EY659269

Overview
NameEY659269
Unique NameEY659269
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_COXBN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=gpmI PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.406e-22
Identity = 83/222 (37.39%), Postives = 116/222 (52.25%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYI--KPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAH---TSLTAPLKLSKN*GNSPMPMTSTYLH 663
            A+TPT+D   +  P    LL A G AVGLP +  MGNSEVGH  +G GR   Q    +D A+ASG+ Y++        K       +H++GLLS GGVHSR +Q+  L++ A   G K+I LH + DGRD    S++  +E I  D     G G   +IAS  GR Y  MDR +  WD  ++ +D    G A     +    L L+   GN+   ++ T +H
Sbjct:   34 ANTPTLDKLFRHYPHT--LLEASGRAVGLP-DGQMGNSEVGHLHIGGGRKVPQDLTRIDAAIASGEFYENPALIEALEKAKALNKAVHILGLLSPGGVHSRDNQIAALVELAHRCGIKKIYLHAILDGRDTPPKSALLSIEKI-TDQFHAYGNG---KIASLIGR-YYAMDR-DKRWDRTEKAYDLLTQGTAQFHAPTAKEGLMLAYEQGNTDEFVSPTSIH 246          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_PARD8 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=gpmI PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 7.171e-22
Identity = 74/191 (38.74%), Postives = 99/191 (51.83%), Query Frame = 1
Query:   19 TPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQD----EGFNYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGE 579
            TP  D   K+ P     L+A G  VGLP +  MGNSEVGH  +GAGRI  Q    +++A     I ++      ++Y K + +   +H +GL+SDGGVHS L+ L  L   A E G  +  +H   DGRD    S  GF+E +E  L    GK     IAS  GR Y  MDR +  W+ VK  +D  V G+
Sbjct:   29 TPYWDELLKTYPASQ--LQASGENVGLP-DGQMGNSEVGHLNIGAGRIVYQDLVKINIACRENTIMENPEIKRAYSYAKENNKQ--IHFMGLVSDGGVHSSLEHLLKLTDIAKEYGISKAYVHCFMDGRDTDPKSGKGFIEELENHLKTTGGK-----IASIIGR-YYAMDR-DKRWERVKEAYDLLVEGK 207          

HSP 2 Score: 25.7942 bits (55), Expect = 7.171e-22
Identity = 16/44 (36.36%), Postives = 22/44 (50.00%), Query Frame = 3
Query:  612 VKKLREQ--PNANDQYLPXFVIVDENGKAVGPIVXGDASVTFNF 737
            VK + E       D+++   V V ENGK V  I  GD  + FN+
Sbjct:  215 VKAMEESYAEGVTDEFIKPIVHV-ENGKPVAVIEEGDVVIFFNY 257          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_ENT38 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Enterobacter sp. (strain 638) GN=gpmI PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.589e-22
Identity = 75/191 (39.27%), Postives = 106/191 (55.50%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFN-YIKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGE 579
            A TP MD+     P    L+ A G  VGLP +  MGNSEVGH  LGAGRI  Q    +D+ +     + +      +  +   G  +H++GLLS GGVHS  D +  +++ A+ERGA++I LH   DGRD    S+   ++T E   AEL GKG   ++AS  GR Y  MDR +N WD V++ +D   + +
Sbjct:   30 AKTPVMDALWAQRPHT--LIDASGLEVGLP-DRQMGNSEVGHVNLGAGRIVYQDLTRLDVEIKERTFFSNPTLTGAVDKAVSAGKAVHIMGLLSAGGVHSHEDHILAMVEMAAERGAEKIYLHAFLDGRDTPPRSAKSSLQTFEDKFAEL-GKG---RVASIIGR-YYAMDR-DNRWDRVEQAYDLMTMAK 211          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_CLOAB (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium acetobutylicum GN=gpmI PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.589e-22
Identity = 74/198 (37.37%), Postives = 109/198 (55.05%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSF--ETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTA 600
            A  P  D +  + P     L A G +VGLP +  MGNSEVGH  +GAGRI  Q    +  A+  G  +++   N    +      TLHL+GLLS GGVHS  + L+ LL+ A ++  K++ +H   DGRDV   S+  F++ IE  + E+ G G   +IA+  GR Y  MDR +N W+  +  ++A VLG+   + +A
Sbjct:   28 ASKPNFDKYFNNYPHTH--LGASGLSVGLP-DGQMGNSEVGHLNIGAGRIVYQSLTKITKAIEDGDFFKNAALNKAVNNVLENDSTLHLMGLLSPGGVHSHTNHLKGLLQLAKKKNVKKVFVHAFLDGRDVPPSSAKEFIKDIEDYMNEI-GLG---EIATVSGR-YYAMDR-DNRWEREELAYNAMVLGKGEEAESA 216          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_CHRSD (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=gpmI PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.589e-22
Identity = 79/198 (39.90%), Postives = 103/198 (52.02%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNY-IKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTA 600
            A TP MD+  +  P    LL   G  VGLP +  MGNSEVGH  LGAGRI  Q    +  A+   ++  +      I  +   G  +HL+GLLS GGVHS  D +  +   A+ERGAK + LH   DGRD    S+   +E     LAEL G   +A +AS  GR Y  MDR +N WD V++ +   V GE     T+
Sbjct:   34 ARTPVMDALKQRYPST--LLHTDGKYVGLP-DGQMGNSEVGHMNLGAGRIVYQDFTRITKAIEDNELASNPVLTAPIDAAVAAGRAVHLLGLLSPGGVHSHEDHILAVAALAAERGAKHVYLHAFLDGRDTAPKSARASLERANARLAELFGAD-NAYVASIVGR-YYAMDR-DNRWDRVEQAYRVIVEGEGSQVATS 225          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_SHELP (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=gpmI PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.911e-22
Identity = 74/192 (38.54%), Postives = 103/192 (53.65%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF--NYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEA 582
            A+TP +D  NK  P    L+   G  VGLP +  MGNSEVGH  +G+GR+  Q    +  ++  G+   +  F     K     G +H++GLLS GGVHS    +Q + K A  RGAK++ LH   DGRD    S+ G ++   +  AEL G G   +IAS  GR Y  MDR +N WD V + ++    G+A
Sbjct:   30 ANTPVLDRLNKEYPNS--LISGSGLDVGLP-DGQMGNSEVGHINIGSGRVVYQELTRIGKSIEDGEFDSNPAFVDAVDKAIAADGAVHIMGLLSPGGVHSHESHIQAMCKMAVARGAKQVYLHAFLDGRDTPPRSAKGSLQAFNELFAEL-GTG---RIASLIGR-YYAMDR-DNRWDRVSQAYELITQGKA 212          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_PROM3 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Prochlorococcus marinus (strain MIT 9303) GN=gpmI PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.911e-22
Identity = 70/178 (39.33%), Postives = 101/178 (56.74%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSFET--GTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWD 540
            A+TP MD+   + P    L+ A G+AVGLP ++ MGNSEVGH  +GAGR+  Q    +   + +G++ Q      +        GTLHL+GL SDGGVHS ++ L  LL  A+  G  ++ LH++TDGRD    S+  ++  IE D     G G   ++AS  GR Y  MDR ++ W+
Sbjct:   40 AETPIMDALWHAYPHT--LIEASGAAVGLP-DNQMGNSEVGHLTIGAGRVIRQELVRISETVQTGRLGQTPALIALAERLRKSDGTLHLLGLCSDGGVHSHINHLCGLLHWAAAAGLNKVALHLITDGRDTPTQSASNYLHQIE-DAINASGVG---ELASLCGR-YWAMDR-DHRWE 208          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_ACHLI (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Acholeplasma laidlawii (strain PG-8A) GN=gpmI PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.911e-22
Identity = 72/192 (37.50%), Postives = 100/192 (52.08%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF--NYIKPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERG-AKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGE 579
            ADT  +D+  K  P     L   G AVGLP E  MGNSEVGH  LGAGRI  Q    +++A+  G  ++++ F             LH++GL+SDGGVH+++     L   A ++    R  LH+ TDGRD    S  GFV+T+               +A+  GR Y  MDR +N+WD V+  +DA  LG+
Sbjct:   28 ADTTYLDNLLKEYPNS--TLVTSGEAVGLP-EGQMGNSEVGHLNLGAGRIVWQSLSRINVAIKDGSFFKNQAFLDAVAHAKKHNSKLHIMGLVSDGGVHAQMGHYLALYDFAKQQNILDRTYLHVFTDGRDTPQESGYGFVKTL---------VDYGFNVATVSGRFY-AMDR-DNNWDRVQLAFDAMTLGD 205          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_PSYA2 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.294e-21
Identity = 71/194 (36.60%), Postives = 104/194 (53.61%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRG--KGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEA 582
            AD P +D   +  P    L+ A G  VGLP +   GNSEVGH  LGAGR+  Q +  +   +AS   Y++E   N +K +   G  +H++GLLSDGGVHS  D ++ +   A   GAK + +H   DGRD    S+  ++  +   + +L    +    QIAS  GR Y  MDR +N WD V++ ++    G+A
Sbjct:   54 ADMPNLDKIYEQYPHG--LISASGEDVGLP-DGQFGNSEVGHMNLGAGRVLYQDSTRISSEVASRDFYKNEALVNAVKAANTLGGNVHIMGLLSDGGVHSNQDHIEAMCHSALVHGAKNVFVHCFLDGRDTPPKSADKYINRLRDHIIKLNAHYESGRVQIASIIGR-YYAMDR-DNRWDRVQKAYELITEGKA 242          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_PSEMY (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas mendocina (strain ymp) GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.294e-21
Identity = 73/182 (40.11%), Postives = 100/182 (54.95%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNY-IKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR 552
            A TP  D    + P    L+   G  VGLP +  MGNSEVGH  LGAGR+  Q    V  A+  G+ + +   N  +  +   G  +H++GLLSDGGVHS  D +  + + A+ RGA++I LH   DGRD    S+   +E ++   A L GKG   +IAS  GR Y  MDR +N WD V++
Sbjct:   30 ASTPVYDRLRATYPHG--LISGSGMDVGLP-DGQMGNSEVGHMNLGAGRVVYQDFTRVTKAIRDGEFFDNAAINQAVDKAVAAGKAVHILGLLSDGGVHSHQDHIVAMAELAARRGAEKIYLHAFLDGRDTPPKSAQPSIELLDAAFARL-GKG---RIASLTGR-YFAMDR-DNRWDRVEQ 202          
The following BLAST results are available for this feature:
BLAST of EY659269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 272
Match NameE-valueIdentityDescription
GPMI_COXBN3.406e-2237.392,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PARD87.171e-2238.742,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ENT387.589e-2239.272,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CLOAB7.589e-2237.372,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CHRSD7.589e-2239.902,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHELP9.911e-2238.542,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PROM39.911e-2239.332,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ACHLI9.911e-2237.502,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSYA21.294e-2136.602,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEMY1.294e-2140.112,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659269 ID=EY659269; Name=EY659269; organism=Citrus sinensis; type=EST; length=934bp
CCACGCGTCCGCGCCGACACTCCCACCATGGACTCTTTCAATAAGTCTGC
CCCTGGGAGGTGGAGGTTGCTCCGAGCTCACGGTAGTGCTGTGGGGCTTC
CAACTGAAGATGACATGGGTAACAGTGAAGTCGGTCATAATGCACTCGGT
GCTGGTCGCATTTTTGCTCAAGGTGCAAAGCTTGTTGACCTTGCTCTGGC
CTCTGGGAAAATCTATCAAGATGAGGGATTTAATTACATTAAGCCATCTT
TTGAAACCGGCACATTGCACCTTATTGGGTTACTGAGTGATGGTGGAGTA
CACTCTAGGCTTGATCAACTTCAGTTGTTGCTAAAAGGAGCTAGTGAGCG
TGGTGCTAAAAGAATTCGTCTTCATATTCTTACTGACGGGCGTGATGTTT
TGGATGGTTCAAGCGTAGGATTCGTAGAAACTATTGAGAAAGATCTTGCA
GAATTGCGTGGGAAAGGTGTTGACGCGCAGATTGCATCTGGAGGAGGCCG
CATGTACGTCACGATGGACCGTTATGAGAATGATTGGGATGTTGTCAAAC
GATGATGGGATGCCCAAGTTCTTGGAGAAGCTCACACAAGTTTAACAGCG
CCGTTGAAGCTGTCAAAAAACTAAGGGAACAGCCCAATGCCAATGACCAG
TACTTACCTNCATTTGTCATTGTTGATGAAAATGGAAAAGCTGTGGGTCC
AATAGTANATGGTGATGCNAGTGTAACTTTCAACTTCGAGCTGATCGAAT
GGTATGCTTGCTAAGCCCCTGATATGAAGATTTGACAATTGGATCCGAGT
CGGGTCCCTAAATNCGTATGCTGGATGCTCATATGATGGGGGAGTGAAAC
TCCAGTCATACCNTGNNGTCTCTCGAGATGACAGACTCTGGGAATATTAT
GCATAATGGGGTCCGACTTTGCTGCANGAGATGT
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