EY659243
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_HAES1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Haemophilus somnus (strain 129Pt) GN=sucC PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.296e-22 Identity = 86/273 (31.50%), Postives = 130/273 (47.62%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWRNWLHG------EWCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 + QI AGGRG GGV +VK +EV K LGQ LVT QT QG+ + ++YL + E+Y + ++DR + + + S+GG IE++AEK P+++ +V ID G + LA K+ I+Q +++ KLF E D +LLEINPL +L DAK+ DDNA +R L + + L+++ L G ++ G I++HGG A L++GG K R +E Sbjct: 44 IAKCQIHAGGRGKA-------GGVKVVKSAQEVRSFFTKFLGQRLVTVQTNEQGQPIHQIYLEPCAEIQKELYLSAIIDRSSQRIVFMASSEGGMDIEEVAEKTPHLLHRVTIDPLVGAMPYQGRE----LAFKLGLSGKQIQQFSQIFCQLAKLFVEKDLSLLEINPLVILKNDELFCLDAKVVVDDNALYRH-PDLFSMRDLTQEDPREAEAEKWNLNYVA----LDGNIGCMVNGAGLAMGTMDIIKLHGGRPANFLDVGGGATKERVME 300
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_HAEPS (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=sucC PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.296e-22 Identity = 89/271 (32.84%), Postives = 131/271 (48.34%), Query Frame = 3 Query: 30 VNIQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVK----KLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWRNWLHGEWCRI-----SFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 + Q+ AGGRG GGV +V+ E EV + + K LG+ LVT QT G+ V+ +Y+ E + E+Y ++DR + + + S GG +IE++A K P ++ KV ID G A LA K+ D I+Q +L KLF E D +LLEINPL T+ L+ DAK+ D NA +RQ L H S ++ + H L + C + + G +++HGG A L++GG K R E Sbjct: 45 IKCQVHAGGRGKA-------GGVKLVRNEAEVREFADKWLGKRLVTFQTDANGQPVNTLYVEETAGIARELYLGAVIDRSSQKVVFMASSAGGMNIEEVAAKTPELLHKVAIDPLVG----GMAYQGRELAFKLGLTGDQIKQFSFIFTQLAKLFVEKDLSLLEINPLVVTTEGNLLCLDAKMVVDGNALYRQPE--LAAMHD--PSQDDPREALAESHQLNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGFPANFLDVGGGATKERVAE 300
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_HALSA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Halobacterium salinarium GN=sucC PE=3 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 1.574e-22 Identity = 58/191 (30.37%), Postives = 95/191 (49.74%), Query Frame = 3 Query: 24 LVVNIQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQ 593 + V Q+ GGRG GG+ + + E + + +LG L +G V +V + E + NE+Y + +DR P+++ +GG IE +AE+ P IV+ +D G+ A V + D + V+ +Y L+ +SD T +EINP+ TS + +VAADA + D++A FRQ Sbjct: 42 VAVKAQVHVGGRGKA-------GGIKLAENTAEAREAAESILGMDL-------KGYTVDRVLVEEAVDFTNELYVGVTMDRSEGAPVVMVSERGGVDIESVAEEAPEDIVREHVDPSFGLQAYQARNAVYDAGIEQDVAGDVAKIVQGVYDLWADSDATEVEINPVMVTSERDVVAADAVMKLDEDALFRQ 218 HSP 2 Score: 36.1946 bits (82), Expect = 1.574e-22 Identity = 16/44 (36.36%), Postives = 25/44 (56.82%), Query Frame = 1 Query: 625 DDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756 +D A++ +Y+ LDG G + NGAGL + T+D+ Y G Sbjct: 230 EDDLEAKANEYGFDYVRLDGNTGIIGNGAGLVMTTLDLVDYYGG 273
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_HALS3 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=sucC PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.574e-22 Identity = 58/191 (30.37%), Postives = 95/191 (49.74%), Query Frame = 3 Query: 24 LVVNIQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQ 593 + V Q+ GGRG GG+ + + E + + +LG L +G V +V + E + NE+Y + +DR P+++ +GG IE +AE+ P IV+ +D G+ A V + D + V+ +Y L+ +SD T +EINP+ TS + +VAADA + D++A FRQ Sbjct: 42 VAVKAQVHVGGRGKA-------GGIKLAENTAEAREAAESILGMDL-------KGYTVDRVLVEEAVDFTNELYVGVTMDRSEGAPVVMVSERGGVDIESVAEEAPEDIVREHVDPSFGLQAYQARNAVYDAGIEQDVAGDVAKIVQGVYDLWADSDATEVEINPVMVTSERDVVAADAVMKLDEDALFRQ 218 HSP 2 Score: 36.1946 bits (82), Expect = 1.574e-22 Identity = 16/44 (36.36%), Postives = 25/44 (56.82%), Query Frame = 1 Query: 625 DDPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756 +D A++ +Y+ LDG G + NGAGL + T+D+ Y G Sbjct: 230 EDDLEAKANEYGFDYVRLDGNTGIIGNGAGLVMTTLDLVDYYGG 273
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_VIBVY (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Vibrio vulnificus (strain YJ016) GN=sucC PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.886e-22 Identity = 86/276 (31.16%), Postives = 132/276 (47.83%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWR-NW--LHG------EWCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 VV Q+ AGGRG GGV + KE V++ + K LG+ LVT QT G+ V+K+ + E ++ NE+Y ++DR T + + ++GG IE +AE+ P +I K ID G + LA K+ + D I+Q K++ ++F + D LLEINPL T L+ D K+N D NA +RQ + ++ + + H W N+ L G ++ G + +HGG A L++GG K R E Sbjct: 44 VVKCQVHAGGRGKA-------GGVELHDTKEGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYLGAVVDRATRKVVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRE----LAFKLGLQGDQIKQFVKIFMGLGEMFTQYDLALLEINPLVITGEGNLLCLDGKINIDSNALYRQPKLREMHDPSQ--------EDKREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVAE 300
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_VIBVU (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Vibrio vulnificus GN=sucC PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.886e-22 Identity = 86/276 (31.16%), Postives = 132/276 (47.83%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWR-NW--LHG------EWCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 VV Q+ AGGRG GGV + KE V++ + K LG+ LVT QT G+ V+K+ + E ++ NE+Y ++DR T + + ++GG IE +AE+ P +I K ID G + LA K+ + D I+Q K++ ++F + D LLEINPL T L+ D K+N D NA +RQ + ++ + + H W N+ L G ++ G + +HGG A L++GG K R E Sbjct: 44 VVKCQVHAGGRGKA-------GGVELHDTKEGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYLGAVVDRATRKVVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRE----LAFKLGLQGDQIKQFVKIFMGLGEMFTQYDLALLEINPLVITGEGNLLCLDGKINIDSNALYRQPKLREMHDPSQ--------EDKREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVAE 300
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_PSEA6 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=sucC PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.886e-22 Identity = 84/271 (31.00%), Postives = 127/271 (46.86%), Query Frame = 3 Query: 21 ELVVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWRNWLHG------EWCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 E VV Q+ AGGRG GGV +VK K+E++ + K LGQ LVT QT G+ VSK+ + + E+Y ++DR + + + ++GG IE +AE+ P I+K ID G A ++ L K + L KLF E D L+E+NPL L DAK+ D NAA+RQ + L + + ++L+++ L G ++ G + +HGG+ A L++GG K R E Sbjct: 42 EWVVKCQVHAGGRGKA-------GGVKLVKNKDEIKAFAQKWLGQNLVTYQTDEAGQPVSKILVESCTDIAQELYLGAVVDRASRRVVFMASTEGGVEIETVAEETPEKILKAEIDPLVGAQPYQAREIAFKLGLKGVQIKQFTQIFMGLAKLFEEKDIALIEVNPLVIKDDGNLHCLDAKVAMDSNAAYRQPK-LQEMHDPSQEDAREAQAAKWELNYVA----LDGNIGCMVNGAGLAMGTMDIVNLHGGSPANFLDVGGGATKERVAE 300
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_VIBFM (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Vibrio fischeri (strain MJ11) GN=sucC PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.770e-22 Identity = 86/276 (31.16%), Postives = 131/276 (47.46%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWR-NW--LHG------EWCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 VV Q+ AGGRG GGV + KE V++ + K LG+ LVT QT G+ VSK+ + E ++ NE+Y ++DR + + + ++GG IE +AE+ P +I K ID G + LA K+ D I+Q K++ +F + D LLEINPL T+ L+ D K+N D NA +RQ + ++ + + H W N+ L G ++ G + +HGG A L++GG K R E Sbjct: 44 VVKCQVHAGGRGKA-------GGVELHDTKEGVKEFAQKWLGKNLVTFQTDANGQPVSKILVEEASNIANELYLGAVVDRASQRIVFMASTEGGVDIEKIAEETPELIHKAAIDPLVGPQAYQGRE----LAFKLGLEGDQIKQFVKIFMGLGNMFAQYDLALLEINPLVVTAEGSLLCLDGKINIDSNAMYRQPKLREMHDPSQ--------EDEREAHAAQWELNYVALDGSIGCMVNGAGLAMGTMDIVNLHGGQPANFLDVGGGATKERVTE 300
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_VIBF1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=sucC PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.770e-22 Identity = 86/276 (31.16%), Postives = 131/276 (47.46%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWR-NW--LHG------EWCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 VV Q+ AGGRG GGV + KE V++ + K LG+ LVT QT G+ VSK+ + E ++ NE+Y ++DR + + + ++GG IE +AE+ P +I K ID G + LA K+ D I+Q K++ +F + D LLEINPL T+ L+ D K+N D NA +RQ + ++ + + H W N+ L G ++ G + +HGG A L++GG K R E Sbjct: 44 VVKCQVHAGGRGKA-------GGVELHDTKEGVKEFAQKWLGKNLVTFQTDANGQPVSKILVEEASNIANELYLGAVVDRASQRIVFMASTEGGVDIEKIAEETPELIHKAAIDPLVGPQAYQGRE----LAFKLGLEGDQIKQFVKIFMGLGNMFAQYDLALLEINPLVVTAEGSLLCLDGKINIDSNAMYRQPKLREMHDPSQ--------EDEREAHAAQWELNYVALDGSIGCMVNGAGLAMGTMDIVNLHGGQPANFLDVGGGATKERVTE 300
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_HAHCH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Hahella chejuensis (strain KCTC 2396) GN=sucC PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.924e-22 Identity = 86/276 (31.16%), Postives = 131/276 (47.46%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWR-NWLHGE--------WCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 VV Q+ AGGRG GGV +V KEE++ + K LG LVT QT +G+ V+K+ + + E+Y ++DR T + + ++GG IE +AE+ P I+K ID G A + LA + +D ++Q K++ KLF + D LLE+NPL T G L DAK+ D NA +RQ R ++ + + H W N++ E ++ G +++HGG A L++GG K R E Sbjct: 44 VVKAQVHAGGRGKA-------GGVKLVSSKEEIKAFAEKWLGHNLVTYQTDEKGQPVNKILVESCTDIDQELYLGAVMDRGTRRIVFMASTEGGVEIEKVAEETPEKILKAVIDPLVGAQPYQARE----LAFALGLNSDQVKQFTKIFLGLAKLFQDLDLALLEVNPLVITKGGNLHCLDAKVVVDGNALYRQPRIRDMHDPSQ--------EDPREAHAAKWELNYVALEGNIGCMVNGAGLAMGTMDIVKLHGGAPANFLDVGGGATKERVTE 300 The following BLAST results are available for this feature:
BLAST of EY659243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659243 ID=EY659243; Name=EY659243; organism=Citrus sinensis; type=EST; length=836bpback to top |