EY659263

Overview
NameEY659263
Unique NameEY659263
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659263 vs. ExPASy Swiss-Prot
Match: ETFB_BRAJA (Electron transfer flavoprotein subunit beta OS=Bradyrhizobium japonicum GN=etfB PE=3 SV=2)

HSP 1 Score: 283.878 bits (725), Expect = 8.646e-76
Identity = 149/229 (65.07%), Postives = 179/229 (78.17%), Query Frame = 1
Query:   31 MVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMNAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKLGL 717
            +V +KRVVDY VK+RVK D +GVE  NVKMSMNPF EIA+EEALR+KE G A+EVV VS+GPAQ  +T+RTGLAMGADRG+ V+A G + PL VAKILK + E E+PGLIILGKQAIDDD NQTGQM+A LL W Q TFASK  L+ E     V REVDGGL+T++L  PA++TTDLRLN+PRYA+LPNIM AK KPI + T  +  VDV + LEV++ TEP  RK G+
Sbjct:    4 LVPVKRVVDYNVKVRVKGDGSGVELANVKMSMNPFDEIAVEEALRLKEGGKATEVVVVSIGPAQASETIRTGLAMGADRGILVKAEGTVEPLAVAKILKKVAEEEQPGLIILGKQAIDDDSNQTGQMLAALLGWSQATFASK--LEVEGSDFKVTREVDGGLQTVKLKGPAIVTTDLRLNEPRYASLPNIMKAKKKPIAEKTVADYGVDVTARLEVLKTTEPAGRKAGV 230          
BLAST of EY659263 vs. ExPASy Swiss-Prot
Match: ETFB_PSEAE (Electron transfer flavoprotein subunit beta OS=Pseudomonas aeruginosa GN=etfB PE=3 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 9.259e-70
Identity = 133/229 (58.08%), Postives = 175/229 (76.42%), Query Frame = 1
Query:   31 MVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMNAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKLGL 717
            +VA+KRVVDY VK+RVK+D +GV+  NVKMSMNPFCEIA+EEA+R+KE G+A+E+VAVS+GP    + LRT LA+GADR + VE+  +L  L VAK+LK++V+ E+P L+ILGKQAID D NQTGQM+A L  + QGTFASKV +  +K    V RE+DGGL+T+ L+LPA++TTDLRLN+PRYA+LPNIM AK KP+   TP  L V   S ++ ++V  P  R  G+
Sbjct:    4 LVAVKRVVDYNVKVRVKADNSGVDLANVKMSMNPFCEIAVEEAVRLKEKGVATEIVAVSVGPTAAQEQLRTALALGADRAILVESNDELNSLAVAKLLKAVVDKEQPQLVILGKQAIDSDNNQTGQMLAALTGYAQGTFASKVEVAGDK--VNVTREIDGGLQTVALNLPAIVTTDLRLNEPRYASLPNIMKAKKKPLDVVTPDALGVSTASTVKTLKVEAPAARSAGI 230          
BLAST of EY659263 vs. ExPASy Swiss-Prot
Match: ETFB_PARDE (Electron transfer flavoprotein subunit beta OS=Paracoccus denitrificans GN=etfB PE=1 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 6.211e-66
Identity = 134/233 (57.51%), Postives = 167/233 (71.67%), Query Frame = 1
Query:   31 MVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAG----QLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMNAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKLGL 717
            +V +KR++DY VK RVKSD +GV+  NVKMSMNPF EIA+EEA+R+KE G A E++AVS+G  Q  +TLRT LAMGADR + V AA      + PL VAKIL ++   E   LII GKQAID+D N TGQM+A +L W Q TFASKV ++  K  A V REVDGGL+T+ + LPAV+T DLRLN+PRYA+LPNIM AK KP+ + T  +  VDV   LEV+ V EP  RK G+
Sbjct:    4 LVPVKRLIDYNVKARVKSDGSGVDLANVKMSMNPFDEIAVEEAIRLKEKGQAEEIIAVSIGVKQAAETLRTALAMGADRAILVVAADDVQQDIEPLAVAKILAAVARAEGTELIIAGKQAIDNDMNATGQMLAAILGWAQATFASKVEIEGAK--AKVTREVDGGLQTIAVSLPAVVTADLRLNEPRYASLPNIMKAKKKPLDEKTAADYGVDVAPRLEVVSVREPEGRKAGI 234          
BLAST of EY659263 vs. ExPASy Swiss-Prot
Match: ETFB_YEAST (Probable electron transfer flavoprotein subunit beta OS=Saccharomyces cerevisiae GN=YGR207C PE=1 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.940e-51
Identity = 112/236 (47.46%), Postives = 155/236 (65.68%), Query Frame = 1
Query:   31 MVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESG--LASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQ--LYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKV-VLDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMNAKSKPIKK--YTPQELNVDVKSDLEVIQVTEPPKRKLGL 717
            +V +KRVVD+ +K RV    TG+ET+ +K S+NPF +IA+EEA+RIKE    L     AVS+G A+  D LR  LA G D    +++ G+  + PL +AKILK++VE +   L+++GKQAIDDDCN TGQM+AGLL+WPQ T A+KV  LD  +    V RE+D G E +E  LP VITTDLRLN PRY  LP +M AK KPI+K         ++++  L+++ + EP  +  G+
Sbjct:   10 LVPVKRVVDFQIKPRVNKTLTGIETSGIKFSINPFDDIAVEEAIRIKEKNKSLVESTHAVSIGSAKAQDILRNCLAKGIDTCSLIDSVGKENIEPLAIAKILKAVVEKKGSNLVLMGKQAIDDDCNNTGQMLAGLLNWPQATNAAKVEFLDNGR--VQVTREIDDGEEVIEASLPMVITTDLRLNTPRYVGLPKLMKAKKKPIEKLDIAKDFPEINIEPQLKIVSMEEPKTKSPGV 243          
BLAST of EY659263 vs. ExPASy Swiss-Prot
Match: ETFB_SCHPO (Probable electron transfer flavoprotein subunit beta OS=Schizosaccharomyces pombe GN=SPAC1805.02c PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.642e-50
Identity = 107/239 (44.77%), Postives = 157/239 (65.69%), Query Frame = 1
Query:   31 MVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKES--GLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAG-QLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMNAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRKLGLYYLLVKS 738
            +V +KR +DY +K R+ + +T V+ +  KMS+NPFC+IA+EEA+R+KE+      + + V+ G       LR  LA G  R   +     +L PL+VAK+LK+ VE EK  L++LGKQAIDDD +QTG M+A +L WPQ T ASKV ++ +K   +V RE+DGG ETL   LPA+ITTDLRLN PR+A L  +M A+  P+ K +P++L V +   L+ + V+EP +++     ++VKS
Sbjct:    7 LVGVKRTLDYMLKPRINATKTAVDLSGQKMSINPFCDIAVEEAIRMKETLKNRIEDTLVVTAGQTSSEPILRQCLAKGIGRAALINVGEKELEPLSVAKLLKATVEKEKSNLVLLGKQAIDDDAHQTGGMLAAMLGWPQFTSASKVRIEGDK--VIVTREIDGGEETLSSTLPAIITTDLRLNVPRFANLAKVMKARKAPLGKMSPEDLGVTIDQRLQTVSVSEPVQKRQN---IMVKS 240          
BLAST of EY659263 vs. ExPASy Swiss-Prot
Match: ETFB_METME (Electron transfer flavoprotein subunit beta OS=Methylophilus methylotrophus GN=etfB PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.159e-26
Identity = 71/212 (33.49%), Postives = 120/212 (56.60%), Query Frame = 1
Query:   31 MVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLAS-EVVAVSMGPAQCVDTLRTGLAMGADRGVHV--EAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGG-LETLELDLPAVITTDLRLNQPRYATLPNIMNAKSKPIKKYTPQELNV 654
            +VA+K+         ++ D   V+ + +   +N + + +LEEA++IKES     EVV VS+GP +  ++LR  LA GADR V V  +AA     + V +IL  +++ E P ++  G Q+ D     TG  VA  L+WP     + +        A++ RE++GG L+ +E++ PAV+T  L +N+PRYA+L  I  A +KPI++ +  ++ +
Sbjct:    4 LVAVKQTAALEEDFEIREDGMDVDEDFMMYDLNEWDDFSLEEAMKIKESSDTDVEVVVVSVGPDRVDESLRKCLAKGADRAVRVWDDAAEGSDAIVVGRILTEVIKKEAPDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVADLQYKPGDNKAVIRRELEGGMLQEVEINCPAVLTIQLGINKPRYASLRGIKQAATKPIEEVSLADIGL 215          
BLAST of EY659263 vs. ExPASy Swiss-Prot
Match: ETFB_BACSU (Electron transfer flavoprotein subunit beta OS=Bacillus subtilis GN=etfB PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.812e-23
Identity = 72/233 (30.90%), Postives = 128/233 (54.94%), Query Frame = 1
Query:   34 VAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYP---LTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMNAKSKPIKKYTPQELNV---DVKSDLEVIQVTEPPKRKLG 714
            V +KR  D   KI +++ +  ++ +  +  +NP+ E A+EEA+++KE      + AV++G  +    LRT LAMG D+ V +     L      +++++L   ++ ++  LI+ G  AID    Q    +A LL  P  T  +K+ ++     A  ER+V+G +E ++  LP ++T    LN+PRY +LP IM AK KP+++    +L++   D +  L+ I+   PPK++ G
Sbjct:    5 VLMKRTFDTEEKIVIETGK--IQDDGAEWIINPYDEYAIEEAIQLKEKH-GGTITAVTVGGEEAEKELRTALAMGCDQAVLINIEDDLDEPDQYSISQVLYHYMKDQEFDLILGGNVAIDGGSGQVAPRLAELLDIPCITTITKLEINGTD--AEAERDVEGDVEKIKTTLPLLVTAQQGLNEPRYPSLPGIMKAKKKPLEELELDDLDLDEEDAEPKLKTIERFLPPKKEAG 232          
BLAST of EY659263 vs. ExPASy Swiss-Prot
Match: ETFB_CLOTS (Electron transfer flavoprotein subunit beta OS=Clostridium thermosaccharolyticum GN=etfB PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.471e-22
Identity = 79/239 (33.05%), Postives = 118/239 (49.37%), Query Frame = 1
Query:   31 MVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVE----AAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMNA-KSKPIKKYTPQELNVDVK------SDLEVIQVTEPPKRKLG 714
            +V IK+V D   ++R+      +    V   +NP  + ALEEA+RI+E  +  +V  +SMGP Q    LR  LAMGAD    +     A    Y    AK L   +E  +  ++  G+QAID D  Q G  +A  L  PQ T+  KV ++ +K   +VER ++ G E +E+  P ++T    LN PRY ++  I NA   K +K  T  +L VD        S  +V+  + P   + G
Sbjct:    4 LVLIKQVPD-TNEVRIDPVTKTLIREGVPSIINPDDKNALEEAIRIREK-VGGKVTVISMGPTQAEVALREALAMGADEAYLLTDRAFAGADTY--ATAKALSKAIEKFQYDIVFCGRQAIDGDTAQVGPQIAEQLDIPQVTYVRKVEIEGDK--LIVERALEDGYEIIEVKTPVLLTAIKELNVPRYPSIKGIFNAYNKKEVKILTADDLEVDKNELGLKGSPTKVVATSTPNTERAG 236          
BLAST of EY659263 vs. ExPASy Swiss-Prot
Match: ETFB_MEGEL (Electron transfer flavoprotein subunit beta OS=Megasphaera elsdenii GN=etfB PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.020e-20
Identity = 81/246 (32.93%), Postives = 120/246 (48.78%), Query Frame = 1
Query:   31 MVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGAD----------RGVHVEAAGQLYPLTVA-KILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMNAKSKPIKKYTPQELNVD------VKSDLEVIQVTEPPKRKLGL 717
            +V +K+V D A ++++   +  V    V    NPF + ALE AL +K++    ++  +SMGP Q  D LR GLAMGAD           G    A G  Y L  A K L +   +E+  +I+ GKQAID D  Q G  +A  L  PQ T+A  + ++ +K    V++E + G    E   P +IT    LN+PR+ T+   M AK + I       +  D        S  +V ++  PP+R  GL
Sbjct:    4 LVCVKQVPDTA-EVKIDPVKHTVIRAGVPNIFNPFDQNALEAALALKDADKDVKITLLSMGPDQAKDVLREGLAMGADDAYLLSDRKLGGSDTLATG--YALAQAIKKLAADKGIEQFDIILCGKQAIDGDTAQVGPQIACELGIPQITYARDIKVEGDK--VTVQQENEEGYIVTEAQFPVLITAVKDLNEPRFPTIRGTMKAKRREIPNLDAAAVAADDAQIGLSGSPTKVRKIFTPPQRSGGL 244          
BLAST of EY659263 vs. ExPASy Swiss-Prot
Match: ETFB_CLOAB (Electron transfer flavoprotein subunit beta OS=Clostridium acetobutylicum GN=etfB PE=3 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 8.788e-20
Identity = 67/211 (31.75%), Postives = 110/211 (52.13%), Query Frame = 1
Query:   31 MVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHV--EAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMNAKSKPIKKYTPQELNVD 657
            +V +K+V D A ++R+   +  +    V   +NP  + ALEEAL +K++   + V  +SMGP Q  + L   LAMGAD  V +   A G    L  +  + + ++  K  ++  G+QAID D  Q G  +A  L  PQ T+  KV +D +     + +  + G E +E+  P ++T    LN PRY ++  I  A  K +K +T  +++VD
Sbjct:    4 VVCLKQVPDTA-EVRIDPVKGTLIREGVPSIINPDDKNALEEALVLKDN-YGAHVTVISMGPPQAKNALVEALAMGADEAVLLTDRAFGGADTLATSHTIAAGIKKLKYDIVFAGRQAIDGDTAQVGPEIAEHLGIPQVTYVEKVEVDGD--TLKIRKAWEDGYEVVEVKTPVLLTAIKELNVPRYMSVEKIFGAFDKEVKMWTADDIDVD 210          
The following BLAST results are available for this feature:
BLAST of EY659263 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
ETFB_BRAJA8.646e-7665.07Electron transfer flavoprotein subunit beta OS=Bra... [more]
ETFB_PSEAE9.259e-7058.08Electron transfer flavoprotein subunit beta OS=Pse... [more]
ETFB_PARDE6.211e-6657.51Electron transfer flavoprotein subunit beta OS=Par... [more]
ETFB_YEAST1.940e-5147.46Probable electron transfer flavoprotein subunit be... [more]
ETFB_SCHPO1.642e-5044.77Probable electron transfer flavoprotein subunit be... [more]
ETFB_METME2.159e-2633.49Electron transfer flavoprotein subunit beta OS=Met... [more]
ETFB_BACSU3.812e-2330.90Electron transfer flavoprotein subunit beta OS=Bac... [more]
ETFB_CLOTS2.471e-2233.05Electron transfer flavoprotein subunit beta OS=Clo... [more]
ETFB_MEGEL3.020e-2032.93Electron transfer flavoprotein subunit beta OS=Meg... [more]
ETFB_CLOAB8.788e-2031.75Electron transfer flavoprotein subunit beta OS=Clo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-B10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659263 ID=EY659263; Name=EY659263; organism=Citrus sinensis; type=EST; length=899bp
TCGGCAACAACGGCAGCCGAAATGATAGAAATGGTGGCAATAAAGCGAGT
CGTTGACTACGCCGTCAAGATCAGGGTGAAATCCGACAGGACAGGAGTGG
AGACAAACAACGTTAAGATGTCGATGAACCCCTTTTGCGAGATAGCGCTG
GAGGAGGCTCTGAGGATCAAGGAATCTGGATTGGCTTCCGAGGTTGTCGC
CGTCAGCATGGGCCCCGCCCAGTGCGTTGATACTCTACGGACGGGTTTAG
CTATGGGTGCTGATAGAGGAGTCCACGTGGAGGCTGCCGGTCAGCTGTAT
CCTTTGACTGTTGCCAAGATTTTGAAGAGCCTTGTTGAGGTTGAGAAGCC
TGGCTTGATTATTCTGGGAAAGCAGGCAATTGATGATGACTGCAATCAAA
CAGGGCAAATGGTTGCAGGGCTACTCAGCTGGCCGCAGGGAACCTTTGCT
TCTAAGGTTGTGCTGGATAAGGAAAAACAATTAGCAATGGTGGAGAGAGA
AGTAGATGGTGGTCTTGAGACTTTAGAATTGGATTTACCAGCTGTAATCA
CCACTGATTTGAGACTCAACCAACCGAGGTACGCGACACTCCCCAACATA
ATGAACGCAAAATCGAAACCAATAAAGAAATATACTCCCCAGGAGCTAAA
CGTGGATGTCAAATCTGATTTGGAGGTGATTCAAGTAACAGAACCTCCCA
AGAGAAAGCTGGGGTTATATTATCTTCTGGTGAAGAGCTCATTNGACAGC
TAAAAATGAAGCCCGCGTCATTTAAACTTTCTTTGTAACTGTTATTCCCA
TCGAAATACTAGAACAAAAATTAAGAACTTCAGGCGTCAAATAAATAGCC
TTAGTTCAAATAGAGTATGGCCTCAAAATGCAGATTGGCCTGCCATGCT
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