EY659249

Overview
NameEY659249
Unique NameEY659249
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659249 vs. ExPASy Swiss-Prot
Match: YN8H_YEAST (Uncharacterized protein YNR029C OS=Saccharomyces cerevisiae GN=YNR029C PE=1 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 3.062e-14
Identity = 36/116 (31.03%), Postives = 62/116 (53.45%), Query Frame = 3
Query:  207 FYAEDAIFNEVKLDGVVTLVDAKH-----------AGFHLDEVKPKGVVNEAVEQIAYADRIIVNKTDLV--GGPQVASLVERIKNINRMARMKRTEFGKVDLDYVLVIGGFDLER 515
            F+ ++ + + V +DG++T++D +H           A +H D+V  +G +  A  Q+A ADRII+NK D +      V  L ER++ IN +A M  T++    +  +L I  +D  R
Sbjct:  180 FWQDEGLNSSVYIDGIITVLDCEHILKCLDDISIDAHWHGDKVGLEGNLTIAHFQLAMADRIIMNKYDTIEHSPEMVKQLKERVREINSIAPMFFTKYSDTPIQNLLDIHAYDSVR 295          

HSP 2 Score: 43.8986 bits (102), Expect = 3.062e-14
Identity = 23/71 (32.39%), Postives = 42/71 (59.15%), Query Frame = 2
Query:    2 ISVIENEYGEVDIDG*LVAAK--STGAEDIIMLNNGCLSCTVRGDLVRMISELVSKKKGKFDHIVIETTDV 208
            I+VI NE+G+       +  K  S   ++ + L NGCL C+++   V+ I ++V +  GK D+I++ET+ +
Sbjct:  100 IAVILNEFGDSSEIEKAMTIKNGSNSYQEWLDLGNGCLCCSLKNIGVKAIEDMVERSPGKIDYILLETSGI 170          
BLAST of EY659249 vs. ExPASy Swiss-Prot
Match: Y4527_DICDI (COBW domain-containing protein DDB_G0274527 OS=Dictyostelium discoideum GN=DDB_G0274527 PE=3 SV=1)

HSP 1 Score: 47.3654 bits (111), Expect = 7.394e-12
Identity = 25/79 (31.65%), Postives = 47/79 (59.49%), Query Frame = 2
Query:    2 ISVIENEYGEVDIDG*LVA----------AKSTGAEDIIMLNNGCLSCTVRGDLVRMISELVSKKKGKFDHIVIETTDV 208
            I+VI N+  EV+ID  L+           A     E ++ ++NGC+ CT+R DL+  +++L  +K  +FD+++IE++ +
Sbjct:   72 IAVIVNDMSEVNIDSKLILENEFKITRTKATEKQVEAVVEMSNGCICCTMREDLLVEVTKLAKEK--RFDYLIIESSGI 148          

HSP 2 Score: 44.2838 bits (103), Expect = 7.394e-12
Identity = 34/120 (28.33%), Postives = 59/120 (49.17%), Query Frame = 3
Query:  204 TFYAEDAIFN---EVKLDGVVTLVDA-------------KHAGFHLDEVKPKGVVNEAVEQIAYADRIIVNKTDLVGGPQVASLVERIKNINRMARMKRTEFGKVDLDYVLVIGGFDLER 515
            TF  + +I N     KLD +VT+VD              K       +   + +V+  ++Q+ +++ I++NK DLV   +V ++   IK+IN  AR+ R+    V L  +L  G FD ++
Sbjct:  159 TFEIDGSIENLKDYTKLDTMVTVVDCSTWLEQYQSGESLKDKDMQATDQDERSLVDLLLDQVEFSNVILLNKCDLVSEERVKTIEGLIKHINPEARLLRSTNSVVPLKEILNTGLFDFKK 278          
BLAST of EY659249 vs. ExPASy Swiss-Prot
Match: P47K_PSECL (47 kDa protein OS=Pseudomonas chlororaphis PE=3 SV=1)

HSP 1 Score: 51.9878 bits (123), Expect = 3.553e-11
Identity = 25/72 (34.72%), Postives = 48/72 (66.67%), Query Frame = 2
Query:    2 ISVIENEYGEVDIDG*LV---AAKSTGAEDIIMLNNGCLSCTVRGDLVRMISELVSKKKGKFDHIVIETTDV 208
            ++VI N+  EV++D   V    +   G +++I ++NGC+ CT+R DL+  IS+L   ++ +FD+++IE+T +
Sbjct:   39 VAVIVNDMSEVNLDAESVQRDVSLHRGRDELIEMSNGCICCTLRADLLEQISDLA--RQQRFDYLLIESTGI 108          

HSP 2 Score: 37.3502 bits (85), Expect = 3.553e-11
Identity = 28/102 (27.45%), Postives = 46/102 (45.10%), Query Frame = 3
Query:  240 KLDGVVTLVDAKHAGFHLDEV------------KPKGVVNEAVEQIAYADRIIVNKTDLVGGPQVASLVERIKNINRMARMKRTEFGKVDLDYVLVIGGFDL 509
            +LD +VT+VD       L+                + + +  +EQ+ YA+ I+VNK DL+  P   ++   +  +N  AR+     G V L  +L    FDL
Sbjct:  133 RLDTLVTVVDGSQFQALLESTDTVARADTEAHTSTRHLADLLIEQVEYANVILVNKRDLIDEPGYQAVHAILAGLNPSARIMPMAHGNVALSSLLDTHLFDL 234          
The following BLAST results are available for this feature:
BLAST of EY659249 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
YN8H_YEAST3.062e-1431.03Uncharacterized protein YNR029C OS=Saccharomyces c... [more]
Y4527_DICDI7.394e-1231.65COBW domain-containing protein DDB_G0274527 OS=Dic... [more]
P47K_PSECL3.553e-1134.7247 kDa protein OS=Pseudomonas chlororaphis PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-A08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659249 ID=EY659249; Name=EY659249; organism=Citrus sinensis; type=EST; length=874bp
CATATCCGTGATTGAGAACGAGTATGGTGAAGTGGACATTGATGGGTAGT
TAGTTGCTGCTAAAAGTACTGGGGCTGAGGACATAATTATGCTTAACAAT
GGTTGTTTGAGCTGCACAGTAAGAGGTGATCTTGTGAGGATGATTTCAGA
ATTAGTCAGTAAAAAGAAAGGGAAATTCGACCATATTGTGATTGAAACTA
CAGACGTTTTATGCTGAGGATGCGATTTTTAATGAAGTGAAGTTGGATGG
TGTTGTCACTTTGGTTGATGCTAAGCATGCTGGTTTTCATTTGGATGAGG
TTAAGCCAAAAGGAGTTGTCAATGAGGCAGTAGAGCAAATTGCATATGCA
GACCGTATTATAGTAAATAAGACTGATCTTGTTGGTGGGCCGCAAGTTGC
TTCATTGGTCGAGAGAATAAAGAACATAAATAGGATGGCTCGTATGAAGC
GAACGGAGTTTGGAAAAGTTGACTTGGATTATGTTCTTGTAATTGGAGGC
TTTGATCTGGAGAGAACATCATCATGATCACCATTCACATGATCACACAC
ATGATCCTGGTGTCTCATCTGTCGGCATAGTTTGTGAAGGGAATTTAGAT
CTTGATAAGGCTAACATGTGGCTGGGAACATTGTTGATGGAACGTAGCGA
AGACATATATNCGATGAAAGGCCTTCTGTCTGTTCGGGGTATGGATGAGC
GATTTGTCTTTCAGGGTGTTCATGACATATTCCAAGGCTTGCCTGATCNG
ATGTGGGGCCCANACGAACCAGAGTAANCAAGATTGTGTTCATTCGAAAA
ACTTGATGGACAGGATTANAGAAGGGATTTAAGCCTGTTTGCTGGGATCT
CTAAAAGATTNCATTTGCTCGACT
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