EY659243
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_HERA2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=sucC PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 4.221e-23 Identity = 57/191 (29.84%), Postives = 90/191 (47.12%), Query Frame = 3 Query: 24 LVVNIQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKK-LYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 + V Q+ GGRG GG+ + E D +LG + +G V KV + E ++ E+Y ++LDR T ++I S+GG IE++A+ P+ I+K+ D G+ A ++ + A + + LY+ F E+D L EINPL QL A D+K+ DD+ FR Sbjct: 42 VAVKAQVHVGGRGKA-------GGIKLANTPAEAFDAGKAILGMDI-------KGLTVEKVLVAEAITFEKEIYLGVILDRATKRVVLIASSEGGVEIEEVAKINPDAIIKLAADPLLGLQPYQAQELAYSIGITDAKQARQFSSIATGLYRAFVENDAELAEINPLVVLPNGQLQALDSKIVLDDSGLFR 218 HSP 2 Score: 46.595 bits (109), Expect = 4.221e-23 Identity = 21/39 (53.85%), Postives = 27/39 (69.23%), Query Frame = 1 Query: 640 VAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756 + A + + +I LDG IGCMVNGAGLA+ATMD+ G Sbjct: 236 IKARENGLTFIKLDGNIGCMVNGAGLAMATMDVVNLFGG 274
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_PASMU (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pasteurella multocida GN=sucC PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.453e-23 Identity = 85/271 (31.37%), Postives = 136/271 (50.18%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWRN----WLHGEWCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 V Q+ AGGRG GGV +V+ E EV + + LGQ LVT QT G+ V+ +Y+ E S+ E+Y +LDR + + + ++GG +IE++AEK P+++ K+ ID G + LA K+ + D I+Q ++ K+F E D LLE+NPL T L+ DAK+ D NA +RQ ++ +S ++L+++ ++G ++ G I++HGG A L++GG K R E Sbjct: 44 VAKCQVHAGGRGKA-------GGVKLVRNEAEVRAFADQWLGQRLVTFQTDVNGQPVNTLYVEEGSSIARELYLGAVLDRASQRVVFMVSTEGGVNIEEVAEKTPHLLHKMAIDPLTGGMPYQGRE----LAFKLGLKGDQIKQFAHIFVQMAKMFVEKDLALLEVNPLVVTKEGNLLCLDAKIVVDSNALYRQPALKAMQDPSQEDPREALAES-HQLNYVALEGNIGCMVNG--AGLAMGTMDIIKLHGGQPANFLDVGGGATKERVAE 300
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_FRAP2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=sucC PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.453e-23 Identity = 81/271 (29.89%), Postives = 133/271 (49.08%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKL-SLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWRN----WLHGEWCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 K VV Q+ AGGRG GGV +VK +E +++ ++G LVT QT +G+ V+ V + E + + E+Y ++DR + + ++GG IE++A P I+KV +D G+ A +V L + ND ++ + YK F E D L EINPLA ++V D K+N D NA +R + LL + + S ++L+++ ++G ++ IQ++GG A L++GG K R +E Sbjct: 41 KFAVVKAQVHAGGRGKA-------GGVKVVKSSQEAREVAESLIGTNLVTFQTDAEGQPVNSVGVFEDVYPVTRELYLGAVVDRSSRKVTFMASTEGGVDIEEVAHNTPEKILKVEVDPLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFVECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPK-LLALRDKSQENAKELKASEHELNYVALEGNIGCMVNG--AGLAMATMDIIQLYGGKPANFLDVGGGATKERVIE 301
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_RUBXD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=sucC PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 5.491e-23 Identity = 57/192 (29.69%), Postives = 103/192 (53.65%), Query Frame = 3 Query: 24 LVVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKV--VDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 + V Q+L GGRG GG+ + + EE E+ + ++LG + +G V ++ + + E+Y + M+DR++ P+I+ ++GG IE++AE+ P IV++ +D G+ ++ GL+ + A D V+ LY+ F D +L+EINPL T ++VA DAK+ D+++ +R Sbjct: 42 VAVKAQVLTGGRGKA-------GGIKVAESPEEAEEAARRILGMDI-------RGHTVRRLLIESGADIERELYLSAMVDRESRRPLILFSTEGGVDIEEVAERSPGSIVRLHVDPLVGLLPYQVRELTFASGLSGETA--KDFGRAVQNLYEAFRGIDASLVEINPLVVTGEGEVVALDAKVTVDNSSLYR 217 HSP 2 Score: 40.0466 bits (92), Expect = 5.491e-23 Identity = 15/37 (40.54%), Postives = 26/37 (70.27%), Query Frame = 1 Query: 628 DPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDI 738 DP+ A + + Y+ LDG++G + NGAGL ++T+D+ Sbjct: 231 DPQEHRAQEVGLQYVKLDGDVGILGNGAGLVMSTLDV 267
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_PYRIL (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=sucC PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 7.144e-23 Identity = 53/192 (27.60%), Postives = 96/192 (50.00%), Query Frame = 3 Query: 24 LVVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 +V+ Q++ GRG GG+ I + EE +LS KM G + +G +V K+Y+ + + + EMY ++++DR + + + GG IE++A+ P I KV +D G+ D ++ G P ++ +Y++ + D L+E NPLA + +++ DA++ DDNA F+ Sbjct: 42 VVLKAQVVVAGRGKA-------GGIKIAQTPEEAYELSKKMFGMNI-------KGLVVRKLYVTKYVEVEREMYLSLIIDRASRRYLFLASPIGGVDIEEIAKTSPEKIKKVYVDPSIGLRDYHIRSIISWLGFKPGSQQWQQTASVIQAMYRIMVDYDAELVETNPLALSKEGEVIPLDARVIVDDNALFK 219 HSP 2 Score: 42.3578 bits (98), Expect = 7.144e-23 Identity = 21/50 (42.00%), Postives = 31/50 (62.00%), Query Frame = 1 Query: 622 QDDPRYVA-----ADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756 ++DPR + A K +Y+ LDG+IG + NGAGL +ATMD+ + G Sbjct: 228 EEDPRDITEFEAYAKKIGFHYVELDGDIGIIGNGAGLTMATMDLVYHFGG 277
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_VIBCM (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Vibrio cholerae serotype O1 (strain M66-2) GN=sucC PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.596e-23 Identity = 87/273 (31.87%), Postives = 134/273 (49.08%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWRNWLHG------EWCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 VV Q+ AGGRG GGV + KE V+ + K LG+ LVT QT G+ VSK+ + E ++ NE+Y ++DR T + + ++GG IE +AE+ P +I K ID G + LA K+ + D I+Q K++ ++F + D LLEINPL T+ L+ D K+N D NA +RQ + L + A + ++L+++ L G ++ G + +HGG A L++GG K R E Sbjct: 44 VVKCQVHAGGRGKA-------GGVELHDTKEGVKAFAQKWLGKNLVTYQTDANGQPVSKILVEEASNIANELYLGAVVDRSTRRIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRE----LAFKLGLQGDQIKQFVKIFMGLGEMFAQYDLALLEINPLVITAEGNLLCLDGKINIDSNAMYRQPK-LRQMHDASQEDAREAHAAKWELNYVA----LDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVAE 300
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_VIBCH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Vibrio cholerae GN=sucC PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.596e-23 Identity = 87/273 (31.87%), Postives = 134/273 (49.08%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWRNWLHG------EWCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 VV Q+ AGGRG GGV + KE V+ + K LG+ LVT QT G+ VSK+ + E ++ NE+Y ++DR T + + ++GG IE +AE+ P +I K ID G + LA K+ + D I+Q K++ ++F + D LLEINPL T+ L+ D K+N D NA +RQ + L + A + ++L+++ L G ++ G + +HGG A L++GG K R E Sbjct: 44 VVKCQVHAGGRGKA-------GGVELHDTKEGVKAFAQKWLGKNLVTYQTDANGQPVSKILVEEASNIANELYLGAVVDRSTRRIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRE----LAFKLGLQGDQIKQFVKIFMGLGEMFAQYDLALLEINPLVITAEGNLLCLDGKINIDSNAMYRQPK-LRQMHDASQEDAREAHAAKWELNYVA----LDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVAE 300
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_VIBC3 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=sucC PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.596e-23 Identity = 87/273 (31.87%), Postives = 134/273 (49.08%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWRNWLHG------EWCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 VV Q+ AGGRG GGV + KE V+ + K LG+ LVT QT G+ VSK+ + E ++ NE+Y ++DR T + + ++GG IE +AE+ P +I K ID G + LA K+ + D I+Q K++ ++F + D LLEINPL T+ L+ D K+N D NA +RQ + L + A + ++L+++ L G ++ G + +HGG A L++GG K R E Sbjct: 44 VVKCQVHAGGRGKA-------GGVELHDTKEGVKAFAQKWLGKNLVTYQTDANGQPVSKILVEEASNIANELYLGAVVDRSTRRIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRE----LAFKLGLQGDQIKQFVKIFMGLGEMFAQYDLALLEINPLVITAEGNLLCLDGKINIDSNAMYRQPK-LRQMHDASQEDAREAHAAKWELNYVA----LDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVAE 300
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_MANSM (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Mannheimia succiniciproducens (strain MBEL55E) GN=sucC PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 9.921e-23 Identity = 85/271 (31.37%), Postives = 134/271 (49.45%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWRN----WLHGEWCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 V Q+ AGGRG GGV +VK +EEV K LGQ LVT QT +G+ V+ +Y+ ++ E+Y +LDR + + + ++GG +IE++AEK P+++ K+PID G + LA K+ + I+Q +++ K+F E D +LLEINPL QL DAK+ D NA +RQ L + + L+++ ++G ++ G +++HGG A L++GG K R E Sbjct: 44 VAKCQVHAGGRGKA-------GGVKLVKSEEEVRSFFEKFLGQRLVTFQTDAKGQPVNAIYMEACANVKKELYLGAVLDRSSQRIVFMVSTEGGVNIEEVAEKTPHLLHKMPIDPLVGAMPYQGRE----LAFKLGLQGKQIQQFAQIFCQLGKMFVEKDLSLLEINPLVILDNDQLHCLDAKIVVDGNALYRQPE-LNAMRDPSQEDAREAAAEQWHLNYVALEGNIGCMVNG--AGLAMGTMDIVKLHGGQPANFLDVGGGTTKERVAE 300
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_HAES2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Haemophilus somnus (strain 2336) GN=sucC PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.296e-22 Identity = 86/273 (31.50%), Postives = 130/273 (47.62%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWRNWLHG------EWCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 + QI AGGRG GGV +VK +EV K LGQ LVT QT QG+ + ++YL + E+Y + ++DR + + + S+GG IE++AEK P+++ +V ID G + LA K+ I+Q +++ KLF E D +LLEINPL +L DAK+ DDNA +R L + + L+++ L G ++ G I++HGG A L++GG K R +E Sbjct: 44 IAKCQIHAGGRGKA-------GGVKVVKSAQEVRSFFTKFLGQRLVTVQTNEQGQPIHQIYLEPCAEIQKELYLSAIIDRSSQRIVFMASSEGGMDIEEVAEKTPHLLHRVTIDPLVGAMPYQGRE----LAFKLGLSGKQIQQFSQIFCQLAKLFVEKDLSLLEINPLVILKNDELFCLDAKVVVDDNALYRH-PDLFSMRDLTQEDPREAEAEKWNLNYVA----LDGNIGCMVNGAGLAMGTMDIIKLHGGRPANFLDVGGGATKERVME 300 The following BLAST results are available for this feature:
BLAST of EY659243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659243 ID=EY659243; Name=EY659243; organism=Citrus sinensis; type=EST; length=836bpback to top |