EY659243
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_VIBHB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=sucC PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.871e-21 Identity = 85/276 (30.80%), Postives = 130/276 (47.10%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWR-NW--LHG------EWCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 VV Q+ AGGRG GGV + K+ V++ + K LG+ LVT QT G+ V+K+ + E ++ NE+Y ++DR T + + ++GG IE +AE+ P +I K ID G + LA K+ D I+Q K++ +F + D LLEINPL T L+ D K+N D NA +RQ + ++ + + H W N+ L G ++ G + +HGG A L++GG K R E Sbjct: 44 VVKCQVHAGGRGKA-------GGVELHDTKDGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYLGAVVDRATRKIVFMASTEGGVEIEKVAEETPELIHKAAIDPLVGPQAYQGRE----LAFKLGLEGDQIKQFVKIFMGLGTMFSQYDLALLEINPLVITGEGNLLCLDGKINIDSNALYRQPKLREMHDPSQ--------EDEREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVAE 300
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_HAEIN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Haemophilus influenzae GN=sucC PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.871e-21 Identity = 79/265 (29.81%), Postives = 127/265 (47.92%), Query Frame = 3 Query: 39 QILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWRNWLHGE------WCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 Q+ AGGRG GGV +V+ EE + K LGQ LVT QT G+ V+++Y E + E Y + ++DR + + I S+GG +IE++ + P+++ KV ID G ++ L + L +LF E D +LLE+NPL T LV DAK++ DDNA FR + LL + + ++L+++ L G+ ++ G ++++GG A L++GG + R E Sbjct: 48 QVHAGGRGKA-------GGVKLVQDVEEARAFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYLSAVVDRTSQKVVFIASSEGGMNIEEVVQNSPHLLHKVTIDPLFGGLPYQGRELAFKLGLSGTQNKQFTDIFMGLSRLFLEKDLSLLEVNPLVLTPQGNLVCLDAKISVDDNALFRH-KDLLALQDLTQNDAREAEAEKFQLNYVA----LEGDIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVGGGATQERVAE 300
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_MYCLE (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Mycobacterium leprae GN=sucC PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 2.842e-21 Identity = 60/200 (30.00%), Postives = 95/200 (47.50%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKT------SGKQLVAADAKLNFDDNAAFRQ 593 + ++V Q+ GGRG K+G G + EE + +LG + +G IV K+ + E + E Y + +LDR + + +GG IE++A P + KV +D G+ A + L +V D A + KL++LF D TL+E+NPL +T S +++A D K+ D NA FRQ Sbjct: 40 RPVMVKAQVKTGGRG----KAG--GVKYAATPEEAYQQAKNILGLDI-------KGHIVKKLLVVEASDIAEEYYLSFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVSVDAVKGVDLACARSIAQQGHLPAEVLDA--AAATIAKLWELFVAEDATLVEVNPLVRTPSRGYGSSGKILALDGKVTLDANARFRQ 224 HSP 2 Score: 43.1282 bits (100), Expect = 2.842e-21 Identity = 19/40 (47.50%), Postives = 27/40 (67.50%), Query Frame = 1 Query: 628 DPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKY 747 DP A + ++NYI LDGE+G + NGAGL ++T D+ Y Sbjct: 237 DPLEWKAKQHNLNYIKLDGEVGIIGNGAGLTMSTFDVVAY 276
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_MYCLB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Mycobacterium leprae (strain Br4923) GN=sucC PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 2.842e-21 Identity = 60/200 (30.00%), Postives = 95/200 (47.50%), Query Frame = 3 Query: 18 KELVVNIQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKT------SGKQLVAADAKLNFDDNAAFRQ 593 + ++V Q+ GGRG K+G G + EE + +LG + +G IV K+ + E + E Y + +LDR + + +GG IE++A P + KV +D G+ A + L +V D A + KL++LF D TL+E+NPL +T S +++A D K+ D NA FRQ Sbjct: 40 RPVMVKAQVKTGGRG----KAG--GVKYAATPEEAYQQAKNILGLDI-------KGHIVKKLLVVEASDIAEEYYLSFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVSVDAVKGVDLACARSIAQQGHLPAEVLDA--AAATIAKLWELFVAEDATLVEVNPLVRTPSRGYGSSGKILALDGKVTLDANARFRQ 224 HSP 2 Score: 43.1282 bits (100), Expect = 2.842e-21 Identity = 19/40 (47.50%), Postives = 27/40 (67.50%), Query Frame = 1 Query: 628 DPRYVAADKADINYIGLDGEIGCMVNGAGLALATMDIFKY 747 DP A + ++NYI LDGE+G + NGAGL ++T D+ Y Sbjct: 237 DPLEWKAKQHNLNYIKLDGEVGIIGNGAGLTMSTFDVVAY 276
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_NATPD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=sucC PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.844e-21 Identity = 56/190 (29.47%), Postives = 99/190 (52.11%), Query Frame = 3 Query: 24 LVVNIQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 + + Q+ GGRG GG+ +V+ +E + + ++LG L +G V +V + + +E+Y + +DR P+ + ++GG +IE++AE+ P+ IV+ ID G+ A K A ND + +LY+L+ + D T +E+NPL T +++AADA +N D++A FR Sbjct: 42 VAIKAQVQVGGRGKA-------GGIKLVENADEAREAADEILGMDL-------KGLHVDRVLVEAAVDFTDELYVGVTMDRAAGKPVAMVSTRGGVNIEEVAEEDPDAIVREHIDPAFGMHPFQARKAAFEAGVDRAVANDVASILTQLYELWADKDATEIEVNPLMVTDDDEVIAADAVMNIDEDALFR 217 HSP 2 Score: 31.187 bits (69), Expect = 2.844e-21 Identity = 13/37 (35.14%), Postives = 22/37 (59.46%), Query Frame = 1 Query: 646 ADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756 A++ +Y+ L G G + NGAGL + T+D+ + G Sbjct: 237 ANEYGFDYVRLSGNTGIIGNGAGLVMTTLDLVDHYGG 273
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_HALLT (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=sucC PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.844e-21 Identity = 55/188 (29.26%), Postives = 99/188 (52.66%), Query Frame = 3 Query: 30 VNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFR 590 + Q+ GGRG GG+ I ++E E + ++LG L +G V ++ + + + V+E+Y + +DR P+++ ++GG +IE++AE+ P+ I + +D G+ A KVV D + LY L+ E+D + +E+NP+ TS + ++AADA +N D++A FR Sbjct: 44 IKAQVHVGGRGKA-------GGIKIATDRDEAEQYAEEILGMDL-------KGYTVDQILVEQGVDFVDELYVGVTMDRGEGQPVLMVSTEGGVNIEEVAEENPDAIAREHVDPAFGLHPYQARKVVYEAGVDADVALDVASILTTLYDLYEENDASEIEVNPVMITSDRDVIAADAVMNIDEDALFR 217 HSP 2 Score: 33.8834 bits (76), Expect = 2.844e-21 Identity = 14/37 (37.84%), Postives = 22/37 (59.46%), Query Frame = 1 Query: 646 ADKADINYIGLDGEIGCMVNGAGLALATMDIFKYMVG 756 A + +Y+ L G +G + NGAGL + T+D+ Y G Sbjct: 237 AGEYGFDYVRLSGNVGIIGNGAGLVMTTLDLVDYYGG 273
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_VIBSL (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Vibrio splendidus (strain LGP32) GN=sucC PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.168e-21 Identity = 85/276 (30.80%), Postives = 131/276 (47.46%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWR-NW--LHG------EWCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 VV Q+ AGGRG GGV + KE V++ + K LG+ LVT QT G+ V+K+ + E ++ NE+Y ++DR T + + ++GG IE +AE+ P +I + ID G + LA K+ D I+Q K++ ++F + D LLEINPL T L+ D K+N D NA +RQ + ++ + + H W N+ L G ++ G + +HGG A L++GG K R E Sbjct: 44 VVKCQVHAGGRGKA-------GGVELHDTKEGVKEFAQKWLGKNLVTYQTDANGQPVTKILVEEASNIANELYLGAVVDRATRKIVFMASTEGGVDIEKIAEETPELIHQSAIDPLVGPQAYQGRE----LAFKLGLVGDQIKQFVKIFMGLGQMFSQYDLALLEINPLVITGEGNLLCLDGKINIDSNAMYRQPKLREMHDPSQ--------EDEREAHAAQWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVAE 300
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_SACD2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=sucC PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.444e-21 Identity = 83/272 (30.51%), Postives = 123/272 (45.22%), Query Frame = 3 Query: 27 VVNIQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWR-NW--LHG------EWCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 VV Q+ AGGRG GGV +V K E+E+ + K LG L+T QT G+ VS++ + + +E+Y ++DR T I + ++GG IE +AE+ P I+K ID G A ++ L + L K+F + D LLEINPL T L DAK+ D NA +RQ ++ + + H W N+ L G ++ G +++HGG A L++GG K R VE Sbjct: 44 VVKAQVHAGGRGKA-------GGVKLVSSKAEIEEFAKKWLGNNLITYQTDENGQPVSRILVESCTDIADELYLGAVVDRSTRRVIFMASTEGGVEIEKVAEETPEKILKAIIDPLTGAQPYQARELGFKLGLNPVQIKQFTQIFLGLAKMFVDKDLALLEINPLVITDEGNLHCLDAKVAIDGNAMYRQPALKEMHDPSQ--------EDEREAHAAKWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGQPANFLDVGGGATKERVVE 300
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_HAEIG (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Haemophilus influenzae (strain PittGG) GN=sucC PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.110e-21 Identity = 79/265 (29.81%), Postives = 124/265 (46.79%), Query Frame = 3 Query: 39 QILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWRNWLHGE------WCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 Q+ AGGRG GGV +V+ EE + K LGQ LVT QT G+ V+++Y E + E Y + ++DR + + I GG IE++A+ P+++ KV ID G ++ L A + L +LF E D +L+E+NPL T LV DAK+ DDNA FR + L + + ++L+++ L G+ ++ G ++++GG A L++GG K R E Sbjct: 48 QVHAGGRGKA-------GGVKLVQDVEEARSFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYLSAVVDRASQKVVFIASPAGGMDIEEVAQNTPHLLHKVEIDPLFGGLPYQGRELAFKLGLSDAQNKQFTDIFMGLSRLFLEKDLSLVEVNPLVLTQQGNLVCLDAKIAVDDNALFRH-KDLSALQDLTQNDAREAEAEKFQLNYVA----LEGDIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVGGGATKERVAE 300
BLAST of EY659243 vs. ExPASy Swiss-Prot
Match: SUCC_HAEIE (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Haemophilus influenzae (strain PittEE) GN=sucC PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.285e-21 Identity = 79/265 (29.81%), Postives = 123/265 (46.42%), Query Frame = 3 Query: 39 QILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLSGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAKTSGKQLVAADAKLNFDDNAAFRQIRYLLCVTHAR*SSICGC*QS*YKLHWLGWRNWLHGE------WCRISFGYHGYIQIHGGTSATPLELGGMLLKARXVE 812 Q+ AGGRG GGV +V+ EE + K LGQ LVT QT G+ V+++Y E + E Y + ++DR + + I GG IE++A+ P+++ KV ID G ++ L + L +LF E D +LLE+NPL T LV DAK+ DDNA FR + L + + ++L+++ L G+ ++ G ++++GG A L++GG K R E Sbjct: 48 QVHAGGRGKA-------GGVKLVQDVEEARSFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYLSAVVDRASQKVVFIASPAGGMDIEEVAQNTPHLLHKVEIDPLFGGLPYQGRELAFKLGLSGTQNKQFTDIFMGLSRLFLEKDLSLLEVNPLVLTQQGNLVCLDAKIAVDDNALFRH-KDLSALQDLTQNDAREAEAEKFQLNYVA----LEGDIGCMVNGAGLAMGTMDIVKLYGGKPANFLDVGGGATKERVAE 300 The following BLAST results are available for this feature:
BLAST of EY659243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659243 ID=EY659243; Name=EY659243; organism=Citrus sinensis; type=EST; length=836bpback to top |