EY659243
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_MYCBT (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=sucC PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.057e-24 Identity = 58/194 (29.90%), Postives = 99/194 (51.03%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDG--LAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQ 593 + ++V Q+ GGRG K+G G + ++ + + +LG + +G IV K+ + E + E Y + +LDR + + +GG IE++A P + KVP++ G+ + A + + L +V D A + KL++LF D TL+E+NPL +T +++A DAK+ D NA FRQ Sbjct: 40 RPVMVKAQVKIGGRG----KAG--GVKYAATPQDAYEHAKNILGLDI-------KGHIVKKLLVAEASDIAEEYYLSFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVNAVKGVDLDFARSIAEQGHLPAEVLDT--AAVTIAKLWELFVAEDATLVEVNPLVRTPDHKILALDAKITLDGNADFRQ 218 HSP 2 Score: 47.3654 bits (111), Expect = 1.057e-24 Identity = 19/40 (47.50%), Postives = 30/40 (75.00%), Query Frame = 1 Query: 628 DPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKY 747 DP + A + D+NY+ LDG++G + NGAGLA++T+D+ Y Sbjct: 231 DPLELKAKEHDLNYVKLDGQVGIIGNGAGLAMSTLDVVAY 270
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_MYCBP (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=sucC PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.057e-24 Identity = 58/194 (29.90%), Postives = 99/194 (51.03%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDG--LAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQ 593 + ++V Q+ GGRG K+G G + ++ + + +LG + +G IV K+ + E + E Y + +LDR + + +GG IE++A P + KVP++ G+ + A + + L +V D A + KL++LF D TL+E+NPL +T +++A DAK+ D NA FRQ Sbjct: 40 RPVMVKAQVKIGGRG----KAG--GVKYAATPQDAYEHAKNILGLDI-------KGHIVKKLLVAEASDIAEEYYLSFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVNAVKGVDLDFARSIAEQGHLPAEVLDT--AAVTIAKLWELFVAEDATLVEVNPLVRTPDHKILALDAKITLDGNADFRQ 218 HSP 2 Score: 47.3654 bits (111), Expect = 1.057e-24 Identity = 19/40 (47.50%), Postives = 30/40 (75.00%), Query Frame = 1 Query: 628 DPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKY 747 DP + A + D+NY+ LDG++G + NGAGLA++T+D+ Y Sbjct: 231 DPLELKAKEHDLNYVKLDGQVGIIGNGAGLAMSTLDVVAY 270
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_MYCBO (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Mycobacterium bovis GN=sucC PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.057e-24 Identity = 58/194 (29.90%), Postives = 99/194 (51.03%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDG--LAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQ 593 + ++V Q+ GGRG K+G G + ++ + + +LG + +G IV K+ + E + E Y + +LDR + + +GG IE++A P + KVP++ G+ + A + + L +V D A + KL++LF D TL+E+NPL +T +++A DAK+ D NA FRQ Sbjct: 40 RPVMVKAQVKIGGRG----KAG--GVKYAATPQDAYEHAKNILGLDI-------KGHIVKKLLVAEASDIAEEYYLSFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVNAVKGVDLDFARSIAEQGHLPAEVLDT--AAVTIAKLWELFVAEDATLVEVNPLVRTPDHKILALDAKITLDGNADFRQ 218 HSP 2 Score: 47.3654 bits (111), Expect = 1.057e-24 Identity = 19/40 (47.50%), Postives = 30/40 (75.00%), Query Frame = 1 Query: 628 DPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKY 747 DP + A + D+NY+ LDG++G + NGAGLA++T+D+ Y Sbjct: 231 DPLELKAKEHDLNYVKLDGQVGIIGNGAGLAMSTLDVVAY 270
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_MYCA1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Mycobacterium avium (strain 104) GN=sucC PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.375e-24 Identity = 59/194 (30.41%), Postives = 96/194 (49.48%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDG--LAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQ 593 + ++V Q+ GGRG K+G G + E+ + +LG + +G +V K+ + E + E Y + +LDR + + +GG IE++A P + KVP+D G+ A + + L +V D A + KL++LF D TL+E+NPL +T Q++A D K+ D NA FRQ Sbjct: 40 RPVMVKAQVKTGGRG----KAG--GVKYAATPEDAYTHAKNILGLDI-------KGHVVKKLLVSEASDIAEEYYISFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVDAVTGVDLATARSIAEKGHLPAEVLDA--AAVTINKLWELFVAEDATLVEVNPLVRTPDNQILALDGKVTLDANADFRQ 218 HSP 2 Score: 45.8246 bits (107), Expect = 1.375e-24 Identity = 18/40 (45.00%), Postives = 29/40 (72.50%), Query Frame = 1 Query: 628 DPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKY 747 DP + A + D+NY+ LDG++G + NGAGL ++T+D+ Y Sbjct: 231 DPLELKAKEHDLNYVKLDGQVGIIGNGAGLVMSTLDVVAY 270
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_CORGL (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Corynebacterium glutamicum GN=sucC PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.789e-24 Identity = 59/191 (30.89%), Postives = 99/191 (51.83%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 VV Q+ GGRG GGV + + D + +LG + +G V++V + + + E YF+I+LDR + + +GG IE LA++ P + KV +D GI ++ A ++V G +VA++ I + K+++++ E + TL+E+NPL T ++A D K+ DDNA FR Sbjct: 43 VVKAQVKVGGRGKA-------GGVRVAPTSAQAFDAADAILGMDI-------KGHTVNQVMVAQGADIAEEYYFSILLDRANRSYLAMCSVEGGMEIEILAKEKPEALAKVEVDPLTGIDEDKAREIVTAAGFETEVAEK--VIPVLIKIWQVYYEEEATLVEVNPLVLTDDGDVIALDGKITLDDNADFR 217 HSP 2 Score: 41.5874 bits (96), Expect = 1.789e-24 Identity = 17/31 (54.84%), Postives = 24/31 (77.42%), Query Frame = 1 Query: 646 ADKADINYIGLDGEIGCMVNGAGLALATMDI 738 A K D+NY+ LDG +G + NGAGL ++T+DI Sbjct: 238 AKKNDLNYVKLDGSVGIIGNGAGLVMSTLDI 268
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_LEIXX (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Leifsonia xyli subsp. xyli GN=sucC PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.790e-24 Identity = 58/195 (29.74%), Postives = 94/195 (48.21%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVV------DGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 VV Q+ GGRG GGV + K +E E+ + +LG + +G +V +V + + E YF+++LDR + + +GG IE LA + P + ++ +D G+ A ++ + L KVAD KLY ++ D TL+E+NPL T +++A D K+ D+NA FR Sbjct: 43 VVKAQVKTGGRGK-------VGGVKVAKNPDEAEEAAKAILGLDI-------KGHVVRRVMVSGGARIAREFYFSVLLDRANRSYLSLTSVEGGMEIEQLAVEKPEALARIGVDPIAGVDTTKATEIARAAGFPEELVSKVAD------VFVKLYDVYKGEDATLVEVNPLVLTEEGEVIALDGKVTLDENAGFR 217 HSP 2 Score: 47.7506 bits (112), Expect = 1.790e-24 Identity = 19/40 (47.50%), Postives = 29/40 (72.50%), Query Frame = 1 Query: 628 DPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKY 747 DP A +AD+NY+ LDG++G + NGAGL ++T+D+ Y Sbjct: 231 DPLEAKAKEADLNYVKLDGQVGIIGNGAGLVMSTLDVVAY 270
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_MYCGI (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Mycobacterium gilvum (strain PYR-GCK) GN=sucC PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.329e-24 Identity = 57/194 (29.38%), Postives = 100/194 (51.55%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDG--LAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQ 593 K ++V Q+ GGRG K+G G + ++ + +LG + +G +V K+ + E + E Y + +LDR + + +GG IE++A P+ + KVP++ G+ A ++ + L +V D A ++KL+++F + D TL+E+NPL +T Q++A D K+ D NA FRQ Sbjct: 40 KPVMVKAQVKVGGRG----KAG--GVKYAATPDDAFTHAQNILGLDI-------KGHVVKKLLVAEASDIAEEYYISFLLDRSNRTYLAMCSVEGGMEIEEVAATKPDRLAKVPVNAVKGVDLAFAREIAEKGHLPAEVLDA--AAVTIQKLWEVFTKEDATLVEVNPLVRTPDDQILALDGKVTLDANADFRQ 218 HSP 2 Score: 46.9802 bits (110), Expect = 2.329e-24 Identity = 19/40 (47.50%), Postives = 29/40 (72.50%), Query Frame = 1 Query: 628 DPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKY 747 DP + A + D+NY+ LDGE+G + NGAGL ++T+D+ Y Sbjct: 231 DPLELKAKENDLNYVKLDGEVGIIGNGAGLVMSTLDVVAY 270
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_MYCTU (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Mycobacterium tuberculosis GN=sucC PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 3.031e-24 Identity = 58/194 (29.90%), Postives = 99/194 (51.03%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDG--LAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQ 593 + ++V Q+ GGRG K+G G + ++ + + +LG + +G IV K+ + E + E Y + +LDR + + +GG IE++A P + KVP++ G+ + A + + L +V D A + KL++LF D TL+E+NPL +T +++A DAK+ D NA FRQ Sbjct: 40 RPVMVKAQVKIGGRG----KAG--GVKYAATPQDAYEHAKNILGLDI-------KGHIVKKLLVAEASDIAEEYYLSFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVNAVKGVDLDFARSIAEQGHLPAEVLDT--AAVTIAKLWELFVAEDATLVEVNPLVRTPDHKILALDAKITLDGNADFRQ 218 HSP 2 Score: 45.8246 bits (107), Expect = 3.031e-24 Identity = 18/40 (45.00%), Postives = 29/40 (72.50%), Query Frame = 1 Query: 628 DPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKY 747 DP + A + D+NY+ LDG++G + NGAGL ++T+D+ Y Sbjct: 231 DPLELKAKEHDLNYVKLDGQVGIIGNGAGLVMSTLDVVAY 270
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_MYCTA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=sucC PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 3.031e-24 Identity = 58/194 (29.90%), Postives = 99/194 (51.03%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDG--LAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQ 593 + ++V Q+ GGRG K+G G + ++ + + +LG + +G IV K+ + E + E Y + +LDR + + +GG IE++A P + KVP++ G+ + A + + L +V D A + KL++LF D TL+E+NPL +T +++A DAK+ D NA FRQ Sbjct: 40 RPVMVKAQVKIGGRG----KAG--GVKYAATPQDAYEHAKNILGLDI-------KGHIVKKLLVAEASDIAEEYYLSFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVNAVKGVDLDFARSIAEQGHLPAEVLDT--AAVTIAKLWELFVAEDATLVEVNPLVRTPDHKILALDAKITLDGNADFRQ 218 HSP 2 Score: 45.8246 bits (107), Expect = 3.031e-24 Identity = 18/40 (45.00%), Postives = 29/40 (72.50%), Query Frame = 1 Query: 628 DPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKY 747 DP + A + D+NY+ LDG++G + NGAGL ++T+D+ Y Sbjct: 231 DPLELKAKEHDLNYVKLDGQVGIIGNGAGLVMSTLDVVAY 270
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_ROSS1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Roseiflexus sp. (strain RS-1) GN=sucC PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.032e-24 Identity = 55/191 (28.80%), Postives = 92/191 (48.17%), Query Frame = 3 Query: 24 LVVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQV-KKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 +VV Q+ GGRG GGV + E+ E ++ ++LG + +G V KV + E ++ E+Y ++DR + +++ ++GG IE++A P IVKV G+ D A + G+ + Q+ LY+ + + D +L EINPL + L A D+K+ DD+ FR Sbjct: 42 VVVKAQVFVGGRGKA-------GGVKLADTPEQAEQVASQILGMNI-------KGLTVEKVLVAEAITYEREIYLGAIMDRASRRIVMMASAEGGVEIEEVARTNPEAIVKVAAHPMMGLLDFQARDLAYGIGLTDGRQARQFAQIATALYRAYMDVDASLAEINPLVVRADGSLQALDSKIVLDDSGLFR 218 HSP 2 Score: 51.9878 bits (123), Expect = 3.032e-24 Identity = 25/37 (67.57%), Postives = 28/37 (75.68%), Query Frame = 1 Query: 646 ADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756 A +A I YI LDG IGCMVNGAGLA+ATMD+ K G Sbjct: 238 AREAGITYIKLDGNIGCMVNGAGLAMATMDVVKLYGG 274 The following BLAST results are available for this feature:
BLAST of EY659243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659243 ID=EY659243; Name=EY659243; organism=Citrus sinensis; type=EST; length=836bpback to top |