EY659243
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_EHRCR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Ehrlichia chaffeensis (strain Arkansas) GN=sucC PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.359e-30 Identity = 67/199 (33.67%), Postives = 100/199 (50.25%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKL-------YKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 K +VV QI AGGRG GGV + + +E + MLG L+T QT G+ V KVYL E ++ E Y + +++RK II ++GG IE++A P ++ I+ G + D N +++Q +K+ YK +D +EINPL +TS + +A DAK+NFDDNA +R Sbjct: 41 KVVVVKAQIHAGGRGKA-------GGVVVSRTLDETKTSIKNMLGSTLITHQTSKDGQKVRKVYLEEGCNIKKEYYISAIVNRKQGQVSIIFSTEGGVDIEEVAATSPEKVIVCNINPVFGFQGFHGRNLC-------FDSNLSLDQTRKISDIAGKIYKAVLSTDANQIEINPLVETSSGEFIALDAKINFDDNALYR 225 HSP 2 Score: 54.6842 bits (130), Expect = 3.359e-30 Identity = 24/36 (66.67%), Postives = 29/36 (80.56%), Query Frame = 1 Query: 640 VAADKADINYIGLDGEIGCMVNGAGLALATMDIFKY 747 + A K ++YI +DG IGCMVNGAGLA+ATMDI KY Sbjct: 243 IEASKHGLSYIKMDGNIGCMVNGAGLAMATMDIIKY 278
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_MICLC (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Micrococcus luteus (strain ATCC 4698 / IFO 3333 / NCTC 2665) GN=sucC PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 4.373e-30 Identity = 65/190 (34.21%), Postives = 100/190 (52.63%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQ 593 VV Q+ GGRG GGV + K +E + + +LG + +G V +V + + + E YF+++LDR + + +GG IE LAE+ P + KVP+ GI E A K+V R D E ++KL+++F + D TL+E+NPL KT +++A D K++ DDNA FRQ Sbjct: 43 VVKAQVKVGGRGKA-------GGVKVAKTADEAYEHAKAILGMDI-------KGHTVHQVMIAQGADIAEEYYFSVLLDRANRTYLAMCSVEGGMEIEQLAEERPEALAKVPVSALTGIDAETAQKIVAEAGFPEELRADVAEVIQKLWEVFEKEDATLVEVNPLVKTGDGKILALDGKVSLDDNAEFRQ 218 HSP 2 Score: 45.4394 bits (106), Expect = 4.373e-30 Identity = 18/41 (43.90%), Postives = 28/41 (68.29%), Query Frame = 1 Query: 625 DDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKY 747 +DP A D+NY+ LDG++G + NGAGL ++T+D+ Y Sbjct: 230 EDPLEAKAKANDLNYVKLDGQVGVIGNGAGLVMSTLDVVAY 270
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_HAMD5 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) GN=sucC PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.373e-30 Identity = 64/190 (33.68%), Postives = 95/190 (50.00%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQ 593 V Q+ AGGRG GGV + ++V + + LG+ LVT QT QG+ V + + + E+Y ++DR ++ + + ++GG IE +AEK P++I KV ID G ++ L + + L KLF E D LLEINPL T ++L+ DAKL D NA +RQ Sbjct: 44 VAKCQVHAGGRGKS-------GGVKLCNNPQDVSAFAEQWLGKNLVTYQTDLQGQPVHHILVEAATDIAQELYLGAVIDRSSSRVVFMASTEGGVEIEKVAEKTPHLIHKVTIDPLTGPQPFQGRELAFQLGLTGKKVSQFSQIFMNLAKLFLECDLALLEINPLVITKKEELICLDAKLTVDGNALYRQ 226 HSP 2 Score: 55.4546 bits (132), Expect = 4.373e-30 Identity = 24/42 (57.14%), Postives = 32/42 (76.19%), Query Frame = 1 Query: 619 TQDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFK 744 TQ+D R A + ++NY+ L+G IGCMVNGAGLA+ TMD+ K Sbjct: 236 TQEDAREAHAAQFELNYVALEGNIGCMVNGAGLAMGTMDMVK 277
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_ERWT9 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=sucC PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.373e-30 Identity = 66/194 (34.02%), Postives = 97/194 (50.00%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQ 593 VV Q+ AGGRG GGV +V KE++ + LG+ LVT QT G+ V+++ + + E+Y ++DR T + + ++GG IE +AE+ P++I K+ +D G + LA K+ + Q K++ LF E D L+EINPL T LV D KL D NA FRQ Sbjct: 44 VVKCQVHAGGRGKA-------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDASGQPVNQILVEAATDIDKELYLGAVVDRGTRRVVFMASTEGGVEIEKVAEETPHLIHKMALDPLTGPQPYQGRE----LAFKLGLTGKQVGQFTKIFMGLATLFLERDLALVEINPLVVTKQGDLVCLDGKLTADGNALFRQ 226 HSP 2 Score: 57.7658 bits (138), Expect = 4.373e-30 Identity = 26/47 (55.32%), Postives = 34/47 (72.34%), Query Frame = 1 Query: 616 PTQDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756 P+Q+D R A + ++NY+ L+G IGCMVNGAGLA+ TMDI K G Sbjct: 235 PSQEDSREAHAAQWELNYVALEGNIGCMVNGAGLAMGTMDIVKLSGG 281
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_PSEU5 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas stutzeri (strain A1501) GN=sucC PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 4.373e-30 Identity = 62/190 (32.63%), Postives = 92/190 (48.42%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQ 593 VV Q+ AGGRG GGV +V+ K+E + + L + LVT QT G+ VSK+ + + E+Y ++DR + + + ++GG IE +A P I+K ID G A ++ L K + L +LF + D LLE+NPL + L DAK+N D NA +RQ Sbjct: 44 VVKAQVHAGGRGKA-------GGVKLVRSKDEARAFAQQWLDKRLVTYQTDANGQPVSKILVEACTDIDKELYLGAVVDRASRRIVFMASTEGGVDIEKVAHDTPEKILKATIDPLVGAQPFQARELAFQLGLKGDQVKQFVHIFVGLAQLFQDYDLALLEVNPLVIKTDGNLHCLDAKINIDSNAIYRQ 226 HSP 2 Score: 63.5438 bits (153), Expect = 4.373e-30 Identity = 28/41 (68.29%), Postives = 33/41 (80.49%), Query Frame = 1 Query: 616 PTQDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDI 738 P+QDDPR A K ++NY+ LDG IGCMVNGAGLA+ TMDI Sbjct: 235 PSQDDPREAHAAKWELNYVALDGNIGCMVNGAGLAMGTMDI 275
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_BACTN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacteroides thetaiotaomicron GN=sucC PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.697e-30 Identity = 62/190 (32.63%), Postives = 101/190 (53.16%), Query Frame = 3 Query: 24 LVVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 +V+ Q+L GGRG GGV +V E+ + +LG + +G V+++ + E + + E Y + +DR T I++ + GG IE++A + P I++ ID F G+ D A + L P + ++ LYK+F E+D +L+E+NPLA T+ L+A DAK+ FDDNA +R Sbjct: 43 VVIKAQVLTGGRGKA-------GGVKLVDNTEDTYQEAKNILGMSI-------KGLPVNQILVSEAVDIAAEYYVSFTIDRNTRSVILMMSASGGMDIEEVARQSPEKIIRYAIDPFIGLPDYLARRFAFSLFPHIEQAGRMAAILQALYKIFMENDASLVEVNPLALTAKGILMAIDAKIVFDDNALYR 218 HSP 2 Score: 50.8322 bits (120), Expect = 5.697e-30 Identity = 22/43 (51.16%), Postives = 30/43 (69.77%), Query Frame = 1 Query: 616 PTQDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFK 744 PT+++ A +Y+ +DG IGCMVNGAGLA+ATMD+ K Sbjct: 228 PTEEEKVEADAKNKGFSYVHMDGNIGCMVNGAGLAMATMDMIK 270
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_SHEB9 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella baltica (strain OS195) GN=sucC PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.257e-29 Identity = 62/190 (32.63%), Postives = 90/190 (47.37%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQ 593 VV Q+ AGGRG GGV + KEE+ + LG+ LVT QT +G+ V+K+ + + NE+Y ++DR T + + ++GG IE +AE+ P +I ID G A + L + L +F + D LLEINPL T+ L D K+ D NA +RQ Sbjct: 44 VVKCQVHAGGRGKA-------GGVKVTGDKEEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYLGAVVDRATRRVVFMASTEGGVEIEKVAEETPELIHTAIIDPLTGPQGYQARDLGFKLGLNPTQMKQFTKIFMGLATMFVDHDFALLEINPLVITTEGNLHCLDGKIGIDGNALYRQ 226 HSP 2 Score: 60.4622 bits (145), Expect = 1.257e-29 Identity = 26/41 (63.41%), Postives = 32/41 (78.05%), Query Frame = 1 Query: 616 PTQDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDI 738 P+QDD R A K ++NY+ LDG +GCMVNGAGLA+ TMDI Sbjct: 235 PSQDDAREAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDI 275
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_SHEB8 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella baltica (strain OS185) GN=sucC PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.257e-29 Identity = 62/190 (32.63%), Postives = 90/190 (47.37%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQ 593 VV Q+ AGGRG GGV + KEE+ + LG+ LVT QT +G+ V+K+ + + NE+Y ++DR T + + ++GG IE +AE+ P +I ID G A + L + L +F + D LLEINPL T+ L D K+ D NA +RQ Sbjct: 44 VVKCQVHAGGRGKA-------GGVKVTGDKEEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYLGAVVDRATRRVVFMASTEGGVEIEKVAEETPELIHTAIIDPLTGPQGYQARDLGFKLGLNPTQMKQFTKIFMGLATMFVDHDFALLEINPLVITTEGNLHCLDGKIGIDGNALYRQ 226 HSP 2 Score: 60.4622 bits (145), Expect = 1.257e-29 Identity = 26/41 (63.41%), Postives = 32/41 (78.05%), Query Frame = 1 Query: 616 PTQDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDI 738 P+QDD R A K ++NY+ LDG +GCMVNGAGLA+ TMDI Sbjct: 235 PSQDDAREAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDI 275
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_SHEB5 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=sucC PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.257e-29 Identity = 62/190 (32.63%), Postives = 90/190 (47.37%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQ 593 VV Q+ AGGRG GGV + KEE+ + LG+ LVT QT +G+ V+K+ + + NE+Y ++DR T + + ++GG IE +AE+ P +I ID G A + L + L +F + D LLEINPL T+ L D K+ D NA +RQ Sbjct: 44 VVKCQVHAGGRGKA-------GGVKVTGDKEEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYLGAVVDRATRRVVFMASTEGGVEIEKVAEETPELIHTAIIDPLTGPQGYQARDLGFKLGLNPTQMKQFTKIFMGLATMFVDHDFALLEINPLVITTEGNLHCLDGKIGIDGNALYRQ 226 HSP 2 Score: 60.4622 bits (145), Expect = 1.257e-29 Identity = 26/41 (63.41%), Postives = 32/41 (78.05%), Query Frame = 1 Query: 616 PTQDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDI 738 P+QDD R A K ++NY+ LDG +GCMVNGAGLA+ TMDI Sbjct: 235 PSQDDAREAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDI 275
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_SHEB2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella baltica (strain OS223) GN=sucC PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.257e-29 Identity = 62/190 (32.63%), Postives = 90/190 (47.37%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQ 593 VV Q+ AGGRG GGV + KEE+ + LG+ LVT QT +G+ V+K+ + + NE+Y ++DR T + + ++GG IE +AE+ P +I ID G A + L + L +F + D LLEINPL T+ L D K+ D NA +RQ Sbjct: 44 VVKCQVHAGGRGKA-------GGVKVTGDKEEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYLGAVVDRATRRVVFMASTEGGVEIEKVAEETPELIHTAIIDPLTGPQGYQARDLGFKLGLNPTQMKQFTKIFMGLATMFVDHDFALLEINPLVITTEGNLHCLDGKIGIDGNALYRQ 226 HSP 2 Score: 60.4622 bits (145), Expect = 1.257e-29 Identity = 26/41 (63.41%), Postives = 32/41 (78.05%), Query Frame = 1 Query: 616 PTQDDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDI 738 P+QDD R A K ++NY+ LDG +GCMVNGAGLA+ TMDI Sbjct: 235 PSQDDAREAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDI 275 The following BLAST results are available for this feature:
BLAST of EY659243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659243 ID=EY659243; Name=EY659243; organism=Citrus sinensis; type=EST; length=836bpback to top |