EY659263

Overview
NameEY659263
Unique NameEY659263
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659263 vs. ExPASy Swiss-Prot
Match: ETFB_MYCTU (Electron transfer flavoprotein subunit beta OS=Mycobacterium tuberculosis GN=etfB PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.298e-18
Identity = 64/216 (29.63%), Postives = 109/216 (50.46%), Query Frame = 1
Query:   31 MVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKES----GLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAK---ILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMNAKSKPIKKYTPQELNVD 657
            +V IK+V D   + ++      ++       ++   E A+EEAL+I+E     G+   V  ++ GP +  + +R  L+MGAD+ VH++  G      +     + ++L  +E   L+I G ++ D        ++A  L  PQ T   KV ++  K     ERE D G+ TLE  LPAVI+ + ++N+PR+ +   IM AK K +   T  E+ V+
Sbjct:    5 VVLIKQVPDTWSERKLTDGDFTLDREAADAVLDEINERAVEEALQIREKEAADGIEGSVTVLTAGPERATEAIRKALSMGADKAVHLKDDGMHGSDVIQTGWALARALGTIEGTELVIAGNESTDGVGGAVPAIIAEYLGLPQLTHLRKVSIEGGKITG--ERETDEGVFTLEATLPAVISVNEKINEPRFPSFKGIMAAKKKEVTVLTLAEIGVE 218          
BLAST of EY659263 vs. ExPASy Swiss-Prot
Match: ETFB_MYCBO (Electron transfer flavoprotein subunit beta OS=Mycobacterium bovis GN=etfB PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.298e-18
Identity = 64/216 (29.63%), Postives = 109/216 (50.46%), Query Frame = 1
Query:   31 MVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKES----GLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAK---ILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMNAKSKPIKKYTPQELNVD 657
            +V IK+V D   + ++      ++       ++   E A+EEAL+I+E     G+   V  ++ GP +  + +R  L+MGAD+ VH++  G      +     + ++L  +E   L+I G ++ D        ++A  L  PQ T   KV ++  K     ERE D G+ TLE  LPAVI+ + ++N+PR+ +   IM AK K +   T  E+ V+
Sbjct:    5 VVLIKQVPDTWSERKLTDGDFTLDREAADAVLDEINERAVEEALQIREKEAADGIEGSVTVLTAGPERATEAIRKALSMGADKAVHLKDDGMHGSDVIQTGWALARALGTIEGTELVIAGNESTDGVGGAVPAIIAEYLGLPQLTHLRKVSIEGGKITG--ERETDEGVFTLEATLPAVISVNEKINEPRFPSFKGIMAAKKKEVTVLTLAEIGVE 218          
BLAST of EY659263 vs. ExPASy Swiss-Prot
Match: FIXA_AZOVI (Protein fixA OS=Azotobacter vinelandii GN=fixA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.225e-18
Identity = 69/219 (31.51%), Postives = 105/219 (47.95%), Query Frame = 1
Query:   22 MIEMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAK------ILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVV-LDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMNAKSKPIKKYTPQELNVD 657
            M  +V IK++ D A +IRV      +    V   +NP+   ALEEALR+K+      V  V+MGP      LR  L+ GAD  + V         T+A       +++ ++E     LI  GKQ ID D  Q G  +A  L +   T+ S++V +D  K+   VER  +GG++ LE  LP +IT     N+ R+  L ++  A    +K +      +D
Sbjct:    1 MHSVVCIKQLPDSA-QIRVHPVTNTIMRQGVPAIINPYDLFALEEALRLKDK-FGGTVTVVTMGPPMAEAALRKCLSFGADDAILVSDRAFAGSDTLATSYALSAVIRKIMEDMPVDLIFTGKQTIDGDTAQVGPGIAKRLDYQLLTYVSRIVDVDTAKKEIQVERRAEGGVQLLETSLPCLITMLEGTNEMRFGDLDDLFRAARHELKVWDRVAAGID 217          
BLAST of EY659263 vs. ExPASy Swiss-Prot
Match: ETFB_MYCLE (Electron transfer flavoprotein subunit beta OS=Mycobacterium leprae GN=etfB PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.331e-17
Identity = 62/217 (28.57%), Postives = 109/217 (50.23%), Query Frame = 1
Query:   31 MVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKES----GLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEAAGQLYPLTVAK---ILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMNAKSKPIKKYTPQELNVDV 660
            +V IK+V D   + ++      ++       ++   E A+EEAL+I+E     G+   V  ++ GP +  + +R  L+MGAD+ VH++  G      +     + ++L  +E   L+I G ++ D        ++A  L  PQ T    + ++  K     ERE D G+ TLE  LPAV++ + ++N+PR+ +   IM AK K +   T  E+ V+V
Sbjct:    5 VVLIKQVPDTWSERKLTDGDFTLDREAADAVLDEINERAVEEALQIREKEAVDGIKGSVTVLTAGPERATEAIRKALSMGADKAVHLKDDGMHGSDVIQTGWALARALGTIEGTELVIAGNESTDGVGGVVPAIIAEYLGLPQLTHLRTISVEGGKITG--ERETDEGVFTLEAVLPAVVSVNEKINEPRFPSFKGIMAAKKKEVTVLTLAEIGVEV 219          
BLAST of EY659263 vs. ExPASy Swiss-Prot
Match: FIXA_RHISN (Protein fixA OS=Rhizobium sp. (strain NGR234) GN=fixA PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.895e-16
Identity = 65/217 (29.95%), Postives = 105/217 (48.39%), Query Frame = 1
Query:   31 MVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHV---EAAGQLYPLTVAKILKSLVEVEK----PGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVV-LDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMNAKSKPIKKYTPQELNVD 657
            +V IK+V D A +IRV      +    V   +NP+   ALE+AL++++     EV  ++MGP    ++LR  L  GADR + +     AG     T   + +++ ++      P ++  GKQ ID D  Q G  +A  L   Q T+ +KV  +D   +   VER  +GG   L+ +LP +IT     N  R  +L + + A    I K+   E  ++
Sbjct:    4 VVCIKQVPDSA-QIRVHPVTNTIMRQGVPTIINPYDLFALEQALQVRDHH-GGEVTVLTMGPPMAEESLRKALTYGADRAILLTDRHFAGSDTLATSFALSQAIAKIGNSFGSPDIVFTGKQTIDGDTAQVGPGIAKRLDLVQLTYVAKVTSIDLRTRAITVERRAEGGTHVLKSELPCLITMLEGSNAIRRGSLDDALRAARSEIVKWNAVEAGIE 218          
BLAST of EY659263 vs. ExPASy Swiss-Prot
Match: FIXA_BRAJA (Protein fixA OS=Bradyrhizobium japonicum GN=fixA PE=3 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 5.895e-16
Identity = 70/221 (31.67%), Postives = 102/221 (46.15%), Query Frame = 1
Query:   22 MIEMVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHV--------EAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKV-VLDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMNAKSKPIKKYTPQELNVD 657
            M  +V IK+V D A +IRV      +    V   +NP+   ALE AL +++     E+  ++MGP    ++LR  L  GADR V +        +     Y L  A I K   E     LI  GKQ ID D  Q G  +A  L   Q T+ +KV  +D   +    ER  +GG++ L   LP +IT     NQ R   + + + A    I K++ Q+  V+
Sbjct:    1 MHNIVCIKQVPDSA-QIRVHPVTNTIMRQGVPTIINPYDLFALEAALGLRDR-FGGEITVLTMGPPSAEESLRKALTYGADRAVLLTDRCFAGSDTLATTYALATA-IRKIGKEYGPANLIFTGKQTIDGDTAQVGPGIAKRLGVGQLTYVAKVRSVDVANETIEAERRSEGGVQVLHTRLPCLITMLEATNQIRRGAMADALRAARAKIVKWSAQDAGVE 218          
BLAST of EY659263 vs. ExPASy Swiss-Prot
Match: FIXA_AZOC5 (Protein fixA OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=fixA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.512e-15
Identity = 64/218 (29.36%), Postives = 102/218 (46.79%), Query Frame = 1
Query:   31 MVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHV--------EAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVV-LDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMNAKSKPIKKYTPQELNVD 657
            +V IK+V D A +IRV      +    V   +NP+   ALE AL +++     EV  ++MGP    D+LR  L  GADR V +        +     Y L  A + K       P ++  GKQ ID D  Q G  +A  L   Q T+ +K+  +D   +   VER  +GG++ L+  LP +IT     N+ R   + + + A    +  ++ ++  V+
Sbjct:    4 VVCIKQVPDSA-QIRVHPVTNTIMRQGVPTIINPYDLFALEAALALRDQH-GGEVTVLTMGPPSAEDSLRKALTFGADRAVLLTDRFFAGSDTLATTYALATA-VRKIGETFGAPDIVFTGKQTIDGDTAQVGPGIAKRLGLLQLTYVAKIANVDLAGRSIQVERRSEGGVQVLQTRLPCLITMLEATNEIRRGAMADALRAARAEVVIWSAKDAGVE 218          
BLAST of EY659263 vs. ExPASy Swiss-Prot
Match: FIXA_RHIME (Protein fixA OS=Rhizobium meliloti GN=fixA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.477e-14
Identity = 64/216 (29.63%), Postives = 102/216 (47.22%), Query Frame = 1
Query:   31 MVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHV---EAAGQLYPLTVAKILKSLVEVEK----PGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVV-LDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMNAKSKPIKKYTPQELNV 654
            +V IK+V D A +IRV      +    V   +NP    ALEEAL++ ++    EV  V+MGP    D LR  L  GA R V +     AG     T   + +++ E+ +    P ++  GKQ ID D  Q G  +A  L   Q T+ +K++ +D   +   VER  +GG + L   LP ++T     +  R   L + + A    + K++  +  +
Sbjct:    4 VVCIKQVPDSA-QIRVHPVTNTIMRQGVPTIINPHDLAALEEALKLCDT-YGGEVTVVTMGPKMAEDALRKALTFGAHRAVLLTDRHFAGSDTLATSFALAQAIAEIGETFGTPDVVFTGKQTIDGDTAQVGPGIAKRLDLQQLTYVAKILSIDAASREITVERRAEGGSQILRTGLPCLVTMLDGADAIRRGRLDDALRAARTKVVKWSAADAGI 217          
BLAST of EY659263 vs. ExPASy Swiss-Prot
Match: FIXA_RHILP (Protein fixA OS=Rhizobium leguminosarum bv. phaseoli GN=fixA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.775e-12
Identity = 71/240 (29.58%), Postives = 110/240 (45.83%), Query Frame = 1
Query:   31 MVAIKRVVDYAVKIRVKSDRTGVETNNVKMSMNPFCEIALEEALRIKESGLASEVVAVSMGPAQCVDTLRTGLAMGADRGVHVEA---AGQLYPLTVAKILKSLVEVEK----PGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVV-LDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMNAKSKPIKKYTPQELNVD--VKSDLE-----VIQVTEPPKR 705
            ++ IK+V D A +IRV      +    V   +NP+   ALEE       G   EV  ++MGP    D LR  L + ADR V +     AG     T   + +++ ++ +    P ++   KQ ID D  Q G  +A  L   Q T+ +K+V +D   +   VER  +GG +TL   LP +IT     N+ R  +L + + A    I K+   +  ++   K  L      V +V  PP+R
Sbjct:    4 VICIKQVPDSA-QIRVDPVTNTIMRQGVPTIINPYDLFALEERSSCASHG--GEVTVLTMGPPMAEDALRKALTV-ADRAVLLTERHFAGSDTLATSFALSRAIAKIGEAFGTPDIVFTAKQTIDGDTAQVGPGIAKRLDLLQLTYVAKIVSVDINGREITVERRSEGGTQTLMSKLPCLITMLEGTNEIRRGSLDDALRAARSQIVKWNAADAGIEDLTKCGLRGSPTVVKRVFAPPER 239          
BLAST of EY659263 vs. ExPASy Swiss-Prot
Match: FIXA_SALG2 (Protein fixA OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=fixA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.457e-11
Identity = 53/192 (27.60%), Postives = 94/192 (48.96%), Query Frame = 1
Query:  145 ALEEALRIKESGLASEVVAVSMGPAQCVDTL--RTGLAMGADRGVHV--EAAGQLYPLTVAKILKSLVEVEKPGLIILGKQAIDDDCNQTGQMVAGLLSWPQGTFASKVVLDKEKQLAMVEREVDGGLETLELDLPAVITTDLRLNQPRYATLPNIMNAKSKPIKKYTPQELNVDVKSDLEVIQVTEPPKRK 708
            A+E A ++K+    ++VVA+S+G     +    +  L+ G D  + V  +   Q  P   A  L +  +     L+I G  + D    Q G +V   L+ P     SK++   +  L  VERE++  +ETL + LPAVI     +N P+  ++  I+ A  KP++ ++P ++ ++  S     QV  P +R+
Sbjct:   41 AIEAACQLKQQLGDAQVVAMSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQHTATALAAAAQKSGFDLLICGDGSSDLYAQQVGLLVGEALNIPAINGVSKILSLTDSTLT-VERELEDEVETLSIPLPAVIAVSTDINTPQIPSMKAILGAAKKPVQVWSPADIGLNSVSAYSTQQVAAPKQRE 231          
The following BLAST results are available for this feature:
BLAST of EY659263 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
ETFB_MYCTU6.298e-1829.63Electron transfer flavoprotein subunit beta OS=Myc... [more]
ETFB_MYCBO6.298e-1829.63Electron transfer flavoprotein subunit beta OS=Myc... [more]
FIXA_AZOVI8.225e-1831.51Protein fixA OS=Azotobacter vinelandii GN=fixA PE=... [more]
ETFB_MYCLE5.331e-1728.57Electron transfer flavoprotein subunit beta OS=Myc... [more]
FIXA_RHISN5.895e-1629.95Protein fixA OS=Rhizobium sp. (strain NGR234) GN=f... [more]
FIXA_BRAJA5.895e-1631.67Protein fixA OS=Bradyrhizobium japonicum GN=fixA P... [more]
FIXA_AZOC58.512e-1529.36Protein fixA OS=Azorhizobium caulinodans (strain A... [more]
FIXA_RHIME2.477e-1429.63Protein fixA OS=Rhizobium meliloti GN=fixA PE=3 SV... [more]
FIXA_RHILP1.775e-1229.58Protein fixA OS=Rhizobium leguminosarum bv. phaseo... [more]
FIXA_SALG27.457e-1127.60Protein fixA OS=Salmonella gallinarum (strain 287/... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-B10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659263 ID=EY659263; Name=EY659263; organism=Citrus sinensis; type=EST; length=899bp
TCGGCAACAACGGCAGCCGAAATGATAGAAATGGTGGCAATAAAGCGAGT
CGTTGACTACGCCGTCAAGATCAGGGTGAAATCCGACAGGACAGGAGTGG
AGACAAACAACGTTAAGATGTCGATGAACCCCTTTTGCGAGATAGCGCTG
GAGGAGGCTCTGAGGATCAAGGAATCTGGATTGGCTTCCGAGGTTGTCGC
CGTCAGCATGGGCCCCGCCCAGTGCGTTGATACTCTACGGACGGGTTTAG
CTATGGGTGCTGATAGAGGAGTCCACGTGGAGGCTGCCGGTCAGCTGTAT
CCTTTGACTGTTGCCAAGATTTTGAAGAGCCTTGTTGAGGTTGAGAAGCC
TGGCTTGATTATTCTGGGAAAGCAGGCAATTGATGATGACTGCAATCAAA
CAGGGCAAATGGTTGCAGGGCTACTCAGCTGGCCGCAGGGAACCTTTGCT
TCTAAGGTTGTGCTGGATAAGGAAAAACAATTAGCAATGGTGGAGAGAGA
AGTAGATGGTGGTCTTGAGACTTTAGAATTGGATTTACCAGCTGTAATCA
CCACTGATTTGAGACTCAACCAACCGAGGTACGCGACACTCCCCAACATA
ATGAACGCAAAATCGAAACCAATAAAGAAATATACTCCCCAGGAGCTAAA
CGTGGATGTCAAATCTGATTTGGAGGTGATTCAAGTAACAGAACCTCCCA
AGAGAAAGCTGGGGTTATATTATCTTCTGGTGAAGAGCTCATTNGACAGC
TAAAAATGAAGCCCGCGTCATTTAAACTTTCTTTGTAACTGTTATTCCCA
TCGAAATACTAGAACAAAAATTAAGAACTTCAGGCGTCAAATAAATAGCC
TTAGTTCAAATAGAGTATGGCCTCAAAATGCAGATTGGCCTGCCATGCT
back to top