EY659258

Overview
NameEY659258
Unique NameEY659258
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length848
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY659258 vs. ExPASy Swiss-Prot
Match: BRU1_SOYBN (Brassinosteroid-regulated protein BRU1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.776e-19
Identity = 51/150 (34.00%), Postives = 78/150 (52.00%), Query Frame = 1 
Query:   16 LWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPA-KPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPTGVSPSQRIKMENFRRKHMTYSYCYDQIRY-KVPPFEC 459
            LWFDP+ +FH YSI+W    IIF +D  PIR FK    +G  FP  +PM +Y+++W+  DWAT GG  + ++  AP+   + +F           + SSK  I+ S        +    R ++   ++  M Y+YC D  R+ +  P EC
Sbjct:  140 LWFDPTRNFHTYSIIWKPQHIIFLVDNTPIRVFKNAEPLGVPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNF--------KAIEFSSKSSISNSGAEYEANELDAYSRRRLRWVQKYFMIYNYCSDLKRFPQGLPAEC 281
[Close]
BLAST of EY659258 vs. ExPASy Swiss-Prot
Match: XTH11_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 11 OS=Arabidopsis thaliana GN=XTH11 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.103e-12
Identity = 44/149 (29.53%), Postives = 73/149 (48.99%), Query Frame = 1 
Query:   16 LWFDPSDDFHQYSILWTDSQIIFYIDGIPIREFKRTASMGGDFPA-KPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDITESSKVSIPTGVSPSQRIKMENFRRKHMTYSYCYDQIRYKVPPFEC 459
            LWFDP+ D+H YS LW  +Q++FY+D  PIR + +   +   +P+ + M L  ++ +GS          ++ K  PY+ +F    + GC  +       KC  T+         +S  ++    N R+ ++ Y YC D+ RY   P EC
Sbjct:  130 LWFDPTKDYHSYSFLWNPNQLVFYVDDTPIRVYSKNPDV--YYPSVQTMFLMGSVQNGS---------IIDPKQMPYIAKFQASKIEGCKTE--FMGIDKC--TDPKFWWNRKQLSSKEKTLYLNARKTYLDYDYCSDRQRYPKVPQEC 263
The following BLAST results are available for this feature:
BLAST of EY659258 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
BRU1_SOYBN1.776e-1934.00Brassinosteroid-regulated protein BRU1 OS=Glycine ... [more]
XTH11_ARATH2.103e-1229.53Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-B05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659258 ID=EY659258; Name=EY659258; organism=Citrus sinensis; type=EST; length=848bp
AGAAGAGAGAACAATCTCTGGTTTGATCCTTCTGATGATTTCCATCAGTA
CAGTATTCTCTGGACTGATTCCCAGATCATATTTTATATAGACGGTATTC
CAATTAGGGAGTTTAAGAGAACTGCATCTATGGGAGGAGATTTTCCTGCT
AAGCCGATGTCTTTGTACGCCACAATCTGGGATGGCTCTGATTGGGCTAC
AAATGGTGGCAAATACCGAGTGAACTACAAATATGCTCCCTATGTGACTG
AATTCTCTGACTTCGTACTCCACGGATGTTCATTTGATCCTATTGAGCAA
ACTTCTTCCAAGTGTGACATAACCGAAAGTTCCAAAGTATCAATCCCTAC
TGGCGTCTCCCCATCACAGAGAATTAAAATGGAAAACTTTAGGAGGAAGC
ATATGACCTATTCCTACTGCTATGACCAAATTCGATACAAAGTTCCTCCA
TTTGAGTGTGTGATCAACCCCCTTGAGGCGGAGCGCCTTAAAGTACACGA
TCCAGTTACATTCGGGGGAGGGCGGCGCCATCACGGGAAACGACACCACC
GAAGCCGATCAAGCGGAACCAAGGCCAATGACGTTTGATGATGACTATTA
TGCTACATGCANGAGCACTAATTGGTCATCTCTCCTCTTCTATATCCTTT
GAGTTTGATTTACGGAAGTGGGGTTCTGCNTATTTTGTGTATAGAGACAG
ACCAGGAGATATCAGATAGCACAGATTTTATTGAGGGTGGTANGAATGGT
TATTGGAATGGNTTGTGGNGGTNATGNATGNNGAATAGTTCATTGCCTAT
NCATTTTATCATTGTGATGATGCTGNCTTTTGGCCTTAAAAANNANNN
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