EY659256

Overview
NameEY659256
Unique NameEY659256
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length939
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSI (Putative cellulose synthase-like protein D5 OS=Oryza sativa subsp. indica GN=CSLD5 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.685e-16
Identity = 47/116 (40.52%), Postives = 68/116 (58.62%), Query Frame = 1
Query:  508 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXR-GL*XLWKFFSVGTV---------LSGMVWWSIEIS*EVCLC*HHYHSLTAIPLLMYCTLPTV 825
            ++GWIYGSVTED++TG++MH RGWRS+YC+ +R A  G+APINL+DRL+Q  R     +  FFS             L  M + ++ I           +  T++ L+MYC LP +
Sbjct:  706 RVGWIYGSVTEDVVTGYRMHNRGWRSVYCITRRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSKNNAVLASRRLKFLQRMAYLNVGI-----------YPFTSLFLIMYCLLPAL 810          
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CSLD4_ORYSJ (Cellulose synthase-like protein D4 OS=Oryza sativa subsp. japonica GN=CSLD4 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.685e-16
Identity = 49/108 (45.37%), Postives = 67/108 (62.04%), Query Frame = 1
Query:  508 QIGWIYGSVTEDILTGFKMHARGWRSIYCM-PKRPAL*GSAPINLSDRLNQCXR-GL*XLWKFFSVGTVLSGMVWWSIEIS*EVCLC*HHYHSLTAIPLLMYCTLPTV 825
            +IGWIYGSVTED++TG++MH RGWRS+YC+ P+R A  G+APINL+DRL+Q  R     +  FFS    L       +++   V       +  T++ LL YC LP V
Sbjct:  894 RIGWIYGSVTEDVVTGYRMHNRGWRSVYCVTPRRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALFASP--RMKLLQRVAYFNAGMYPFTSVFLLAYCLLPAV 999          
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CSLD3_ORYSJ (Cellulose synthase-like protein D3 OS=Oryza sativa subsp. japonica GN=CSLD3 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.685e-16
Identity = 46/110 (41.82%), Postives = 66/110 (60.00%), Query Frame = 1
Query:  508 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXRGL*XLWKFFSVGTVLSG----MVWWSIEIS*EVCLC*HHYHSLTAIPLLMYCTLPTV 825
            ++GWIYGSVTED++TG++MH RGWRS+YC+ KR A  G+APINL+DRL+Q  R     W   SV    S     +    + +   +       +  T+I LL+YC +P +
Sbjct:  836 RVGWIYGSVTEDVVTGYRMHNRGWRSVYCITKRDAFLGTAPINLTDRLHQVLR-----WATGSVEIFFSRNNAFLASRKLMLLQRISYLNVGIYPFTSIFLLVYCFIPAL 940          
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSJ (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. japonica GN=CSLD2 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.813e-16
Identity = 45/107 (42.06%), Postives = 67/107 (62.62%), Query Frame = 1
Query:  508 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXR-GL*XLWKFFSVGTVLSGMVWWSIEIS*EVCLC*HHYHSLTAIPLLMYCTLPTV 825
            ++GWIYGSVTED++TG++MH RGW+S+YC+ KR A  G+APINL+DRL+Q  R     +  FFS    L  +    ++    +       +  T+I L++YC LP +
Sbjct:  862 RVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNAL--LASRKMKFLQRIAYLNVGIYPFTSIFLIVYCFLPAL 966          
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSI (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. indica GN=CSLD2 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.813e-16
Identity = 45/107 (42.06%), Postives = 67/107 (62.62%), Query Frame = 1
Query:  508 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXR-GL*XLWKFFSVGTVLSGMVWWSIEIS*EVCLC*HHYHSLTAIPLLMYCTLPTV 825
            ++GWIYGSVTED++TG++MH RGW+S+YC+ KR A  G+APINL+DRL+Q  R     +  FFS    L  +    ++    +       +  T+I L++YC LP +
Sbjct:  862 RVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNAL--LASRKMKFLQRIAYLNVGIYPFTSIFLIVYCFLPAL 966          
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSJ (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica GN=CSLD1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.829e-15
Identity = 43/107 (40.19%), Postives = 66/107 (61.68%), Query Frame = 1
Query:  508 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXR-GL*XLWKFFSVGTVLSGMVWWSIEIS*EVCLC*HHYHSLTAIPLLMYCTLPTV 825
            ++GWIYGSVTED++TG++MH RGW+S+YC+  R A  G+APINL+DRL+Q  R     +  FFS    L       +++   +       +  T++ L++YC LP +
Sbjct:  817 RVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTHRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALFASS--KMKVLQRIAYLNVGIYPFTSVFLIVYCFLPAL 921          
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSI (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica GN=CSLD1 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.829e-15
Identity = 43/107 (40.19%), Postives = 66/107 (61.68%), Query Frame = 1
Query:  508 QIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXR-GL*XLWKFFSVGTVLSGMVWWSIEIS*EVCLC*HHYHSLTAIPLLMYCTLPTV 825
            ++GWIYGSVTED++TG++MH RGW+S+YC+  R A  G+APINL+DRL+Q  R     +  FFS    L       +++   +       +  T++ L++YC LP +
Sbjct:  817 RVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTHRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALFASS--KMKVLQRIAYLNVGIYPFTSVFLIVYCFLPAL 921          
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CSLD6_ARATH (Putative cellulose synthase-like protein D6 OS=Arabidopsis thaliana GN=CSLD6 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 9.078e-15
Identity = 45/107 (42.06%), Postives = 61/107 (57.01%), Query Frame = 1
Query:  511 IGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXRGL*XLWKFFSVGTVLSG----MVWWSIEIS*EVCLC*HHYHSLTAIPLLMYCTLP 819
            +GWIYGSVTED++TGF+MH +GWRS YC+ +  A  GSAPINL+DRL+Q  R     W   SV    S          +++   +       +  T+I +L YC LP
Sbjct:  673 VGWIYGSVTEDVVTGFRMHEKGWRSFYCVTEPDAFRGSAPINLTDRLHQVLR-----WATGSVEIFFSRNNAIFAGPKLKLLQRIAYLNVGIYPFTSIFILTYCFLP 774          
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CSLF9_ORYSJ (Probable mixed-linked glucan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLF9 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.763e-14
Identity = 27/52 (51.92%), Postives = 39/52 (75.00%), Query Frame = 1
Query:  511 IGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXR 666
            +GW+Y   TED++TGF++H +GWRS+YC  +  A  G+APINL++RL Q  R
Sbjct:  555 VGWVYDIATEDVVTGFRLHRKGWRSMYCAMEPDAFRGTAPINLTERLYQILR 606          

HSP 2 Score: 30.4166 bits (67), Expect = 6.763e-14
Identity = 11/22 (50.00%), Postives = 17/22 (77.27%), Query Frame = 3
Query:  657 VLXWALGSVEILFSRHCPIWYG 722
            +L W+ GS+E+ FSR+CP+  G
Sbjct:  604 ILRWSGGSLEMFFSRNCPLLAG 625          
BLAST of EY659256 vs. ExPASy Swiss-Prot
Match: CSLF7_ORYSJ (Probable mixed-linked glucan synthase 7 OS=Oryza sativa subsp. japonica GN=CSLF7 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.928e-13
Identity = 31/52 (59.62%), Postives = 38/52 (73.08%), Query Frame = 1
Query:  511 IGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAL*GSAPINLSDRLNQCXR 666
            +GW+YG+VTED+ TGF MH RGWRS Y      A  G+APINL+DRL+Q  R
Sbjct:  519 VGWVYGTVTEDVATGFCMHRRGWRSAYYAAAPDAFRGTAPINLADRLHQVLR 570          

HSP 2 Score: 26.5646 bits (57), Expect = 1.928e-13
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 3
Query:  657 VLXWALGSVEILFSRH 704
            VL WA GS+EI FSR+
Sbjct:  568 VLRWAAGSLEIFFSRN 583          
The following BLAST results are available for this feature:
BLAST of EY659256 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
CSLD5_ORYSI3.685e-1640.52Putative cellulose synthase-like protein D5 OS=Ory... [more]
CSLD4_ORYSJ3.685e-1645.37Cellulose synthase-like protein D4 OS=Oryza sativa... [more]
CSLD3_ORYSJ3.685e-1641.82Cellulose synthase-like protein D3 OS=Oryza sativa... [more]
CSLD2_ORYSJ4.813e-1642.06Cellulose synthase-like protein D2 OS=Oryza sativa... [more]
CSLD2_ORYSI4.813e-1642.06Cellulose synthase-like protein D2 OS=Oryza sativa... [more]
CSLD1_ORYSJ1.829e-1540.19Cellulose synthase-like protein D1 OS=Oryza sativa... [more]
CSLD1_ORYSI1.829e-1540.19Cellulose synthase-like protein D1 OS=Oryza sativa... [more]
CSLD6_ARATH9.078e-1542.06Putative cellulose synthase-like protein D6 OS=Ara... [more]
CSLF9_ORYSJ6.763e-1451.92Probable mixed-linked glucan synthase 9 OS=Oryza s... [more]
CSLF7_ORYSJ1.928e-1359.62Probable mixed-linked glucan synthase 7 OS=Oryza s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-B03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659256 ID=EY659256; Name=EY659256; organism=Citrus sinensis; type=EST; length=939bp
CCACGCGTCCGCATATTTGCCTACGCAGGTGCTGGATTTGATGATGAAAA
GTCACTACTTATGTCACAAATGAGCCTGGAGAAGCGATTTGGTCAATCAG
CTGTTTTTGTTGCTTCTACACTTATGGAGAATGGTGGTGTTCCACAGTCT
GCAACACATGAAACTCTTCTTAAGGAGGCCATTCATGTTATCAGTTGTGG
TTACGAGGATAAAACAGAATGGGGATCTGAGGTATGTTGTCTGATTTAAC
AGACACTGATGTATTTCCAAGTTTCTGTCTATATAAAGTGACTGTGTGAA
TCTAAGCAACTGAAATGACTCATTGTTCATCGAACCATTTCTACTATGCT
ACTGAATGACCCCTTGCGATGTTATTATAATTCCAGTTCATCTGTAAATA
ATATGGCACACCCACCAACACACATTTCTTATTGAAGAAATAACTTGCAT
TCTCTTTGTTATCATTTCAGTTTCTCTTGCAAACACCGATTTTTGTCTCT
TGCTCTGCAGATAGGATGGATTTATGGTTCTGTTACGGAAGATATTCTTA
CAGGATTCAAGATGCATGCCCGTGGTTGGCGGTCAATTTACTGCATGCCT
AAGCGCCCAGCCCTTTAAGGGTCTGCTCCTATTAATCTTTCAGATCGTCT
AAACCAGTGCTNNCGTGGGCTCTAGGNTCTGTGGAAATTCTTTTCAGTCG
GCACTGTCCTATCTGGTATGGTATGGTGGTCGATTGAAATTTCTTGAGAA
GTTTGCCTATGTTGACACCACTATCATTCTCTCACTGCAATTCCTCTTCT
CATGTATTGCACGCTGCCAACTGTCTGTCTATTAACGAACAGTTCATTAT
GCTCAAGTATTTNATCATTACCATTACTCACTTTTTACCTTTTTATTTTT
CAGGTTGTGAAAATGACTCCTACCCTAAATTCTTTTGTT
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