EY659269

Overview
NameEY659269
Unique NameEY659269
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_MYCHJ (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mycoplasma hyopneumoniae (strain J / ATCC 25934 / NCTC 10110) GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.294e-21
Identity = 76/200 (38.00%), Postives = 111/200 (55.50%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNY-IKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTAPL 606
            A TP  D   +  P    L+ A G  VGLP E  MGNSEVGH  +GAG +   G  +++ AL +GK +++E F    + S +TG  L ++GL S GGVHS  D L  L+  A+  G K++ LH+  DGRDV   S   +++ +   L        D +IAS  GR Y +MDR +  +D V+  ++A +LG+A  + T P+
Sbjct:   27 AKTPVFDRLFQEYPNS--LIAASGQEVGLP-EGQMGNSEVGHLNIGAGFVVYTGISIINNALKTGKFFENEKFILAFRHSIKTGFPLQIMGLFSPGGVHSHQDHLFALIDFAANFGVKKLNLHLFGDGRDVGPKSIKPWIKMLNLKLKNYE----DYKIASISGRFY-SMDR-DKMFDRVELGYNA-LLGKAENTFTDPI 216          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_HAHCH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Hahella chejuensis (strain KCTC 2396) GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.294e-21
Identity = 80/192 (41.67%), Postives = 102/192 (53.12%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNY-IKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEA 582
            A+TP  D  +   P    L+   G AVGLP E  MGNSEVGH  LGAGRI  Q    +   +  G   Q+   +  I  +   G  +HL+GLLS GGVHS  D +    K A ERGA ++ +H   DGRD    S+   +E  +K L EL G G   ++AS  GR Y  MDR +N WD V+  +D   LGEA
Sbjct:   30 ANTPFWDQISSQNPHV--LIHTSGMAVGLP-EGQMGNSEVGHMNLGAGRIVYQNFTRITKDIEDGVFAQNPAISSAIDKAVSNGKAVHLLGLLSPGGVHSHEDHILAACKVARERGADKVFVHAFLDGRDTPPRSAQPSLERTDKLLKEL-GCG---RVASIIGR-YYAMDR-DNRWDRVQAAYDLLTLGEA 212          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_SHEAM (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=gpmI PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.578e-21
Identity = 69/197 (35.03%), Postives = 102/197 (51.78%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYIKPSF--ETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLT 597
            A+TP +D+   + P    L+   G  VGLP +  MGNSEVGH  LG+GRI  Q    +  A+  G+   +        +     G +H++GLLS GGVHS  + ++ +++ A++RGA ++ LH   DGRD    S+ G +    +  A L       +IAS  GR Y  MDR +N WD V + +D    G+   S T
Sbjct:   29 ANTPVLDNLKANYPNG--LISGSGHDVGLP-DGQMGNSEVGHINLGSGRIVYQELTRISKAIEDGEFDDNPALCKAVDAAIAANGAVHIMGLLSPGGVHSHEEHIEAMIRMAAKRGATKVYLHAFLDGRDTPPRSAKGSLAHFTELFASLNA----GRIASIVGR-YFAMDR-DNRWDRVVQAYDLITQGKGKHSAT 216          

HSP 2 Score: 27.335 bits (59), Expect = 1.578e-21
Identity = 16/54 (29.63%), Postives = 29/54 (53.70%), Query Frame = 3
Query:  576 RSSHKFNSAVEAVKKLREQPNANDQYLPXFVIVDENGKAVGPIVXGDASVTFNF 737
            +  H   +AV+A++    + + ND+++    IVD NG +V  +   DA +  NF
Sbjct:  210 KGKHSATNAVDALEAAYAR-DENDEFVAPTAIVDANGDSVS-LNDNDALIFMNF 261          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_RHOS5 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.691e-21
Identity = 77/198 (38.89%), Postives = 105/198 (53.03%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYI-KPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTSLTA 600
            A+TPT D    + P     L  HG  VGLP    MGNSEVGH  +GAGR+ A     +DLA+  G   ++    ++I K   + GT HL+G++SDGGVH  +  L   ++  +  G   + +H +TDGRDV   S+ GFV+     LAE    G  A I +  GR Y  MDR +  WD VKR  DA + G+   +  A
Sbjct:   29 ANTPTFDRLMATCPNA--TLITHGPDVGLP-RGQMGNSEVGHTNIGAGRVVAMDLGAIDLAIEEGTFARNPALCDFIAKVKAKGGTAHLMGVVSDGGVHGHIQHLIAAVEVIAASGVP-VVIHAITDGRDVAPTSAGGFVQ----QLAEALPAG--ASIGTVIGR-YWAMDR-DKRWDRVKRASDAMLHGQGERAADA 214          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_PHOPR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Photobacterium profundum GN=gpmI PE=3 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.691e-21
Identity = 70/181 (38.67%), Postives = 102/181 (56.35%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNY-IKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVK 549
            A+TP MDS   +      L+ A G  VGLP +  MGNSEVGH  +GAGR+  Q    +  ++A G  +++E     +  +   G  +H++GL+S GGVHS  D +   ++ A++RGA++I LH   DGRD    S+   +E  +   AEL GKG  A +    GR Y  MDR +N+WD V+
Sbjct:   29 ANTPVMDSLIANEANT--LISASGFDVGLP-DGQMGNSEVGHTNIGAGRVVYQDLTRITKSIADGDFFENEALTTAMDKAINAGKAVHIMGLMSPGGVHSHEDHIAAAIEMAAKRGAEKIYLHCFLDGRDTPPRSAQNSLERFDALFAEL-GKGRTASLV---GR-YYAMDR-DNNWDRVE 200          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_PARDP (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Paracoccus denitrificans (strain Pd 1222) GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.691e-21
Identity = 70/192 (36.46%), Postives = 101/192 (52.60%), Query Frame = 1
Query:   10 RADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGFNYI--KPSFETGTLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGE 579
            +A TP  D   +  P     L   G  VGLP +  MGNSEVGH  +GAGR+ A     +DLA+  G  Y++        K     GT HL+G++SDGGVH  +  +    +  +++G   + +H++TDGRDV   S++GFV  +  +L E       A+I +  GR Y  MDR +N W+ V R + A V  E
Sbjct:   28 QARTPNFDRLMRGCPHG--TLVTFGPDVGLP-KGQMGNSEVGHTNIGAGRVVAMDLGQIDLAIEDGSFYENAALGEFIRKLKASGGTAHLMGVVSDGGVHGHIQHVIAAARAVTDKGVP-VVIHVVTDGRDVPPQSAMGFVTELLGELPEA------ARIGTVVGR-YYAMDR-DNRWERVARAYAAMVRAE 207          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_HERA2 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=gpmI PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 2.051e-21
Identity = 68/195 (34.87%), Postives = 109/195 (55.90%), Query Frame = 1
Query:   13 ADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETGT-LHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGEAHTS 591
            A+TP ++ +  + P     L A G  VGLP E  +GNSEVGH  +GAG +  Q +  +  ++ SG+ +++  F   ++   E GT +HLIGL+  GGVH+    L  LL+  +++G     +H   DGRD L  S +G++  +++ ++++   GV  Q+AS  GR Y  MDR +  W+ V   + A V G  HT+
Sbjct:   29 ANTPNVNHWMATCPTTQ--LHASGLDVGLP-EGQIGNSEVGHLNIGAGLVVYQDSTRISESIKSGEFFENPAFLEAVQIVKERGTNMHLIGLIGRGGVHAYDIHLAGLLQLMAQQGVNHTYIHAFMDGRDTLPQSGLGYMRELQQTISQI---GV-GQVASVIGR-YYAMDR-DKRWERVGAAYAAMVEGVGHTA 214          

HSP 2 Score: 29.6462 bits (65), Expect = 2.051e-21
Identity = 14/51 (27.45%), Postives = 25/51 (49.02%), Query Frame = 3
Query:  585 HKFNSAVEAVKKLREQPNANDQYLPXFVIVDENGKAVGPIVXGDASVTFNF 737
            H  +  + A+++   +    D+++   VI D  G A+  I  GD  + FNF
Sbjct:  212 HTASDPISAIEQAYLRDARGDEFIEATVITDSAGVALPRISTGDVVICFNF 262          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_SALTY (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Salmonella typhimurium GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.208e-21
Identity = 75/193 (38.86%), Postives = 106/193 (54.92%), Query Frame = 1
Query:    7 VRADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGE 579
            + A TP MD+     P    L+ A G  VGLP +  MGNSEVGH  LGAGRI  Q    +D+ +     + +    N +  +   G  +H++GLLS GGVHS  D +  +++ A+ERGA++I LH   DGRD    S+   ++  E   A L GKG   ++AS  GR Y  MDR +N WD V++ +D   L +
Sbjct:   28 LNAKTPVMDALWAKRPHT--LIDASGLEVGLP-DRQMGNSEVGHVNLGAGRIVYQDLTRLDVEIKERTFFANPVLTNAVDQAKNAGKAVHIMGLLSAGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPRSAEASLKKFEDKFAAL-GKG---RVASIVGR-YYAMDR-DNRWDRVEKAYDLMTLAQ 211          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_SALTI (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Salmonella typhi GN=gpmI PE=3 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 2.208e-21
Identity = 75/193 (38.86%), Postives = 106/193 (54.92%), Query Frame = 1
Query:    7 VRADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGE 579
            + A TP MD+     P    L+ A G  VGLP +  MGNSEVGH  LGAGRI  Q    +D+ +     + +    N +  +   G  +H++GLLS GGVHS  D +  +++ A+ERGA++I LH   DGRD    S+   ++  E   A L GKG   ++AS  GR Y  MDR +N WD V++ +D   L +
Sbjct:   28 LNAKTPVMDALWAKRPHT--LIDASGLEVGLP-DRQMGNSEVGHVNLGAGRIVYQDLTRLDVEIKERTFFANPVLTNAVDQAKNAGKAVHIMGLLSAGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPRSAEASLKKFEDKFAAL-GKG---RVASIVGR-YYAMDR-DNRWDRVEKAYDLMTLAQ 211          
BLAST of EY659269 vs. ExPASy Swiss-Prot
Match: GPMI_SALPB (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=gpmI PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.208e-21
Identity = 75/193 (38.86%), Postives = 106/193 (54.92%), Query Frame = 1
Query:    7 VRADTPTMDSFNKSAPGRWRLLRAHGSAVGLPTEDDMGNSEVGHNALGAGRIFAQGAKLVDLALASGKIYQDEGF-NYIKPSFETG-TLHLIGLLSDGGVHSRLDQLQLLLKGASERGAKRIRLHILTDGRDVLDGSSVGFVETIEKDLAELRGKGVDAQIASGGGRMYVTMDRYENDWDVVKR*WDAQVLGE 579
            + A TP MD+     P    L+ A G  VGLP +  MGNSEVGH  LGAGRI  Q    +D+ +     + +    N +  +   G  +H++GLLS GGVHS  D +  +++ A+ERGA++I LH   DGRD    S+   ++  E   A L GKG   ++AS  GR Y  MDR +N WD V++ +D   L +
Sbjct:   28 LNAKTPVMDALWAKRPHT--LIDASGLEVGLP-DRQMGNSEVGHVNLGAGRIVYQDLTRLDVEIKERTFFANPVLTNAVDQAKNAGKAVHIMGLLSAGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPRSAEASLKKFEDKFAAL-GKG---RVASIVGR-YYAMDR-DNRWDRVEKAYDLMTLAQ 211          
The following BLAST results are available for this feature:
BLAST of EY659269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 272
Match NameE-valueIdentityDescription
GPMI_MYCHJ1.294e-2138.002,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_HAHCH1.294e-2141.672,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHEAM1.578e-2135.032,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_RHOS51.691e-2138.892,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PHOPR1.691e-2138.672,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PARDP1.691e-2136.462,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_HERA22.051e-2134.872,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SALTY2.208e-2138.862,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SALTI2.208e-2138.862,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SALPB2.208e-2138.862,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-C06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659269 ID=EY659269; Name=EY659269; organism=Citrus sinensis; type=EST; length=934bp
CCACGCGTCCGCGCCGACACTCCCACCATGGACTCTTTCAATAAGTCTGC
CCCTGGGAGGTGGAGGTTGCTCCGAGCTCACGGTAGTGCTGTGGGGCTTC
CAACTGAAGATGACATGGGTAACAGTGAAGTCGGTCATAATGCACTCGGT
GCTGGTCGCATTTTTGCTCAAGGTGCAAAGCTTGTTGACCTTGCTCTGGC
CTCTGGGAAAATCTATCAAGATGAGGGATTTAATTACATTAAGCCATCTT
TTGAAACCGGCACATTGCACCTTATTGGGTTACTGAGTGATGGTGGAGTA
CACTCTAGGCTTGATCAACTTCAGTTGTTGCTAAAAGGAGCTAGTGAGCG
TGGTGCTAAAAGAATTCGTCTTCATATTCTTACTGACGGGCGTGATGTTT
TGGATGGTTCAAGCGTAGGATTCGTAGAAACTATTGAGAAAGATCTTGCA
GAATTGCGTGGGAAAGGTGTTGACGCGCAGATTGCATCTGGAGGAGGCCG
CATGTACGTCACGATGGACCGTTATGAGAATGATTGGGATGTTGTCAAAC
GATGATGGGATGCCCAAGTTCTTGGAGAAGCTCACACAAGTTTAACAGCG
CCGTTGAAGCTGTCAAAAAACTAAGGGAACAGCCCAATGCCAATGACCAG
TACTTACCTNCATTTGTCATTGTTGATGAAAATGGAAAAGCTGTGGGTCC
AATAGTANATGGTGATGCNAGTGTAACTTTCAACTTCGAGCTGATCGAAT
GGTATGCTTGCTAAGCCCCTGATATGAAGATTTGACAATTGGATCCGAGT
CGGGTCCCTAAATNCGTATGCTGGATGCTCATATGATGGGGGAGTGAAAC
TCCAGTCATACCNTGNNGTCTCTCGAGATGACAGACTCTGGGAATATTAT
GCATAATGGGGTCCGACTTTGCTGCANGAGATGT
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