHIGGGRKVPQDLTRIDAAIASGEFYENPALIEALEKAKALNKAVHILGLLSPGGVHSRDNQIAALVELAHRCGIKKIYLHAILDGRDTPPKSALLSIEKI-TDQFHAYGNG---KIASLIGR-YYAMDR-DKRWDRTEKAYDLLTQGTAQFHALTAKEGLMLAYEQGNTDEFVSPTSIH 246          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_COXBR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=gpmI PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.964e-23
Identity = 86/222 (38.74%), Postives = 119/222 (53.60%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYI--KPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAH-TSLTAP--LKLSKN*GNSPMPMTSTYLH 663
            A+TPT+D   +  P    LL A G AVGLP +  MGNSEVGH  +G GR   Q    +D A+ASG+ Y++        K       +H++GLLS GGVHSR +Q+  L++ A   G K+I LH + DGRD    S++  +E I  D     G G   +IAS  GR Y  MDR +  WD  ++ +D    G A   +LTA   L L+   GN+   ++ T +H
Sbjct:   34 ANTPTLDKLFRHYPHT--LLEASGRAVGLP-DGQMGNSEVGHLHIGGGRKVPQDLTRIDAAIASGEFYENPALIEALEKAKALNKAVHILGLLSPGGVHSRDNQIAALVELAHHCGIKKIYLHAILDGRDTPPKSALLSIEKI-TDQFHAYGNG---KIASLIGR-YYAMDR-DKRWDRTEKAYDLLTQGTAQFHALTAKEGLMLAYEQGNTDEFVSPTSIH 246          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_CLOPS (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium perfringens (strain SM101 / Type A) GN=gpmI PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.964e-23
Identity = 73/186 (39.25%), Postives = 108/186 (58.06%), Query Frame = 1
Query:   70 LRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETGT-LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTAPLKLSKN 621
            L+A G  VGLP E  MGNSEVGH  +GAGRI  Q    +   +  G  + ++     +  + E  T LHL+GLLS+GGVHS +D L+ LL+ A ++G +++ +H   DGRDV   S   F+  +E  + E+   GV  +IA+  GR Y  MDR +N W+ V+  ++A VLGE   + +A   + K+
Sbjct:   45 LQASGLEVGLP-EGQMGNSEVGHLNIGAGRIIYQELTRITKEIKEGTFFTNKALVKAMDEAKENNTSLHLMGLLSNGGVHSHIDHLKGLLELAKKKGLQKVYVHAFMDGRDVAPSSGKEFIVELENAMKEI---GV-GEIATISGR-YYAMDR-DNRWERVELAYNAMVLGEGEKASSAVEAIEKS 223          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_CLOP1 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=gpmI PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.964e-23
Identity = 73/186 (39.25%), Postives = 108/186 (58.06%), Query Frame = 1
Query:   70 LRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETGT-LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTAPLKLSKN 621
            L+A G  VGLP E  MGNSEVGH  +GAGRI  Q    +   +  G  + ++     +  + E  T LHL+GLLS+GGVHS +D L+ LL+ A ++G +++ +H   DGRDV   S   F+  +E  + E+   GV  +IA+  GR Y  MDR +N W+ V+  ++A VLGE   + +A   + K+
Sbjct:   45 LQASGLEVGLP-EGQMGNSEVGHLNIGAGRIIYQELTRITKEIKEGTFFTNKALVKAMDEAKENNTSLHLMGLLSNGGVHSHIDHLKGLLELAKKKGLQKVYVHAFMDGRDVAPSSGKEFIVELENAMKEI---GV-GEIATISGR-YYAMDR-DNRWERVELAYNAMVLGEGEKASSAVEAIEKS 223          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_VIBFM (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vibrio fischeri (strain MJ11) GN=gpmI PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.171e-22
Identity = 73/192 (38.02%), Postives = 111/192 (57.81%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEA 582
            A+TP +D    + P    L+ A G  VGLP +  MGNSEVGH  +GAGR+  Q    +  A++ G+  Q+E   N I  + + G  +H++GL+S GGVHS  D +   ++ A+ RGA++I LH   DGRD    S+   ++  ++  A+L GKG   +IAS  GR Y  MDR +N+W+ V++ +D     +A
Sbjct:   29 ANTPVLDGLMANQPNT--LISASGMDVGLP-DGQMGNSEVGHTNIGAGRVVYQDLTRITKAISDGEFQQNETLVNAIDKAVKAGKAVHIMGLMSPGGVHSHEDHIYAAVEMAAARGAEKIYLHCFLDGRDTPPRSAENSLKNFQELFAKL-GKG---RIASLVGR-YYAMDR-DNNWERVQKAYDLMTEAKA 211          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_VIBF1 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=gpmI PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.171e-22
Identity = 73/192 (38.02%), Postives = 111/192 (57.81%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEA 582
            A+TP +D    + P    L+ A G  VGLP +  MGNSEVGH  +GAGR+  Q    +  A++ G+  Q+E   N I  + + G  +H++GL+S GGVHS  D +   ++ A+ RGA++I LH   DGRD    S+   ++  ++  A+L GKG   +IAS  GR Y  MDR +N+W+ V++ +D     +A
Sbjct:   29 ANTPVLDGLMANQPNT--LISASGMDVGLP-DGQMGNSEVGHTNIGAGRVVYQDLTRITKAISDGEFQQNETLVNAIDKAVKAGKAVHIMGLMSPGGVHSHEDHIYAAVEMAAARGAEKIYLHCFLDGRDTPPRSAENSLKNFQELFAKL-GKG---RIASLVGR-YYAMDR-DNNWERVQKAYDLMTEAKA 211          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_ROSDO (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=gpmI PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.171e-22
Identity = 72/198 (36.36%), Postives = 104/198 (52.53%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFET--GTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTA 600
            ADTP MD    + P     L   G  VGLP+   MGNSEVGH  +GAGR+ A     +DLA+  G   Q+        + +   GT HL+G++SDGGVH  ++ +    K  ++     + +H LTDGRDV   S++G+ ET++  L +        +IA+  GR Y  MDR +N WD V + + A V G    + +A
Sbjct:   29 ADTPNMDRLMATCPHA--TLTTFGPDVGLPS-GQMGNSEVGHTNIGAGRVVAMDLGQIDLAIEEGLFAQNSRLRAFIVTLQDSGGTAHLMGVVSDGGVHGHINHMIAAAKALADENIP-VVIHALTDGRDVAPRSALGYFETLQAALPD------GVEIATVTGR-YFAMDR-DNRWDRVSKAYQAIVTGTGRKAASA 214          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_NATPD (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=gpmI PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.171e-22
Identity = 78/193 (40.41%), Postives = 103/193 (53.37%), Query Frame = 1
Query:   13 ADTPTMDSF-NKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFN--YIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEA 582
            ADTP  D+   + A G+   L  HG +VGLP +  MGNSEVGH  +GAGR+  Q +  V   + +G    +E     +       G +H +GL+SDGGVHS    L  L+  A+ERG + +  H  TDGRD    S VGF+E    DLA    +     +A+  GR Y  MDR EN W+  KR +DA V  EA
Sbjct:   25 ADTPAFDALAERGATGQ---LETHGRSVGLP-DGQMGNSEVGHLNIGAGRVVKQDSTRVTDDIDAGVFADNEALARAFDHADDHDGRVHFMGLVSDGGVHSYQSHLHALVDLAAERGVEAV-THAFTDGRDTAPKSGVGFIE----DLAATVEEAGTGDVATVCGR-YYAMDRDEN-WERTKRAYDAIVHREA 206          
The following BLAST results are available for this feature:
BLAST of EY659269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 272
Match NameE-valueIdentityDescription
GPMI_BACSK8.734e-2337.822,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_DESAP8.735e-2337.562,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_COXBU8.964e-2338.742,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_COXBR8.964e-2338.742,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CLOPS8.964e-2339.252,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CLOP18.964e-2339.252,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_VIBFM1.171e-2238.022,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_VIBF11.171e-2238.022,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ROSDO1.171e-2236.362,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_NATPD1.171e-2240.412,3-bisphosphoglycerate-independent phosphoglycera... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659269 ID=EY659269; Name=EY659269; organism=Citrus sinensis; type=EST; length=934bp
CCACGCGTCCGCGCCGACACTCCCACCATGGACTCTTTCAATAAGTCTGC
CCCTGGGAGGTGGAGGTTGCTCCGAGCTCACGGTAGTGCTGTGGGGCTTC
CAACTGAAGATGACATGGGTAACAGTGAAGTCGGTCATAATGCACTCGGT
GCTGGTCGCATTTTTGCTCAAGGTGCAAAGCTTGTTGACCTTGCTCTGGC
CTCTGGGAAAATCTATCAAGATGAGGGATTTAATTACATTAAGCCATCTT
TTGAAACCGGCACATTGCACCTTATTGGGTTACTGAGTGATGGTGGAGTA
CACTCTAGGCTTGATCAACTTCAGTTGTTGCTAAAAGGAGCTAGTGAGCG
TGGTGCTAAAAGAATTCGTCTTCATATTCTTACTGACGGGCGTGATGTTT
TGGATGGTTCAAGCGTAGGATTCGTAGAAACTATTGAGAAAGATCTTGCA
GAATTGCGTGGGAAAGGTGTTGACGCGCAGATTGCATCTGGAGGAGGCCG
CATGTACGTCACGATGGACCGTTATGAGAATGATTGGGATGTTGTCAAAC
GATGATGGGATGCCCAAGTTCTTGGAGAAGCTCACACAAGTTTAACAGCG
CCGTTGAAGCTGTCAAAAAACTAAGGGAACAGCCCAATGCCAATGACCAG
TACTTACCTNCATTTGTCATTGTTGATGAAAATGGAAAAGCTGTGGGTCC
AATAGTANATGGTGATGCNAGTGTAACTTTCAACTTCGAGCTGATCGAAT
GGTATGCTTGCTAAGCCCCTGATATGAAGATTTGACAATTGGATCCGAGT
CGGGTCCCTAAATNCGTATGCTGGATGCTCATATGATGGGGGAGTGAAAC
TCCAGTCATACCNTGNNGTCTCTCGAGATGACAGACTCTGGGAATATTAT
GCATAATGGGGTCCGACTTTGCTGCANGAGATGT
back to top